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hsa-miR-196a-3p (MIMAT0004562) (141 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-196a-3p RPS26
CLASH [1]
hsa-miR-196a-3p PI4K2B
PAR-CLIP [2] [3] [4]
hsa-miR-196a-3p HBP1
PAR-CLIP [3] [4]
hsa-miR-196a-3p NUFIP2
PAR-CLIP [5]
hsa-miR-196a-3p CDKN2AIP
PAR-CLIP [3]
hsa-miR-196a-3p ZNF292
HITS-CLIP [6]
hsa-miR-196a-3p EIF5AL1
PAR-CLIP [5]
hsa-miR-196a-3p CAMK4
PAR-CLIP [7] [5] [3]
hsa-miR-196a-3p PITPNA
PAR-CLIP [5]
hsa-miR-196a-3p IKZF3
PAR-CLIP [4] [5]
hsa-miR-196a-3p DDAH1
PAR-CLIP [5]
hsa-miR-196a-3p MXRA8
PAR-CLIP [5]
hsa-miR-196a-3p PCBD2
PAR-CLIP [5]
hsa-miR-196a-3p SRM
PAR-CLIP [4] [2] [3]
hsa-miR-196a-3p XRCC6
PAR-CLIP [2]
hsa-miR-196a-3p UGDH
HITS-CLIP [6]
PAR-CLIP [2] [4]
hsa-miR-196a-3p C1orf35
PAR-CLIP [2]
hsa-miR-196a-3p MLH1
PAR-CLIP [2]
hsa-miR-196a-3p TRIM4
PAR-CLIP [7]
hsa-miR-196a-3p CASP16P
PAR-CLIP [3] [7]
hsa-miR-196a-3p SSH2
PAR-CLIP [4]
hsa-miR-196a-3p ZBTB44
PAR-CLIP [4]
hsa-miR-196a-3p EIF3H
PAR-CLIP [4]
hsa-miR-196a-3p DNAH10OS
PAR-CLIP [4]
hsa-miR-196a-3p CNBP
PAR-CLIP [4]
hsa-miR-196a-3p EMC1
HITS-CLIP [8]
PAR-CLIP [4]
hsa-miR-196a-3p GAPVD1
PAR-CLIP [4]
hsa-miR-196a-3p IRGQ
HITS-CLIP [8] [4]
PAR-CLIP [4]
hsa-miR-196a-3p SLC24A4
HITS-CLIP [8]
PAR-CLIP [4]
hsa-miR-196a-3p CEP104
PAR-CLIP [4]
hsa-miR-196a-3p GTF2B
HITS-CLIP [6]
PAR-CLIP [4]
hsa-miR-196a-3p FAM83F
PAR-CLIP [4]
hsa-miR-196a-3p CXCL10
PAR-CLIP [4]
hsa-miR-196a-3p ERCC1
HITS-CLIP [6]
PAR-CLIP [4]
hsa-miR-196a-3p F2RL2
PAR-CLIP [4]
hsa-miR-196a-3p PON1
PAR-CLIP [4]
hsa-miR-196a-3p C18orf32
HITS-CLIP [6]
PAR-CLIP [4]
hsa-miR-196a-3p PARP2
PAR-CLIP [4]
hsa-miR-196a-3p ZC3HAV1
PAR-CLIP [4]
hsa-miR-196a-3p PEX2
PAR-CLIP [4]
hsa-miR-196a-3p FUT1
HITS-CLIP [9] [6]
PAR-CLIP [4]
hsa-miR-196a-3p GON7
PAR-CLIP [4]
hsa-miR-196a-3p LIMD1
PAR-CLIP [4]
hsa-miR-196a-3p WDR12
PAR-CLIP [4]
hsa-miR-196a-3p AKR7A2
PAR-CLIP [4]
hsa-miR-196a-3p WDR13
PAR-CLIP [4]
hsa-miR-196a-3p MRPS10
PAR-CLIP [4]
hsa-miR-196a-3p RPS15A
PAR-CLIP [4]
hsa-miR-196a-3p NUP43
PAR-CLIP [4]
hsa-miR-196a-3p ITGA2
PAR-CLIP [4]
hsa-miR-196a-3p ATRAID
PAR-CLIP [3]
hsa-miR-196a-3p ARID1A
PAR-CLIP [3]
