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hsa-miR-548i (MIMAT0005935) (184 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-548i DDIT4
PAR-CLIP [1] [2]
hsa-miR-548i ETNK1
PAR-CLIP [3]
hsa-miR-548i RAB8B
PAR-CLIP [2]
hsa-miR-548i ACTN4
PAR-CLIP [1] [2] [4]
hsa-miR-548i PTBP1
PAR-CLIP [4]
hsa-miR-548i SLC5A3
PAR-CLIP [4] [2]
hsa-miR-548i FOXN2
PAR-CLIP [2] [4]
hsa-miR-548i MTHFD2
PAR-CLIP [1] [2] [4]
hsa-miR-548i ABHD5
PAR-CLIP [4]
hsa-miR-548i FEM1C
PAR-CLIP [5]
hsa-miR-548i UBE2D2
PAR-CLIP [4]
hsa-miR-548i BRIX1
PAR-CLIP [1]
hsa-miR-548i FAM135A
PAR-CLIP [4]
hsa-miR-548i CBX3
PAR-CLIP [2]
hsa-miR-548i FOXK1
PAR-CLIP [2]
hsa-miR-548i CLDN12
PAR-CLIP [2]
hsa-miR-548i PEG10
PAR-CLIP [2] [4] [6]
hsa-miR-548i MPZL1
PAR-CLIP [2]
hsa-miR-548i BMI1
PAR-CLIP [2]
hsa-miR-548i COMMD3-BMI1
PAR-CLIP [2]
hsa-miR-548i UBE2D1
PAR-CLIP [7] [2] [4]
hsa-miR-548i SAMD8
PAR-CLIP [5]
hsa-miR-548i PAFAH1B2
PAR-CLIP [2] [4] [3]
hsa-miR-548i CAPZA1
PAR-CLIP [1] [2] [7]
hsa-miR-548i LEPROT
PAR-CLIP [2]
hsa-miR-548i BACH1
PAR-CLIP [2]
hsa-miR-548i ZBTB38
PAR-CLIP [6]
hsa-miR-548i SMAD5
PAR-CLIP [2] [6]
hsa-miR-548i IL6ST
PAR-CLIP [6]
hsa-miR-548i CCNB1
PAR-CLIP [2] [3]
hsa-miR-548i MDFIC
PAR-CLIP [6]
hsa-miR-548i ANP32B
PAR-CLIP [1] [2]
hsa-miR-548i TBC1D13
PAR-CLIP [2]
hsa-miR-548i SH3BGRL
PAR-CLIP [4]
hsa-miR-548i HMGN2
PAR-CLIP [2] [4]
hsa-miR-548i XRCC6
PAR-CLIP [1] [2] [6]
hsa-miR-548i YAP1
PAR-CLIP [2]
hsa-miR-548i LRRC55
HITS-CLIP [4]
PAR-CLIP [1] [4]
hsa-miR-548i SPRYD4
PAR-CLIP [7]
hsa-miR-548i MAP2K1
PAR-CLIP [2]
hsa-miR-548i DR1
PAR-CLIP [4]
hsa-miR-548i RGPD4
PAR-CLIP [4]
hsa-miR-548i PDE12
PAR-CLIP [4]
hsa-miR-548i USP53
PAR-CLIP [7]
hsa-miR-548i PRRC1
PAR-CLIP [2]
hsa-miR-548i G3BP1
PAR-CLIP [2] [4]
hsa-miR-548i ZNF711
PAR-CLIP [1]
hsa-miR-548i FAM53C
PAR-CLIP [4]
hsa-miR-548i NEK7
PAR-CLIP [5]
hsa-miR-548i THRAP3
PAR-CLIP [2]
hsa-miR-548i ITGB8
HITS-CLIP [8]
hsa-miR-548i SPCS3
PAR-CLIP [4]
hsa-miR-548i WBP4
PAR-CLIP [2] [4]
hsa-miR-548i GRPEL2
PAR-CLIP [2]
hsa-miR-548i ZNRF2
PAR-CLIP [5] [1] [2] [4]
hsa-miR-548i GTF2H5
PAR-CLIP [5]
hsa-miR-548i VLDLR
PAR-CLIP [5]
hsa-miR-548i ZDHHC21
PAR-CLIP [5]
hsa-miR-548i PRPS1L1
PAR-CLIP [5]
hsa-miR-548i ZNF207
PAR-CLIP [5]
hsa-miR-548i PTCHD1
PAR-CLIP [5] [9]
hsa-miR-548i MCC
PAR-CLIP [5]
hsa-miR-548i ZNF562
PAR-CLIP [5]
hsa-miR-548i MRPS5
PAR-CLIP [5]
hsa-miR-548i TM6SF1
PAR-CLIP [5]
hsa-miR-548i PLET1
PAR-CLIP [9] [5]
hsa-miR-548i SEM1
PAR-CLIP [5]
hsa-miR-548i NECTIN3
PAR-CLIP [5]
hsa-miR-548i ANKEF1
HITS-CLIP [4] [10]
PAR-CLIP [1] [2] [4] [6] [7]
hsa-miR-548i KIF2C
PAR-CLIP [6]
hsa-miR-548i YWHAE
PAR-CLIP [1] [2] [4] [6]
hsa-miR-548i PHB2
