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hsa-miR-548e-3p (MIMAT0005874) (153 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-548e-3p DYNC1LI2
PAR-CLIP [1]
hsa-miR-548e-3p PAFAH1B1
PAR-CLIP [2]
hsa-miR-548e-3p ZNF652
HITS-CLIP [3]
hsa-miR-548e-3p JMY
PAR-CLIP [1]
hsa-miR-548e-3p ID4
PAR-CLIP [2] [4]
hsa-miR-548e-3p ENTPD4
PAR-CLIP [4]
hsa-miR-548e-3p MID1IP1
HITS-CLIP [1]
PAR-CLIP [1] [5] [2] [4]
hsa-miR-548e-3p WNK1
PAR-CLIP [6]
hsa-miR-548e-3p KLHL42
PAR-CLIP [2] [4]
hsa-miR-548e-3p MPP5
PAR-CLIP [6]
hsa-miR-548e-3p ESYT1
PAR-CLIP [1]
hsa-miR-548e-3p LRRC58
PAR-CLIP [7]
hsa-miR-548e-3p PURB
PAR-CLIP [1]
hsa-miR-548e-3p LMLN
PAR-CLIP [2]
hsa-miR-548e-3p FJX1
HITS-CLIP [3]
PAR-CLIP [4] [1]
hsa-miR-548e-3p ZFP36L1
PAR-CLIP [1]
hsa-miR-548e-3p TERF2IP
PAR-CLIP [1] [8] [5]
hsa-miR-548e-3p TMEM245
PAR-CLIP [9]
hsa-miR-548e-3p CKS2
HITS-CLIP [10]
hsa-miR-548e-3p HMGN2
PAR-CLIP [9] [7] [4]
hsa-miR-548e-3p MRGBP
PAR-CLIP [2] [4] [1]
hsa-miR-548e-3p CALM1
PAR-CLIP [1]
hsa-miR-548e-3p NDRG1
PAR-CLIP [7]
hsa-miR-548e-3p ZC3HAV1L
PAR-CLIP [7]
hsa-miR-548e-3p ILDR1
PAR-CLIP [7]
hsa-miR-548e-3p INTS8
PAR-CLIP [7]
hsa-miR-548e-3p ISPD
PAR-CLIP [7]
hsa-miR-548e-3p PTCHD1
PAR-CLIP [7] [9]
hsa-miR-548e-3p HMGN4
PAR-CLIP [7]
hsa-miR-548e-3p ST6GAL2
PAR-CLIP [7]
hsa-miR-548e-3p GRAMD1C
PAR-CLIP [7]
hsa-miR-548e-3p EML6
PAR-CLIP [7]
hsa-miR-548e-3p SNX1
PAR-CLIP [7]
hsa-miR-548e-3p STK17A
PAR-CLIP [7]
hsa-miR-548e-3p ABI2
PAR-CLIP [7]
hsa-miR-548e-3p ERP44
PAR-CLIP [7]
hsa-miR-548e-3p ZNF774
PAR-CLIP [7]
hsa-miR-548e-3p FKBP1A
PAR-CLIP [7] [9]
hsa-miR-548e-3p ZNF558
PAR-CLIP [7]
hsa-miR-548e-3p ZNF451
PAR-CLIP [7]
hsa-miR-548e-3p ZNF555
PAR-CLIP [7]
hsa-miR-548e-3p TRMT5
PAR-CLIP [7] [9]
hsa-miR-548e-3p ACTR2
PAR-CLIP [7]
hsa-miR-548e-3p SKIL
HITS-CLIP [3]
PAR-CLIP [8]
hsa-miR-548e-3p POFUT1
PAR-CLIP [8]
hsa-miR-548e-3p KANSL1
PAR-CLIP [4] [1] [8] [5]
hsa-miR-548e-3p FEM1C
PAR-CLIP [8]
hsa-miR-548e-3p DIRAS2
PAR-CLIP [9]
hsa-miR-548e-3p PRLR
PAR-CLIP [9]
hsa-miR-548e-3p ABCB7
PAR-CLIP [9]
hsa-miR-548e-3p ZBTB20
PAR-CLIP [9]
hsa-miR-548e-3p ACVR2B
PAR-CLIP [9]
hsa-miR-548e-3p DDX3X
PAR-CLIP [2] [4] [1] [5]
hsa-miR-548e-3p SLC16A1
PAR-CLIP [2] [4] [6]
hsa-miR-548e-3p ARPP19
PAR-CLIP [2] [4] [1]
hsa-miR-548e-3p SCIN
HITS-CLIP [11]
PAR-CLIP [2]
hsa-miR-548e-3p TRIM13
HITS-CLIP [1]
PAR-CLIP [2] [1]
hsa-miR-548e-3p SBNO1
PAR-CLIP [2] [4] [1]
hsa-miR-548e-3p LARP1
HITS-CLIP [1]
PAR-CLIP [2] [1]
hsa-miR-548e-3p ABHD13
PAR-CLIP [1] [2]
hsa-miR-548e-3p FRK
PAR-CLIP [6]
hsa-miR-548e-3p CD226
HITS-CLIP [1]
PAR-CLIP [6]
hsa-miR-548e-3p FUNDC2
PAR-CLIP [6]
hsa-miR-548e-3p SMARCAD1
PAR-CLIP [6]
hsa-miR-548e-3p ZNF81
PAR-CLIP [6]
hsa-miR-548e-3p TMLHE
PAR-CLIP [6]
hsa-miR-548e-3p TNFRSF10D
PAR-CLIP [6]
hsa-miR-548e-3p LDHD
PAR-CLIP [6]
hsa-miR-548e-3p TBL1XR1
PAR-CLIP [6]
hsa-miR-548e-3p NLN
PAR-CLIP [4] [6]
hsa-miR-548e-3p LEFTY1
PAR-CLIP [6]
hsa-miR-548e-3p DGKE
PAR-CLIP [6]
hsa-miR-548e-3p DDX6
PAR-CLIP [6]
hsa-miR-548e-3p BMP2K
PAR-CLIP [6]
hsa-miR-548e-3p ARNTL
PAR-CLIP [1] [6]
hsa-miR-548e-3p ADSS
PAR-CLIP [6] [4] [1]
hsa-miR-548e-3p DNTTIP2
HITS-CLIP [3]
PAR-CLIP [1]
hsa-miR-548e-3p SPRY1
HITS-CLIP [1]
PAR-CLIP [1]
hsa-miR-548e-3p GPC4
PAR-CLIP [4] [1]
hsa-miR-548e-3p CYB5B
PAR-CLIP [1]
hsa-miR-548e-3p PARP15
PAR-CLIP [1]
hsa-miR-548e-3p HHLA1
PAR-CLIP [1]
hsa-miR-548e-3p SLC16A9
PAR-CLIP [1]
hsa-miR-548e-3p KLRC3
PAR-CLIP [1]
hsa-miR-548e-3p TTLL11
PAR-CLIP [4] [1]
hsa-miR-548e-3p SPC25
PAR-CLIP [1]
hsa-miR-548e-3p HS3ST1
PAR-CLIP [1]
hsa-miR-548e-3p XKR4
PAR-CLIP [1]
hsa-miR-548e-3p VEZF1
PAR-CLIP [1]
hsa-miR-548e-3p RNPS1
PAR-CLIP [4] [1]
hsa-miR-548e-3p CCNT2
PAR-CLIP [1]
hsa-miR-548e-3p MED10
PAR-CLIP [1]
hsa-miR-548e-3p STARD3NL
PAR-CLIP [1]
hsa-miR-548e-3p SLX4
PAR-CLIP [1]
hsa-miR-548e-3p RAB33B
PAR-CLIP [1]
hsa-miR-548e-3p PNRC2
PAR-CLIP [1]
hsa-miR-548e-3p PHF12
PAR-CLIP [1]
hsa-miR-548e-3p GJD3
PAR-CLIP [1]
hsa-miR-548e-3p FAM160B1
PAR-CLIP [1]
hsa-miR-548e-3p CDCA4
PAR-CLIP [4] [1]
hsa-miR-548e-3p RPLP0
PAR-CLIP [4]
hsa-miR-548e-3p RAPH1
PAR-CLIP [4]
hsa-miR-548e-3p DEPDC1B
PAR-CLIP [4]
hsa-miR-548e-3p SOX4
PAR-CLIP [4]
hsa-miR-548e-3p SCML2
PAR-CLIP [4]
hsa-miR-548e-3p IGFBP5
PAR-CLIP [4]
hsa-miR-548e-3p ABT1
PAR-CLIP [4]
hsa-miR-548e-3p ZBTB46
PAR-CLIP [4]
hsa-miR-548e-3p KHSRP
PAR-CLIP [4]
hsa-miR-548e-3p DDX21
PAR-CLIP [4]
hsa-miR-548e-3p RPS16
PAR-CLIP [4]
hsa-miR-548e-3p ZRANB1
HITS-CLIP [12]
hsa-miR-548e-3p NHSL1
HITS-CLIP [3]
hsa-miR-548e-3p RSF1
HITS-CLIP [3]
hsa-miR-548e-3p CLOCK
HITS-CLIP [3]
hsa-miR-548e-3p GRK4
HITS-CLIP [3]
hsa-miR-548e-3p C17orf105
HITS-CLIP [3]
hsa-miR-548e-3p PCK1
HITS-CLIP [3]
hsa-miR-548e-3p TNPO2
HITS-CLIP [3]
hsa-miR-548e-3p IGF2BP1
HITS-CLIP [3]
hsa-miR-548e-3p CRLS1
HITS-CLIP [13] [11] [3]
hsa-miR-548e-3p TTC26
HITS-CLIP [3]
hsa-miR-548e-3p PITPNB
HITS-CLIP [3]
hsa-miR-548e-3p CLUAP1
HITS-CLIP [3]
hsa-miR-548e-3p NCK1
HITS-CLIP [3]
hsa-miR-548e-3p ZNF566
HITS-CLIP [3]
hsa-miR-548e-3p LIPG
HITS-CLIP [3]
hsa-miR-548e-3p ZNF280B
HITS-CLIP [3]
hsa-miR-548e-3p PTAR1
HITS-CLIP [3]
hsa-miR-548e-3p LRRC15
HITS-CLIP [3]
hsa-miR-548e-3p APP
HITS-CLIP [3]
hsa-miR-548e-3p AFAP1
HITS-CLIP [3]
hsa-miR-548e-3p ATP6V1G3
HITS-CLIP [3]
hsa-miR-548e-3p SPATS2L
HITS-CLIP [3]
hsa-miR-548e-3p SHMT1
HITS-CLIP [3]
hsa-miR-548e-3p NT5DC3
HITS-CLIP [3]
hsa-miR-548e-3p SPPL2A
HITS-CLIP [3]
hsa-miR-548e-3p LNPK
HITS-CLIP [3]
hsa-miR-548e-3p PIK3CG
HITS-CLIP [11]
hsa-miR-548e-3p KRT80
HITS-CLIP [11]
hsa-miR-548e-3p KCNK6
HITS-CLIP [11]
hsa-miR-548e-3p CERK
HITS-CLIP [11]
hsa-miR-548e-3p UBL3
HITS-CLIP [11]
hsa-miR-548e-3p RAP2B
HITS-CLIP [11]
hsa-miR-548e-3p INSIG1
HITS-CLIP [11]
hsa-miR-548e-3p AVL9
HITS-CLIP [11]
hsa-miR-548e-3p ATP2A2
HITS-CLIP [11]
hsa-miR-548e-3p MRPS10
HITS-CLIP [1]
hsa-miR-548e-3p MLLT1
HITS-CLIP [10]
hsa-miR-548e-3p SUCO
HITS-CLIP [10]
hsa-miR-548e-3p SKA2
HITS-CLIP [10]
hsa-miR-548e-3p KCNS2
HITS-CLIP [10]
hsa-miR-548e-3p PECR
HITS-CLIP [10]

References

authors journal year Pubmed link title
1 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
2 Memczak et al. Nature 2013 23446348 Circular RNAs are a large class of animal RNAs with regulatory potency.
3 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
4 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
5 Farazi et al. Genome Biol. 2014 24398324 Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets.
6 Lipchina et al. Genes Dev. 2011 22012620 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
7 Gottwein et al. Cell Host Microbe 2011 22100165 Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines.
8 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
9 Skalsky et al. PLoS Pathog. 2012 22291592 The viral and cellular microRNA targetome in lymphoblastoid cell lines.
10 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
11 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
12 Pillai et al. Breast Cancer Res. Treat. 2014 24906430 HITS-CLIP reveals key regulators of nuclear receptor signaling in breast cancer.
13 Haecker et al. PLoS Pathog. 2012 22927820 Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas.
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