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hsa-miR-548d-3p (MIMAT0003323) (275 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-548d-3p ERBB2
Reporter assay [1]
Other [1]
Luciferase reporter assay [1]
hsa-miR-548d-3p BUB3
HITS-CLIP [2]
hsa-miR-548d-3p LEPROT
PAR-CLIP [3]
hsa-miR-548d-3p SUZ12
PAR-CLIP [3] [4]
hsa-miR-548d-3p LLGL2
PAR-CLIP [3]
hsa-miR-548d-3p ID4
PAR-CLIP [5] [6]
hsa-miR-548d-3p CBX3
PAR-CLIP [6]
hsa-miR-548d-3p MPZL1
PAR-CLIP [6]
hsa-miR-548d-3p AKAP11
HITS-CLIP [3]
PAR-CLIP [5] [6] [3] [7] [4] [8]
hsa-miR-548d-3p SKI
PAR-CLIP [6]
hsa-miR-548d-3p NHLRC3
HITS-CLIP [3]
PAR-CLIP [6] [3] [5]
hsa-miR-548d-3p LDLR
HITS-CLIP [9]
hsa-miR-548d-3p TNPO1
HITS-CLIP [10]
hsa-miR-548d-3p SOX4
HITS-CLIP [3]
PAR-CLIP [5] [6] [3] [7] [4]
hsa-miR-548d-3p STRN3
PAR-CLIP [6] [3]
hsa-miR-548d-3p RMND5A
PAR-CLIP [6]
hsa-miR-548d-3p CDK5R1
PAR-CLIP [6] [3]
hsa-miR-548d-3p ARF1
PAR-CLIP [6] [3]
hsa-miR-548d-3p IGF1R
PAR-CLIP [5] [3] [4] [8]
hsa-miR-548d-3p ZNF845
HITS-CLIP [9]
hsa-miR-548d-3p C4orf3
HITS-CLIP [10]
hsa-miR-548d-3p SYNCRIP
PAR-CLIP [3]
hsa-miR-548d-3p LUC7L2
HITS-CLIP [10]
hsa-miR-548d-3p TM9SF3
PAR-CLIP [4]
hsa-miR-548d-3p TOMM20
PAR-CLIP [6] [3] [7]
hsa-miR-548d-3p ALYREF
HITS-CLIP [10]
hsa-miR-548d-3p LSM14A
HITS-CLIP [10]
hsa-miR-548d-3p MRGBP
PAR-CLIP [5] [6] [3]
hsa-miR-548d-3p RBPJ
PAR-CLIP [6]
hsa-miR-548d-3p GRPEL2
PAR-CLIP [6]
hsa-miR-548d-3p M6PR
PAR-CLIP [6] [3] [4]
hsa-miR-548d-3p TMEM158
PAR-CLIP [11]
hsa-miR-548d-3p HMX3
PAR-CLIP [11]
hsa-miR-548d-3p FRMD5
PAR-CLIP [11]
hsa-miR-548d-3p PTPRG
PAR-CLIP [11]
hsa-miR-548d-3p HSBP1
PAR-CLIP [11]
hsa-miR-548d-3p EXD2
PAR-CLIP [11]
hsa-miR-548d-3p TNFSF15
PAR-CLIP [11]
hsa-miR-548d-3p CD1D
PAR-CLIP [11]
hsa-miR-548d-3p RABIF
PAR-CLIP [11]
hsa-miR-548d-3p ACSL3
PAR-CLIP [11]
hsa-miR-548d-3p ABHD2
PAR-CLIP [11]
hsa-miR-548d-3p C3orf30
PAR-CLIP [11]
hsa-miR-548d-3p TMCC3
PAR-CLIP [11]
hsa-miR-548d-3p P2RY10
PAR-CLIP [11]
hsa-miR-548d-3p ADAMTS5
PAR-CLIP [11]
hsa-miR-548d-3p PALM2
PAR-CLIP [11]
hsa-miR-548d-3p IMP3
PAR-CLIP [11]
hsa-miR-548d-3p GABRB3
PAR-CLIP [11]
hsa-miR-548d-3p ZNF101
PAR-CLIP [4]
hsa-miR-548d-3p GRK2
PAR-CLIP [4]
hsa-miR-548d-3p NUDT19
PAR-CLIP [4]
hsa-miR-548d-3p UGCG
PAR-CLIP [4]
hsa-miR-548d-3p TSC22D2
PAR-CLIP [4] [8]
hsa-miR-548d-3p SKIL