PAR-CLIP [6]
hsa-miR-548i MTMR6
HITS-CLIP [4]
PAR-CLIP [1] [2] [4] [6]
hsa-miR-548i KLHL11
PAR-CLIP [1] [2] [4] [6]
hsa-miR-548i GTPBP2
PAR-CLIP [6]
hsa-miR-548i AGO2
PAR-CLIP [3] [6]
hsa-miR-548i ALG9
PAR-CLIP [6]
hsa-miR-548i ERH
PAR-CLIP [4] [6]
hsa-miR-548i FAM3C
PAR-CLIP [3] [6] [2]
hsa-miR-548i DDB1
PAR-CLIP [6]
hsa-miR-548i IPMK
PAR-CLIP [6]
hsa-miR-548i CEP120
PAR-CLIP [6]
hsa-miR-548i ZBTB20
PAR-CLIP [9]
hsa-miR-548i PTBP2
HITS-CLIP [10] [4]
PAR-CLIP [7] [1] [2] [4]
hsa-miR-548i TMEM30B
PAR-CLIP [7]
hsa-miR-548i SVOP
HITS-CLIP [4]
PAR-CLIP [1] [2] [4] [3] [7]
hsa-miR-548i INHBA
PAR-CLIP [4] [3] [7] [1] [2]
hsa-miR-548i TRIM37
PAR-CLIP [7]
hsa-miR-548i SPPL2A
PAR-CLIP [4] [7]
hsa-miR-548i SMG1
PAR-CLIP [2] [4] [7]
hsa-miR-548i CLIP1
PAR-CLIP [4] [7] [1] [2]
hsa-miR-548i CELSR3
PAR-CLIP [2] [4] [7]
hsa-miR-548i CDK4
PAR-CLIP [1] [2] [4] [7]
hsa-miR-548i ZNF154
HITS-CLIP [4]
PAR-CLIP [2] [4] [1]
hsa-miR-548i GRM5
PAR-CLIP [1]
hsa-miR-548i YOD1
PAR-CLIP [1]
hsa-miR-548i RSBN1
PAR-CLIP [1] [2] [4] [3]
hsa-miR-548i POLR1B
PAR-CLIP [1] [2]
hsa-miR-548i NPM3
HITS-CLIP [4]
PAR-CLIP [1] [2] [4]
hsa-miR-548i CYP20A1
PAR-CLIP [1]
hsa-miR-548i TRA2B
PAR-CLIP [1]
hsa-miR-548i TM9SF3
PAR-CLIP [1] [2] [4]
hsa-miR-548i SHISA9
PAR-CLIP [4] [3]
hsa-miR-548i ARL13B
PAR-CLIP [3]
hsa-miR-548i RBM4B
PAR-CLIP [3]
hsa-miR-548i TMEM41B
PAR-CLIP [3]
hsa-miR-548i FRY
PAR-CLIP [3]
hsa-miR-548i RAB32
PAR-CLIP [3]
hsa-miR-548i SLC9A4
PAR-CLIP [4] [3]
hsa-miR-548i PANX1
PAR-CLIP [3]
hsa-miR-548i IKZF5
PAR-CLIP [3]
hsa-miR-548i HMBOX1
PAR-CLIP [3]
hsa-miR-548i GDE1
PAR-CLIP [4] [3]
hsa-miR-548i EFNA5
PAR-CLIP [3]
hsa-miR-548i CSE1L
PAR-CLIP [4] [3]
hsa-miR-548i GPC4
PAR-CLIP [4]
hsa-miR-548i PEX7
PAR-CLIP [4]
hsa-miR-548i PARP15
PAR-CLIP [4]
hsa-miR-548i XKR9
PAR-CLIP [4]
hsa-miR-548i ESYT1
PAR-CLIP [4]
hsa-miR-548i KLRC3
PAR-CLIP [4]
hsa-miR-548i METTL8
PAR-CLIP [4]
hsa-miR-548i ANGPTL3
PAR-CLIP [4]
hsa-miR-548i ACSM2B
PAR-CLIP [4]
hsa-miR-548i PRELID1
PAR-CLIP [4]
hsa-miR-548i HIST1H2BD
PAR-CLIP [4]
hsa-miR-548i SPC25
PAR-CLIP [4]
hsa-miR-548i GIMAP4
PAR-CLIP [4]
hsa-miR-548i SIK1
PAR-CLIP [4]
hsa-miR-548i PTP4A1
PAR-CLIP [4]
hsa-miR-548i KPNA1
PAR-CLIP [2] [4]
hsa-miR-548i KATNAL1
PAR-CLIP [4]
hsa-miR-548i CRNKL1
PAR-CLIP [4]
hsa-miR-548i CHEK2
PAR-CLIP [2] [4]
hsa-miR-548i RPL7L1
PAR-CLIP [2] [4]
hsa-miR-548i TMEM241
PAR-CLIP [4]
hsa-miR-548i MKLN1
PAR-CLIP [4]
hsa-miR-548i XIAP
PAR-CLIP [2] [4]
hsa-miR-548i UBE2H
PAR-CLIP [4]
hsa-miR-548i SYNCRIP
PAR-CLIP [4]
hsa-miR-548i SIX4
PAR-CLIP [4]
hsa-miR-548i PCMTD1
PAR-CLIP [4]
hsa-miR-548i MAP2K4
PAR-CLIP [4]
hsa-miR-548i LIPA
PAR-CLIP [4]
hsa-miR-548i KLHL28
PAR-CLIP [4]