hsa-miR-196a-3p SLC29A1
PAR-CLIP [3]
hsa-miR-196a-3p VAV3
HITS-CLIP [6]
PAR-CLIP [3]
hsa-miR-196a-3p MTX3
PAR-CLIP [3]
hsa-miR-196a-3p MTMR3
PAR-CLIP [3]
hsa-miR-196a-3p LINGO1
PAR-CLIP [3]
hsa-miR-196a-3p RAPGEFL1
HITS-CLIP [8] [9] [10]
hsa-miR-196a-3p GMPR
HITS-CLIP [10]
hsa-miR-196a-3p TRAPPC2
HITS-CLIP [8] [9]
hsa-miR-196a-3p ZNF234
HITS-CLIP [9] [8]
hsa-miR-196a-3p MYLK3
HITS-CLIP [8] [9]
hsa-miR-196a-3p CYP1A2
HITS-CLIP [9]
hsa-miR-196a-3p YIPF4
HITS-CLIP [9]
hsa-miR-196a-3p SLC11A1
HITS-CLIP [9]
hsa-miR-196a-3p ZNF556
HITS-CLIP [9]
hsa-miR-196a-3p ZBTB8B
HITS-CLIP [9]
hsa-miR-196a-3p XKR4
HITS-CLIP [9]
hsa-miR-196a-3p VEGFC
HITS-CLIP [9]
hsa-miR-196a-3p ELOVL6
HITS-CLIP [9] [8]
hsa-miR-196a-3p SLC35E2
HITS-CLIP [9]
hsa-miR-196a-3p TFDP2
HITS-CLIP [9]
hsa-miR-196a-3p ZNF286A
HITS-CLIP [9]
hsa-miR-196a-3p GK5
HITS-CLIP [9]
hsa-miR-196a-3p SLC11A2
HITS-CLIP [9]
hsa-miR-196a-3p EPB41
HITS-CLIP [9]
hsa-miR-196a-3p CHAF1B
HITS-CLIP [9]
hsa-miR-196a-3p SC5D
HITS-CLIP [9]
hsa-miR-196a-3p ZNF652
HITS-CLIP [9]
hsa-miR-196a-3p SMARCE1
HITS-CLIP [9]
hsa-miR-196a-3p PRSS21
HITS-CLIP [9]
hsa-miR-196a-3p TRIM16L
HITS-CLIP [9]
hsa-miR-196a-3p TMEM78
HITS-CLIP [9]
hsa-miR-196a-3p GPR75
HITS-CLIP [9]
hsa-miR-196a-3p C1GALT1
HITS-CLIP [9]
hsa-miR-196a-3p APLF
HITS-CLIP [9]
hsa-miR-196a-3p TBC1D15
HITS-CLIP [9]
hsa-miR-196a-3p POFUT2
HITS-CLIP [9]
hsa-miR-196a-3p ZDHHC24
HITS-CLIP [9]
hsa-miR-196a-3p TIGD6
HITS-CLIP [9]
hsa-miR-196a-3p SIGLEC9
HITS-CLIP [9]
hsa-miR-196a-3p ZNF286B
HITS-CLIP [9]
hsa-miR-196a-3p SMAD2
HITS-CLIP [9]
hsa-miR-196a-3p KNSTRN
HITS-CLIP [9]
hsa-miR-196a-3p HAUS3
HITS-CLIP [9]
hsa-miR-196a-3p ABCF3
HITS-CLIP [8] [9]
hsa-miR-196a-3p KLHDC8A
HITS-CLIP [9]
hsa-miR-196a-3p HACE1
HITS-CLIP [9]
hsa-miR-196a-3p KCNE4
HITS-CLIP [6]
hsa-miR-196a-3p DNAJC28
HITS-CLIP [6]
hsa-miR-196a-3p SUSD5
HITS-CLIP [6]
hsa-miR-196a-3p OR7D2
HITS-CLIP [8]
hsa-miR-196a-3p PLXNA3
HITS-CLIP [8]
hsa-miR-196a-3p NR3C1
HITS-CLIP [8]
hsa-miR-196a-3p IRAK1BP1
HITS-CLIP [8]
hsa-miR-196a-3p C17orf105
HITS-CLIP [8]
hsa-miR-196a-3p CENPL
HITS-CLIP [8]
hsa-miR-196a-3p ZNF383
HITS-CLIP [8]
hsa-miR-196a-3p SEC31A
HITS-CLIP [8]
hsa-miR-196a-3p ZNF749
