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hsa-miR-199b-3p (MIMAT0004563) (69 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-199b-3p SGPL1
PAR-CLIP [1]
hsa-miR-199b-3p UCK2
PAR-CLIP [1]
hsa-miR-199b-3p MAP3K4
PAR-CLIP [1]
hsa-miR-199b-3p PNRC1
PAR-CLIP [1]
hsa-miR-199b-3p KMT2A
PAR-CLIP [2]
hsa-miR-199b-3p DDIT4
PAR-CLIP [3]
hsa-miR-199b-3p ETNK1
PAR-CLIP [4]
hsa-miR-199b-3p C11orf57
PAR-CLIP [1]
hsa-miR-199b-3p CNEP1R1
HITS-CLIP [5]
hsa-miR-199b-3p QKI
PAR-CLIP [3]
hsa-miR-199b-3p CCDC59
PAR-CLIP [6]
hsa-miR-199b-3p SOD2
PAR-CLIP [6]
hsa-miR-199b-3p ARL15
PAR-CLIP [6]
hsa-miR-199b-3p COL4A5
PAR-CLIP [6]
hsa-miR-199b-3p MTRF1L
PAR-CLIP [1]
hsa-miR-199b-3p COX10
PAR-CLIP [1]
hsa-miR-199b-3p ZXDB
PAR-CLIP [1]
hsa-miR-199b-3p TMED5
PAR-CLIP [1]
hsa-miR-199b-3p RGMB
PAR-CLIP [1]
hsa-miR-199b-3p PKM
PAR-CLIP [1]
hsa-miR-199b-3p PAQR5
HITS-CLIP [7] [8] [9] [10] [5]
PAR-CLIP [11] [12] [3] [7] [1]
hsa-miR-199b-3p NACC1
PAR-CLIP [3] [1]
hsa-miR-199b-3p MCOLN2
PAR-CLIP [1] [12] [3] [7]
hsa-miR-199b-3p LIN54
PAR-CLIP [1] [11]
hsa-miR-199b-3p FOXK2
PAR-CLIP [1]
hsa-miR-199b-3p CSRP2
PAR-CLIP [7] [1]
hsa-miR-199b-3p HLA-B
PAR-CLIP [1]
hsa-miR-199b-3p WNK2
PAR-CLIP [1]
hsa-miR-199b-3p TAB2
PAR-CLIP [1]
hsa-miR-199b-3p GNAS
PAR-CLIP [1]
hsa-miR-199b-3p UNC5C
PAR-CLIP [2]
hsa-miR-199b-3p ID2
PAR-CLIP [2]
hsa-miR-199b-3p RGS17
PAR-CLIP [2]
hsa-miR-199b-3p GGA3
PAR-CLIP [11]
hsa-miR-199b-3p CREBZF
HITS-CLIP [7]
PAR-CLIP [12] [3] [7]
hsa-miR-199b-3p TMEM18
PAR-CLIP [4]
hsa-miR-199b-3p HSD17B12
PAR-CLIP [4]
hsa-miR-199b-3p TAF1D
PAR-CLIP [4]
hsa-miR-199b-3p GFPT2
PAR-CLIP [4] [7]
hsa-miR-199b-3p RBM43
PAR-CLIP [7]
hsa-miR-199b-3p FICD
PAR-CLIP [7]
hsa-miR-199b-3p ZNF585B
PAR-CLIP [7]
hsa-miR-199b-3p TOR1AIP2
PAR-CLIP [7]
hsa-miR-199b-3p GOLIM4
PAR-CLIP [7]
hsa-miR-199b-3p CDK17
PAR-CLIP [7]
hsa-miR-199b-3p VPS33A
PAR-CLIP [7]
hsa-miR-199b-3p TSPAN3
PAR-CLIP [7]
hsa-miR-199b-3p TMEM161B
PAR-CLIP [7]
hsa-miR-199b-3p STC2
PAR-CLIP [3] [7]
hsa-miR-199b-3p FGF2
HITS-CLIP [7]
PAR-CLIP [7]
hsa-miR-199b-3p CSNK1A1
PAR-CLIP [7]
hsa-miR-199b-3p CEP55
PAR-CLIP [7]
hsa-miR-199b-3p BLOC1S6
PAR-CLIP [7]
hsa-miR-199b-3p EFHD2
PAR-CLIP [3]
hsa-miR-199b-3p ATF7IP
PAR-CLIP [3]
hsa-miR-199b-3p UBE2V1
PAR-CLIP [3]
hsa-miR-199b-3p TMEM189-UBE2V1
PAR-CLIP [3]
hsa-miR-199b-3p TMEM189
PAR-CLIP [3]
hsa-miR-199b-3p LUC7L2
HITS-CLIP [13] [14]
hsa-miR-199b-3p C7orf55-LUC7L2
HITS-CLIP [13] [14]
hsa-miR-199b-3p OCIAD2
HITS-CLIP [14]
hsa-miR-199b-3p VTA1
HITS-CLIP [14]
hsa-miR-199b-3p E2F2
HITS-CLIP [14]
hsa-miR-199b-3p LINC00346
HITS-CLIP [14]
hsa-miR-199b-3p ZNF384
HITS-CLIP [14]
hsa-miR-199b-3p CCDC80
HITS-CLIP [5]
hsa-miR-199b-3p SLC30A6
HITS-CLIP [5]
hsa-miR-199b-3p PHF8
HITS-CLIP [13]
hsa-miR-199b-3p FXN
HITS-CLIP [13]

References

authors journal year Pubmed link title
1 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
2 Skalsky et al. PLoS Pathog. 2012 22291592 The viral and cellular microRNA targetome in lymphoblastoid cell lines.
3 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
4 Lipchina et al. Genes Dev. 2011 22012620 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
5 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
6 Gottwein et al. Cell Host Microbe 2011 22100165 Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines.
7 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
8 Kishore et al. Genome Biol. 2013 23706177 Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing.
9 Haecker et al. PLoS Pathog. 2012 22927820 Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas.
10 Pillai et al. Breast Cancer Res. Treat. 2014 24906430 HITS-CLIP reveals key regulators of nuclear receptor signaling in breast cancer.
11 Farazi et al. Genome Biol. 2014 24398324 Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets.
12 Memczak et al. Nature 2013 23446348 Circular RNAs are a large class of animal RNAs with regulatory potency.
13 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
14 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
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