hsa-miR-548i KLF7
PAR-CLIP [4]
hsa-miR-548i HPRT1
PAR-CLIP [4]
hsa-miR-548i HOXA13
PAR-CLIP [4]
hsa-miR-548i GPR27
PAR-CLIP [4] [2]
hsa-miR-548i ENPP5
PAR-CLIP [4]
hsa-miR-548i ATP5G3
PAR-CLIP [4]
hsa-miR-548i ZWINT
PAR-CLIP [2]
hsa-miR-548i ZBTB43
PAR-CLIP [2]
hsa-miR-548i MSANTD4
PAR-CLIP [2]
hsa-miR-548i MFSD9
PAR-CLIP [2]
hsa-miR-548i TNIP2
PAR-CLIP [2]
hsa-miR-548i BBS10
PAR-CLIP [2]
hsa-miR-548i KIF3A
PAR-CLIP [2]
hsa-miR-548i KIAA1586
PAR-CLIP [2]
hsa-miR-548i NHS
PAR-CLIP [2]
hsa-miR-548i RCC2
PAR-CLIP [2]
hsa-miR-548i PLAGL2
PAR-CLIP [2]
hsa-miR-548i HSP90AA1
PAR-CLIP [2]
hsa-miR-548i CCDC80
PAR-CLIP [2]
hsa-miR-548i VDAC2
PAR-CLIP [2]
hsa-miR-548i ZNF724
PAR-CLIP [2]
hsa-miR-548i KHSRP
PAR-CLIP [2]
hsa-miR-548i SMIM15
HITS-CLIP [11] [12] [13]
hsa-miR-548i EBNA1BP2
HITS-CLIP [12]
hsa-miR-548i PRKG2
HITS-CLIP [12]
hsa-miR-548i PLEKHG7
HITS-CLIP [12]
hsa-miR-548i KDM5A
HITS-CLIP [12]
hsa-miR-548i CTCFL
HITS-CLIP [12]
hsa-miR-548i LYRM2
HITS-CLIP [12]
hsa-miR-548i CLDN16
HITS-CLIP [12]
hsa-miR-548i MTHFD1
HITS-CLIP [10]
hsa-miR-548i SLC43A3
HITS-CLIP [8]
hsa-miR-548i MKI67
HITS-CLIP [8]
hsa-miR-548i AQP3
HITS-CLIP [8]
hsa-miR-548i PCGF5
HITS-CLIP [8]
hsa-miR-548i RYBP
HITS-CLIP [14]
hsa-miR-548i ZBTB37
HITS-CLIP [14]
hsa-miR-548i SETD7
HITS-CLIP [14]
hsa-miR-548i SDAD1
HITS-CLIP [14]

References

authors journal year Pubmed link title
1 Memczak et al. Nature 2013 23446348 Circular RNAs are a large class of animal RNAs with regulatory potency.
2 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
3 Lipchina et al. Genes Dev. 2011 22012620 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
4 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
5 Gottwein et al. Cell Host Microbe 2011 22100165 Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines.
6 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
7 Farazi et al. Genome Biol. 2014 24398324 Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets.
8 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
9 Skalsky et al. PLoS Pathog. 2012 22291592 The viral and cellular microRNA targetome in lymphoblastoid cell lines.
10 Kishore et al. Genome Biol. 2013 23706177 Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing.
11 Pillai et al. Breast Cancer Res. Treat. 2014 24906430 HITS-CLIP reveals key regulators of nuclear receptor signaling in breast cancer.
12 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
13 Haecker et al. PLoS Pathog. 2012 22927820 Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas.
14 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
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