Precursor miRBase

mmu-mir-20b (MI0003536)

Accession MI0003536
Name mmu-mir-20b
similar to following miRCarta precursors mmu-241-25640.1
Organism Mus musculus
Genome GRCm38.p5
Location chrX:52,742,113-52,742,192 (-)
miRNA mmu-miR-20b-5p
miRNA mmu-miR-20b-3p
Sequence (5' -> 3')
(80 nts)
CCUAGUAGUGCCAAAGUGCUCAUAGUGCAGGUAGUUUUUAUACCACUCUACUGCAGUGUGAGCACUUCUAGUACUCCUGG
MFE -35.50 kcal/mol
first miRBase version 8.0
last miRBase version 21.0
Clusters (10 kb)
(6 precursors)
mmu-mir-363
mmu-mir-92a-2
mmu-mir-19b-2
mmu-mir-20b
mmu-mir-18b
mmu-mir-106a
Family mir-17 (MIPF0000001)
Experiments
experiment Pubmed link
Illumina 20215419 20413612
cloned 17604727
External DBs
Gene symbol Mir20b
NCBI Gene 723923

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Sewer et al. BMC Bioinformatics 2005 16274478 Identification of clustered microRNAs using an ab initio prediction method.
2 Mineno et al. Nucleic Acids Res. 2006 16582102 The expression profile of microRNAs in mouse embryos.
3 Watanabe et al. Genes Dev. 2006 16766679 Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes.
4 Landgraf et al. Cell 2007 17604727 A mammalian microRNA expression atlas based on small RNA library sequencing.
5 Chiang et al. Genes Dev. 2010 20413612 Mammalian microRNAs: experimental evaluation of novel and previously annotated genes.
6 Ahn et al. Mol. Hum. Reprod. 2010 20215419 MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing.