Targets miRBase

hsa-miR-556-3p (MIMAT0004793) (49 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-556-3p ARSK
PAR-CLIP [1]
hsa-miR-556-3p MIDN
PAR-CLIP [2]
hsa-miR-556-3p CDK1
HITS-CLIP [3]
hsa-miR-556-3p ZIC5
PAR-CLIP [1]
hsa-miR-556-3p DSG2
PAR-CLIP [1]
hsa-miR-556-3p USP6NL
PAR-CLIP [4]
hsa-miR-556-3p ZNF562
PAR-CLIP [2]
hsa-miR-556-3p S100A11
HITS-CLIP [5]
PAR-CLIP [4]
hsa-miR-556-3p DCAF15
HITS-CLIP [3]
PAR-CLIP [4]
hsa-miR-556-3p C5orf51
PAR-CLIP [4]
hsa-miR-556-3p BZW1
PAR-CLIP [4]
hsa-miR-556-3p G3BP2
PAR-CLIP [4]
hsa-miR-556-3p BRWD3
PAR-CLIP [4]
hsa-miR-556-3p CCNE2
PAR-CLIP [6] [1]
hsa-miR-556-3p RPS23
PAR-CLIP [6] [7]
hsa-miR-556-3p ANKRD62
PAR-CLIP [6]
hsa-miR-556-3p NR2C2
PAR-CLIP [6] [7] [1]
hsa-miR-556-3p GOLIM4
PAR-CLIP [8]
hsa-miR-556-3p ALAD
PAR-CLIP [8]
hsa-miR-556-3p MYCN
PAR-CLIP [8]
hsa-miR-556-3p KCNJ8
PAR-CLIP [8]
hsa-miR-556-3p ETNK1
PAR-CLIP [8]
hsa-miR-556-3p SRSF11
PAR-CLIP [7] [1]
hsa-miR-556-3p KRBOX4
PAR-CLIP [1]
hsa-miR-556-3p TWF1
PAR-CLIP [7] [1]
hsa-miR-556-3p MRPL35
PAR-CLIP [1]
hsa-miR-556-3p UBXN2A
PAR-CLIP [1]
hsa-miR-556-3p AOC3
PAR-CLIP [7]
hsa-miR-556-3p SETD5
PAR-CLIP [7]
hsa-miR-556-3p PHAX
PAR-CLIP [7]
hsa-miR-556-3p LBR
PAR-CLIP [7]
hsa-miR-556-3p PNRC2
PAR-CLIP [7]
hsa-miR-556-3p DCAF7
PAR-CLIP [7]
hsa-miR-556-3p CDKN2AIPNL
HITS-CLIP [9]
hsa-miR-556-3p PRRC2A
HITS-CLIP [9]
hsa-miR-556-3p ARID3A
HITS-CLIP [9]
hsa-miR-556-3p TM4SF5
HITS-CLIP [9]
hsa-miR-556-3p SALL3
HITS-CLIP [9]
hsa-miR-556-3p TMX2
HITS-CLIP [9]
hsa-miR-556-3p BRS3
HITS-CLIP [9]
hsa-miR-556-3p COPS8
HITS-CLIP [9]
hsa-miR-556-3p NUAK1
HITS-CLIP [9]
hsa-miR-556-3p KLHL14
HITS-CLIP [9]
hsa-miR-556-3p KLF13
HITS-CLIP [9]
hsa-miR-556-3p KIAA1456
HITS-CLIP [9]
hsa-miR-556-3p TRIM13
HITS-CLIP [9]
hsa-miR-556-3p SPTY2D1
HITS-CLIP [3]
hsa-miR-556-3p RNF187
HITS-CLIP [10]
hsa-miR-556-3p SAMD4A
HITS-CLIP [10]

References

authors journal year Pubmed link title
1 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
2 Gottwein et al. Cell Host Microbe 2011 22100165 Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines.
3 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
4 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
5 Kishore et al. Genome Biol. 2013 23706177 Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing.
6 Memczak et al. Nature 2013 23446348 Circular RNAs are a large class of animal RNAs with regulatory potency.
7 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
8 Lipchina et al. Genes Dev. 2011 22012620 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
9 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
10 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.