| miRNA | gene name | experiments | ||||||
|---|---|---|---|---|---|---|---|---|
| hsa-miR-223-5p | PCGF3 |
|
||||||
| hsa-miR-223-5p | HSPA1A |
|
||||||
| hsa-miR-223-5p | CHIC1 |
|
||||||
| hsa-miR-223-5p | PACRGL |
|
||||||
| hsa-miR-223-5p | HACE1 |
|
||||||
| hsa-miR-223-5p | FOXC1 |
|
||||||
| hsa-miR-223-5p | ID4 |
|
||||||
| hsa-miR-223-5p | ESCO2 |
|
||||||
| hsa-miR-223-5p | KLHL15 |
|
||||||
| hsa-miR-223-5p | RTL8C |
|
||||||
| hsa-miR-223-5p | COL19A1 |
|
||||||
| hsa-miR-223-5p | LMOD3 |
|
||||||
| hsa-miR-223-5p | NT5C1B |
|
||||||
| hsa-miR-223-5p | NT5C1B-RDH14 |
|
||||||
| hsa-miR-223-5p | ZNF449 |
|
||||||
| hsa-miR-223-5p | UGCG |
|
||||||
| hsa-miR-223-5p | SLITRK4 |
|
||||||
| hsa-miR-223-5p | MBD6 |
|
||||||
| hsa-miR-223-5p | INSIG2 |
|
||||||
| hsa-miR-223-5p | CCND1 |
|
||||||
| hsa-miR-223-5p | AKT3 |
|
||||||
| hsa-miR-223-5p | AGO2 |
|
||||||
| hsa-miR-223-5p | MGRN1 |
|
||||||
| hsa-miR-223-5p | RTL8A |
|
||||||
| hsa-miR-223-5p | BRWD3 |
|
||||||
| hsa-miR-223-5p | SOX5 |
|
||||||
| hsa-miR-223-5p | NCAM2 |
|
||||||
| hsa-miR-223-5p | CEP104 |
|
||||||
| hsa-miR-223-5p | LHFPL5 |
|
||||||
| hsa-miR-223-5p | PHF7 |
|
||||||
| hsa-miR-223-5p | EHD3 |
|
||||||
| hsa-miR-223-5p | UGT2B4 |
|
||||||
| hsa-miR-223-5p | CYGB |
|
||||||
| hsa-miR-223-5p | PLEKHA6 |
|
||||||
| hsa-miR-223-5p | DOCK7 |
|
||||||
| hsa-miR-223-5p | SENP1 |
|
||||||
| hsa-miR-223-5p | SEC23IP |
|
||||||
| hsa-miR-223-5p | PLEKHA3 |
|
||||||
| hsa-miR-223-5p | MSANTD4 |
|
||||||
| hsa-miR-223-5p | KCNJ3 |
|
||||||
| hsa-miR-223-5p | E2F8 |
|
||||||
| hsa-miR-223-5p | CREBRF |
|
||||||
| hsa-miR-223-5p | CD226 |
|
||||||
| hsa-miR-223-5p | XRCC3 |
|
||||||
| hsa-miR-223-5p | ASB11 |
|
||||||
| hsa-miR-223-5p | BTBD19 |
|
||||||
| hsa-miR-223-5p | TECRL |
|
||||||
| hsa-miR-223-5p | MLLT3 |
|
||||||
| hsa-miR-223-5p | PALM2-AKAP2 |
|
||||||
| hsa-miR-223-5p | AKAP2 |
|
||||||
| hsa-miR-223-5p | TSC22D3 |
|
||||||
| hsa-miR-223-5p | TSPAN2 |
|
||||||
| hsa-miR-223-5p | BRCC3 |
|
||||||
| hsa-miR-223-5p | PDE10A |
|
||||||
| hsa-miR-223-5p | OTX1 |
|
||||||
| hsa-miR-223-5p | TRIM2 |
|
||||||
| hsa-miR-223-5p | EFCAB11 |
|
||||||
| hsa-miR-223-5p | BVES |
|
||||||
| hsa-miR-223-5p | F2RL1 |
|
||||||
| hsa-miR-223-5p | USP25 |
|
||||||
| hsa-miR-223-5p | ITGA1 |
|
||||||
| hsa-miR-223-5p | KANSL1L |
|
||||||
| hsa-miR-223-5p | GTF2H1 |
|
||||||
| hsa-miR-223-5p | NAA25 |
|
||||||
| hsa-miR-223-5p | STARD8 |
|
||||||
| hsa-miR-223-5p | CYP4F11 |
|
||||||
| hsa-miR-223-5p | ATP5S |
|
||||||
| hsa-miR-223-5p | SV2B |
|
||||||
| hsa-miR-223-5p | PURA |
|
||||||
| hsa-miR-223-5p | PMAIP1 |
|
||||||
| hsa-miR-223-5p | NRF1 |
|
||||||
| hsa-miR-223-5p | KLHL23 |
|
||||||