PAR-CLIP [4]
hsa-miR-548d-3p SDC4
PAR-CLIP [4]
hsa-miR-548d-3p RHOB
PAR-CLIP [4]
hsa-miR-548d-3p POLR2D
PAR-CLIP [3] [4]
hsa-miR-548d-3p POGK
PAR-CLIP [4]
hsa-miR-548d-3p PDIA6
PAR-CLIP [4]
hsa-miR-548d-3p PDE4D
PAR-CLIP [3] [4]
hsa-miR-548d-3p NR2F2
PAR-CLIP [3] [4]
hsa-miR-548d-3p NEK7
PAR-CLIP [4]
hsa-miR-548d-3p KANSL1
PAR-CLIP [6] [3] [4] [8]
hsa-miR-548d-3p CDKN1B
PAR-CLIP [5] [6] [3] [7] [4]
hsa-miR-548d-3p C11orf57
PAR-CLIP [4]
hsa-miR-548d-3p AR
PAR-CLIP [4]
hsa-miR-548d-3p ACTB
PAR-CLIP [3] [4]
hsa-miR-548d-3p ABCE1
PAR-CLIP [4]
hsa-miR-548d-3p INHBA
HITS-CLIP [3]
PAR-CLIP [8] [5] [6] [3] [7] [4]
hsa-miR-548d-3p ANKEF1
HITS-CLIP [9] [3] [12]
PAR-CLIP [5] [6] [3] [7] [4] [8]
hsa-miR-548d-3p YWHAZ
PAR-CLIP [4]
hsa-miR-548d-3p ARNTL
PAR-CLIP [4]
hsa-miR-548d-3p SF1
PAR-CLIP [13]
hsa-miR-548d-3p HSPA1B
PAR-CLIP [5] [6] [3] [8]
hsa-miR-548d-3p CELSR3
PAR-CLIP [6] [3] [8]
hsa-miR-548d-3p CDC37L1
HITS-CLIP [3]
PAR-CLIP [3] [8] [5] [6]
hsa-miR-548d-3p FBXL13
PAR-CLIP [5] [7]
hsa-miR-548d-3p MYO6
PAR-CLIP [5]
hsa-miR-548d-3p MC2R
PAR-CLIP [5]
hsa-miR-548d-3p PURA
PAR-CLIP [5]
hsa-miR-548d-3p BCAT1
PAR-CLIP [5] [6]
hsa-miR-548d-3p YES1
PAR-CLIP [5] [6]
hsa-miR-548d-3p HMGN2
PAR-CLIP [5]
hsa-miR-548d-3p AMER1
PAR-CLIP [5] [6] [7]
hsa-miR-548d-3p XRCC3
PAR-CLIP [5] [3]
hsa-miR-548d-3p MYBPC1
PAR-CLIP [5]
hsa-miR-548d-3p SSU72
PAR-CLIP [5]
hsa-miR-548d-3p UBE2D1
PAR-CLIP [6] [5]
hsa-miR-548d-3p PSMA2
PAR-CLIP [5] [6]
hsa-miR-548d-3p PPP3R1
PAR-CLIP [5] [6]
hsa-miR-548d-3p MBNL3
PAR-CLIP [5] [6]
hsa-miR-548d-3p LRRC55
HITS-CLIP [12] [3]
PAR-CLIP [5] [6] [3]
hsa-miR-548d-3p SYNM
PAR-CLIP [7]
hsa-miR-548d-3p PPIA
HITS-CLIP [10]
PAR-CLIP [7]
hsa-miR-548d-3p CLASP1
PAR-CLIP [7]
hsa-miR-548d-3p FBLN2
PAR-CLIP [7]
hsa-miR-548d-3p MGARP
PAR-CLIP [7]
hsa-miR-548d-3p SMU1
HITS-CLIP [12] [3]
PAR-CLIP [3] [7]
hsa-miR-548d-3p COL4A3
PAR-CLIP [7]
hsa-miR-548d-3p TBC1D22B
PAR-CLIP [7]
hsa-miR-548d-3p ZNF100
PAR-CLIP [7]
hsa-miR-548d-3p ATRNL1
PAR-CLIP [7]
hsa-miR-548d-3p PDE5A
PAR-CLIP [7]
hsa-miR-548d-3p SEL1L
PAR-CLIP [7]
hsa-miR-548d-3p MKRN3
PAR-CLIP [7]
hsa-miR-548d-3p TMEM18
PAR-CLIP [7]
hsa-miR-548d-3p WDR13
PAR-CLIP [7]
hsa-miR-548d-3p VKORC1L1
PAR-CLIP [7]
hsa-miR-548d-3p RNF20
PAR-CLIP [7]
hsa-miR-548d-3p RAB33B
PAR-CLIP [7]
hsa-miR-548d-3p FAM169A
PAR-CLIP [7]
hsa-miR-548d-3p CABLES1
PAR-CLIP [7]
hsa-miR-548d-3p ARL10
PAR-CLIP [7]
hsa-miR-548d-3p NWD1
PAR-CLIP [3]
hsa-miR-548d-3p PITPNC1
PAR-CLIP [3]
hsa-miR-548d-3p SLC25A43
PAR-CLIP [3]
hsa-miR-548d-3p CDC27
PAR-CLIP [3]
hsa-miR-548d-3p ZNF829
PAR-CLIP [3]
hsa-miR-548d-3p MFAP3
PAR-CLIP [3]
hsa-miR-548d-3p YY2
PAR-CLIP [3]
hsa-miR-548d-3p SNCB
PAR-CLIP [3]
hsa-miR-548d-3p SPC25
PAR-CLIP [3]
hsa-miR-548d-3p VEZF1
PAR-CLIP [3]
hsa-miR-548d-3p DCUN1D3
PAR-CLIP [3]
hsa-miR-548d-3p DAZAP1
PAR-CLIP [6] [3]
hsa-miR-548d-3p ZNF681
PAR-CLIP [3]
hsa-miR-548d-3p SLC29A1
PAR-CLIP [6] [3]
hsa-miR-548d-3p SPPL3
PAR-CLIP [3]
hsa-miR-548d-3p HDGFL2
PAR-CLIP [3]
hsa-miR-548d-3p ALG1
HITS-CLIP [9]
PAR-CLIP [3]
hsa-miR-548d-3p YAF2
PAR-CLIP [3]
hsa-miR-548d-3p TVP23C
PAR-CLIP [3]
hsa-miR-548d-3p TSPAN3
PAR-CLIP [3]
hsa-miR-548d-3p NPM3
HITS-CLIP [3]
PAR-CLIP [3]
hsa-miR-548d-3p RECK
PAR-CLIP [3]
hsa-miR-548d-3p MTF2
PAR-CLIP [3] [6]
hsa-miR-548d-3p ITGA2
PAR-CLIP [3]
hsa-miR-548d-3p CNIH1
PAR-CLIP [3]
hsa-miR-548d-3p C20orf24
PAR-CLIP [3]
hsa-miR-548d-3p C18orf25
PAR-CLIP [3]
hsa-miR-548d-3p GSKIP
PAR-CLIP [6]
hsa-miR-548d-3p GAL3ST3
PAR-CLIP [6]
hsa-miR-548d-3p GRB2
PAR-CLIP [6]
hsa-miR-548d-3p EIF2S2
PAR-CLIP [6]
hsa-miR-548d-3p ARID1A
HITS-CLIP [10]
PAR-CLIP [6]
hsa-miR-548d-3p ZNF678
PAR-CLIP [6]
hsa-miR-548d-3p DEPDC1B
PAR-CLIP [6]
hsa-miR-548d-3p TRA2B
HITS-CLIP [10]
PAR-CLIP [6]
hsa-miR-548d-3p TMEM64
PAR-CLIP [6]
hsa-miR-548d-3p RFX1
PAR-CLIP [6]
hsa-miR-548d-3p MTMR3
PAR-CLIP [6]
hsa-miR-548d-3p CELF2
PAR-CLIP [6]
hsa-miR-548d-3p ATF7IP
PAR-CLIP [6]
hsa-miR-548d-3p MYBL1
PAR-CLIP [6]
hsa-miR-548d-3p THYN1
PAR-CLIP [6]
hsa-miR-548d-3p PHF19
PAR-CLIP [6]
hsa-miR-548d-3p HOXA9
PAR-CLIP [6]
hsa-miR-548d-3p CELF1
PAR-CLIP [6]
hsa-miR-548d-3p ACOT9
PAR-CLIP [6]
hsa-miR-548d-3p KHSRP
PAR-CLIP [6]
hsa-miR-548d-3p VPS50
HITS-CLIP [2] [10]
PAR-CLIP [6]
hsa-miR-548d-3p CMTM6
PAR-CLIP [6]
hsa-miR-548d-3p PSAT1
PAR-CLIP [6]
hsa-miR-548d-3p NRBF2
PAR-CLIP [6]
hsa-miR-548d-3p NKTR
HITS-CLIP [9] [10] [14]
hsa-miR-548d-3p ATP9A
HITS-CLIP [9] [10] [14]
hsa-miR-548d-3p TMEM189
HITS-CLIP [10]
hsa-miR-548d-3p TCEAL4
HITS-CLIP [10]
hsa-miR-548d-3p FAM49A
HITS-CLIP [10]
hsa-miR-548d-3p SYT2
HITS-CLIP [10] [2]
hsa-miR-548d-3p NAV2
HITS-CLIP [10]