HITS-CLIP [8]
hsa-miR-196a-3p PLAC8
HITS-CLIP [8]
hsa-miR-196a-3p MRPS21
HITS-CLIP [8]
hsa-miR-196a-3p SCUBE3
HITS-CLIP [8]
hsa-miR-196a-3p DOCK7
HITS-CLIP [8]
hsa-miR-196a-3p UBXN2A
HITS-CLIP [8]
hsa-miR-196a-3p STK4
HITS-CLIP [8]
hsa-miR-196a-3p SIX4
HITS-CLIP [8]
hsa-miR-196a-3p ITPRIPL2
HITS-CLIP [8]
hsa-miR-196a-3p FBXL3
HITS-CLIP [8]
hsa-miR-196a-3p RTL8C
HITS-CLIP [8]
hsa-miR-196a-3p DDX19B
HITS-CLIP [8]
hsa-miR-196a-3p ATP1B3
HITS-CLIP [8]
hsa-miR-196a-3p H6PD
HITS-CLIP [4]
hsa-miR-196a-3p PDK3
HITS-CLIP [4]
hsa-miR-196a-3p OLR1
HITS-CLIP [11]
hsa-miR-196a-3p MRPS16
HITS-CLIP [11]
hsa-miR-196a-3p PHF7
HITS-CLIP [11]
hsa-miR-196a-3p SKA1
HITS-CLIP [11]
hsa-miR-196a-3p CENPO
HITS-CLIP [11]
hsa-miR-196a-3p KANSL3
HITS-CLIP [11]
hsa-miR-196a-3p SHE
HITS-CLIP [11]
hsa-miR-196a-3p TERF1
HITS-CLIP [11]
hsa-miR-196a-3p RNF125
HITS-CLIP [11]
hsa-miR-196a-3p TMPRSS11BNL
HITS-CLIP [11]
hsa-miR-196a-3p SNRPD3
HITS-CLIP [11]
hsa-miR-196a-3p ZNF549
HITS-CLIP [11]
hsa-miR-196a-3p TTC39C
HITS-CLIP [11]
hsa-miR-196a-3p CRCP
HITS-CLIP [11]
hsa-miR-196a-3p SH3D19
HITS-CLIP [11]
hsa-miR-196a-3p COA4
HITS-CLIP [11]
hsa-miR-196a-3p CUL4A
HITS-CLIP [11]

References

authors journal year Pubmed link title
1 Helwak et al. Cell 2013 23622248 Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding.
2 Memczak et al. Nature 2013 23446348 Circular RNAs are a large class of animal RNAs with regulatory potency.
3 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
4 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
5 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
6 Kishore et al. Genome Biol. 2013 23706177 Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing.
7 Lipchina et al. Genes Dev. 2011 22012620 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
8 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
9 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
10 Pillai et al. Breast Cancer Res. Treat. 2014 24906430 HITS-CLIP reveals key regulators of nuclear receptor signaling in breast cancer.
11 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
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