| hsa-miR-223-5p | IL6ST |
|
||||||
| hsa-miR-223-5p | HNRNPA0 |
|
||||||
| hsa-miR-223-5p | HMGB2 |
|
||||||
| hsa-miR-223-5p | DUSP7 |
|
||||||
| hsa-miR-223-5p | CSRNP3 |
|
||||||
| hsa-miR-223-5p | CFL2 |
|
||||||
| hsa-miR-223-5p | EPOR |
|
||||||
| hsa-miR-223-5p | CABP4 |
|
||||||
| hsa-miR-223-5p | SLC35E3 |
|
||||||
| hsa-miR-223-5p | WDR72 |
|
||||||
| hsa-miR-223-5p | ABHD18 |
|
||||||
| hsa-miR-223-5p | NLGN4X |
|
||||||
| hsa-miR-223-5p | PLXDC2 |
|
||||||
| hsa-miR-223-5p | DBT |
|
||||||
| hsa-miR-223-5p | GLRX2 |
|
||||||
| hsa-miR-223-5p | SLC35F6 |
|
||||||
| hsa-miR-223-5p | ANG |
|
||||||
| hsa-miR-223-5p | KCNK12 |
|
||||||
| hsa-miR-223-5p | VENTX |
|
||||||
| hsa-miR-223-5p | NT5DC1 |
|
||||||
| hsa-miR-223-5p | CHAF1B |
|
||||||
| hsa-miR-223-5p | SLC2A12 |
|
||||||
| hsa-miR-223-5p | PCDH10 |
|
||||||
| hsa-miR-223-5p | STN1 |
|
||||||
| hsa-miR-223-5p | RBM22 |
|
||||||
| hsa-miR-223-5p | UBN2 |
|
||||||
| hsa-miR-223-5p | TMEM106B |
|
||||||
| hsa-miR-223-5p | THSD7A |
|
||||||
| hsa-miR-223-5p | RUNX1T1 |
|
||||||
| hsa-miR-223-5p | RTN4RL1 |
|
||||||
| hsa-miR-223-5p | RBBP9 |
|
||||||
| hsa-miR-223-5p | PLAG1 |
|
||||||
| hsa-miR-223-5p | PAPSS2 |
|
||||||
| hsa-miR-223-5p | NELL2 |
|
||||||
| hsa-miR-223-5p | MON1B |
|
||||||
| hsa-miR-223-5p | MAP7D1 |
|
||||||
| hsa-miR-223-5p | LDLR |
|
||||||
| hsa-miR-223-5p | NEXMIF |
|
||||||
| hsa-miR-223-5p | HHIP |
|
||||||
| hsa-miR-223-5p | GRIN2B |
|
||||||
| hsa-miR-223-5p | ETV6 |
|
||||||
| hsa-miR-223-5p | EPHA5 |
|
||||||
| hsa-miR-223-5p | DENND4C |
|
||||||
| hsa-miR-223-5p | DCUN1D3 |
|
||||||
| hsa-miR-223-5p | CNTNAP5 |
|
||||||
| hsa-miR-223-5p | CALML4 |
|
||||||
| hsa-miR-223-5p | ENTHD1 |
|
||||||
| hsa-miR-223-5p | BRI3BP |
|
||||||
| hsa-miR-223-5p | AMD1 |
|
||||||
| hsa-miR-223-5p | ABHD13 |
|
||||||
| hsa-miR-223-5p | GPR173 |
|
||||||
| hsa-miR-223-5p | TRIM13 |
|
||||||
| hsa-miR-223-5p | SLC7A11 |
|
||||||
| hsa-miR-223-5p | PFN1 |
|
||||||
| hsa-miR-223-5p | GALNT3 |
|
||||||
| hsa-miR-223-5p | ERMP1 |
|
||||||
| hsa-miR-223-5p | BMPR1A |
|
||||||
| hsa-miR-223-5p | SSPN |
|
||||||
| hsa-miR-223-5p | USF3 |
|
||||||
| hsa-miR-223-5p | IRS1 |
|
||||||
| hsa-miR-223-5p | TAOK1 |
|
||||||
| hsa-miR-223-5p | PLEKHM3 |
|
||||||
| hsa-miR-223-5p | AIMP1 |
|
||||||
| hsa-miR-223-5p | EDA2R |
|
||||||
| hsa-miR-223-5p | MKLN1 |
|
||||||
| hsa-miR-223-5p | PLP1 |
|
||||||
| hsa-miR-223-5p | NDFIP2 |
|
||||||
| hsa-miR-223-5p | TMTC3 |
|
||||||
| hsa-miR-223-5p | OSBPL9 |
|
||||||
| hsa-miR-223-5p | LHFPL2 |
|
||||||
| hsa-miR-223-5p | FNIP1 |
|
||||||
| hsa-miR-223-5p | CRIM1 |
|
||||||
| hsa-miR-223-5p | ATP2A2 |
|
||||||
| hsa-miR-223-5p | ACBD5 |
|
||||||
| hsa-miR-223-5p | ABI2 |
|
||||||
| hsa-miR-223-5p | RGS4 |
|
||||||
| hsa-miR-223-5p | APOL6 |
|
||||||
| hsa-miR-223-5p | SMAD9 |
|
||||||
| hsa-miR-223-5p | MYLK3 |
|
||||||
| hsa-miR-223-5p | CYP4V2 |
|
||||||
| hsa-miR-223-5p | AR |
|
||||||
| hsa-miR-223-5p | FAM26E |
|
||||||
| hsa-miR-223-5p | CTSE |
|
||||||
| hsa-miR-223-5p | POT1 |
|
||||||
| hsa-miR-223-5p | ATP7A |
|
||||||
| hsa-miR-223-5p | LRRC31 |
|
||||||
| hsa-miR-223-5p | GIMAP7 |
|
||||||
| hsa-miR-223-5p | ADH1B |
|
||||||
| hsa-miR-223-5p | MMADHC |
|
||||||
| hsa-miR-223-5p | TMEM133 |
|
||||||
| hsa-miR-223-5p | TRIM42 |
|
||||||
| hsa-miR-223-5p | LDHAL6A |
|
||||||
| hsa-miR-223-5p | TMEM47 |
|
||||||
| hsa-miR-223-5p | EPHA1 |
|
||||||
| hsa-miR-223-5p | IGLON5 |
|
||||||
| hsa-miR-223-5p | ALG1 |
|
||||||
| hsa-miR-223-5p | ZNF562 |
|
||||||
| hsa-miR-223-5p | ZHX3 |
|
||||||
| hsa-miR-223-5p | VAMP4 |
|
||||||
| hsa-miR-223-5p | TRAF5 |
|
||||||
| hsa-miR-223-5p | RRAGC |
|
||||||
| hsa-miR-223-5p | PROX1 |
|
||||||
| hsa-miR-223-5p | PPP1CC |
|
||||||
| hsa-miR-223-5p | PLCB1 |
|
||||||
| hsa-miR-223-5p | PCDH11Y |
|
||||||
| hsa-miR-223-5p | MXD1 |
|
||||||
| hsa-miR-223-5p | MBNL2 |
|
||||||
| hsa-miR-223-5p | LIFR |
|
||||||
| hsa-miR-223-5p | KLF6 |
|
||||||
| hsa-miR-223-5p | IGF1R |
|
||||||
| hsa-miR-223-5p | GXYLT2 |
|
||||||
| hsa-miR-223-5p | GPBP1L1 |
|
||||||
| hsa-miR-223-5p | FREM2 |
|
||||||
| hsa-miR-223-5p | FOXP1 |
|
||||||
| hsa-miR-223-5p | FAM177A1 |
|
||||||
| hsa-miR-223-5p | ENTPD5 |
|
||||||
| hsa-miR-223-5p | DGKH |
|
||||||
| hsa-miR-223-5p | CHORDC1 |
|
||||||
| hsa-miR-223-5p | CCSER2 |
|
||||||
| hsa-miR-223-5p | CBX1 |
|
||||||
| hsa-miR-223-5p | ASH1L |
|
||||||
| hsa-miR-223-5p | AMER1 |
|
||||||
| hsa-miR-223-5p | ZNF268 |
|
||||||
| hsa-miR-223-5p | H3F3B |
|
||||||
| hsa-miR-223-5p | ZNF655 |
|
||||||
| hsa-miR-223-5p | KATNAL1 |
|
||||||
| hsa-miR-223-5p | SIGMAR1 |
|
||||||
| hsa-miR-223-5p | DMD |
|
||||||
| hsa-miR-223-5p | FLVCR1 |
|
||||||
| hsa-miR-223-5p | PLA2G16 |
|
||||||
| hsa-miR-223-5p | RGS5 |
|
||||||
| hsa-miR-223-5p | SHH |
|
||||||
| hsa-miR-223-5p | BTN3A3 |
|
||||||
| hsa-miR-223-5p | ZFHX2 |
|
||||||
| hsa-miR-223-5p | FHL2 |
|
||||||
| hsa-miR-223-5p | ZNF134 |
|
||||||
| hsa-miR-223-5p | RNF152 |
|
||||||
| hsa-miR-223-5p | G6PC |
|
||||||
| hsa-miR-223-5p | ARRB1 |
|
||||||
| hsa-miR-223-5p | GLRA2 |
|
||||||
| hsa-miR-223-5p | SPRY4 |
|
||||||
| hsa-miR-223-5p | NECAB1 |
|
||||||
| hsa-miR-223-5p | SATB1 |
|
||||||
| hsa-miR-223-5p | BNC2 |
|
||||||
| hsa-miR-223-5p | FGF14 |
|
||||||
| hsa-miR-223-5p | SPATA6 |
|
||||||
| hsa-miR-223-5p | ZNF860 |
|
||||||
| hsa-miR-223-5p | C12orf60 |
|
||||||
| hsa-miR-223-5p | CDH6 |
|
||||||
| hsa-miR-223-5p | LPP |
|
||||||
| hsa-miR-223-5p | WDR3 |
|
||||||
| hsa-miR-223-5p | SEPT7 |
|
||||||
| hsa-miR-223-5p | LYRM7 |
|
||||||
| hsa-miR-223-5p | CCDC137 |
|
||||||
| hsa-miR-223-5p | RAB11FIP3 |
|
||||||
| hsa-miR-223-5p | C15orf41 |
|
||||||
| hsa-miR-223-5p | TNFAIP8 |
|
||||||
| hsa-miR-223-5p | KCNQ5 |
|
||||||
| hsa-miR-223-5p | IFFO2 |
|
||||||
| hsa-miR-223-5p | MX2 |
|
||||||
| hsa-miR-223-5p | PPID |
|
||||||
| hsa-miR-223-5p | RNF115 |
|
||||||
| hsa-miR-223-5p | HEPHL1 |
|
||||||
| hsa-miR-223-5p | ZKSCAN4 |
|
||||||
| hsa-miR-223-5p | IGF1 |
|
||||||
| hsa-miR-223-5p | DYM |
|
||||||
| hsa-miR-223-5p | ADAT2 |
|
||||||
| hsa-miR-223-5p | SNX2 |
|
||||||
| hsa-miR-223-5p | SFT2D3 |
|
||||||
| hsa-miR-223-5p | PEAK1 |
|
||||||
| hsa-miR-223-5p | USP5 |
|
||||||
| hsa-miR-223-5p | NFIC |
|
||||||
| hsa-miR-223-5p | ETV3 |
|
||||||
| hsa-miR-223-5p | ZNF529 |
|
||||||
| hsa-miR-223-5p | ZNF850 |
|
||||||
| hsa-miR-223-5p | RARS2 |
|
||||||
| hsa-miR-223-5p | PPP1R16B |
|
||||||
| hsa-miR-223-5p | ADAMTS9 |
|
||||||
| hsa-miR-223-5p | LATS2 |
|
||||||
| hsa-miR-223-5p | KIAA1671 |
|
||||||
| hsa-miR-223-5p | ADD2 |
|
||||||
| hsa-miR-223-5p | PARD6G |
|
||||||
| hsa-miR-223-5p | DMXL1 |
|
| authors | journal | year | Pubmed link | title | |
|---|---|---|---|---|---|
| 1 | Hafner et al. | Cell | 2010 | 20371350 | Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP. |
| 2 | Whisnant et al. | MBio | 2013 | 23592263 | In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms. |
| 3 | Memczak et al. | Nature | 2013 | 23446348 | Circular RNAs are a large class of animal RNAs with regulatory potency. |
| 4 | Lipchina et al. | Genes Dev. | 2011 | 22012620 | Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response. |
| 5 | Kishore et al. | Nat. Methods | 2011 | 21572407 | A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins. |
| 6 | Xue et al. | Cell | 2013 | 23313552 | Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits. |
| 7 | Gottwein et al. | Cell Host Microbe | 2011 | 22100165 | Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines. |
| 8 | Karginov et al. | Genes Dev. | 2013 | 23824327 | Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates. |
| 9 | Kishore et al. | Genome Biol. | 2013 | 23706177 | Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing. |
| 10 | Pillai et al. | Breast Cancer Res. Treat. | 2014 | 24906430 | HITS-CLIP reveals key regulators of nuclear receptor signaling in breast cancer. |
| 11 | Haecker et al. | PLoS Pathog. | 2012 | 22927820 | Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas. |
| 12 | Chi et al. | Nature | 2009 | 19536157 | Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps. |