hsa-miR-548d-3p SGO2
HITS-CLIP [10]
hsa-miR-548d-3p TMEM189-UBE2V1
HITS-CLIP [10]
hsa-miR-548d-3p KCNK10
HITS-CLIP [10]
hsa-miR-548d-3p SLC2A4
HITS-CLIP [10]
hsa-miR-548d-3p HIPK3
HITS-CLIP [10]
hsa-miR-548d-3p EDIL3
HITS-CLIP [10]
hsa-miR-548d-3p RPL3L
HITS-CLIP [10]
hsa-miR-548d-3p TRPC3
HITS-CLIP [10]
hsa-miR-548d-3p PCNX2
HITS-CLIP [2] [9] [10]
hsa-miR-548d-3p TRIB2
HITS-CLIP [10]
hsa-miR-548d-3p INO80C
HITS-CLIP [10]
hsa-miR-548d-3p AMPD3
HITS-CLIP [10]
hsa-miR-548d-3p MMS22L
HITS-CLIP [10]
hsa-miR-548d-3p BRD4
HITS-CLIP [10]
hsa-miR-548d-3p PTPN11
HITS-CLIP [10]
hsa-miR-548d-3p GDPGP1
HITS-CLIP [10]
hsa-miR-548d-3p ESR1
HITS-CLIP [10]
hsa-miR-548d-3p CD59
HITS-CLIP [10]
hsa-miR-548d-3p RAPH1
HITS-CLIP [10]
hsa-miR-548d-3p CFAP65
HITS-CLIP [10]
hsa-miR-548d-3p CCR5
HITS-CLIP [10]
hsa-miR-548d-3p TXNL1
HITS-CLIP [10]
hsa-miR-548d-3p UBE2V1
HITS-CLIP [10]
hsa-miR-548d-3p SLC25A51
HITS-CLIP [10]
hsa-miR-548d-3p SALL1
HITS-CLIP [10]
hsa-miR-548d-3p RRAGC
HITS-CLIP [10]
hsa-miR-548d-3p RC3H1
HITS-CLIP [10]
hsa-miR-548d-3p NRXN1
HITS-CLIP [10]
hsa-miR-548d-3p MAX
HITS-CLIP [10]
hsa-miR-548d-3p HNRNPA1
HITS-CLIP [10]
hsa-miR-548d-3p FMNL3
HITS-CLIP [10]
hsa-miR-548d-3p FAM208A
HITS-CLIP [10]
hsa-miR-548d-3p C7orf55-LUC7L2
HITS-CLIP [10]
hsa-miR-548d-3p ARID4A
HITS-CLIP [10]
hsa-miR-548d-3p ANGPTL2
HITS-CLIP [10]
hsa-miR-548d-3p MARCH2
HITS-CLIP [10]
hsa-miR-548d-3p RNF2
HITS-CLIP [10]
hsa-miR-548d-3p USF3
HITS-CLIP [10]
hsa-miR-548d-3p AP3B1
HITS-CLIP [10]
hsa-miR-548d-3p ZNF652
HITS-CLIP [10]
hsa-miR-548d-3p SFT2D2
HITS-CLIP [10]
hsa-miR-548d-3p RAP2B
HITS-CLIP [2] [10]
hsa-miR-548d-3p PTEN
HITS-CLIP [10]
hsa-miR-548d-3p PRR3
HITS-CLIP [10]
hsa-miR-548d-3p UNC93A
HITS-CLIP [10]
hsa-miR-548d-3p NOP53
HITS-CLIP [10]
hsa-miR-548d-3p SERBP1
HITS-CLIP [10]
hsa-miR-548d-3p PNRC1
HITS-CLIP [10]
hsa-miR-548d-3p TCF24
HITS-CLIP [10]
hsa-miR-548d-3p PCMTD2
HITS-CLIP [10]
hsa-miR-548d-3p GIN1
HITS-CLIP [10]
hsa-miR-548d-3p VDR
HITS-CLIP [10]
hsa-miR-548d-3p STEAP4
HITS-CLIP [10]
hsa-miR-548d-3p B3GALNT1
HITS-CLIP [10]
hsa-miR-548d-3p TNFRSF13C
HITS-CLIP [10]
hsa-miR-548d-3p ZCCHC9
HITS-CLIP [10]
hsa-miR-548d-3p UFM1
HITS-CLIP [10]
hsa-miR-548d-3p CLNK
HITS-CLIP [10]
hsa-miR-548d-3p ZNF518B
HITS-CLIP [10] [2]
hsa-miR-548d-3p SLC30A1
HITS-CLIP [10]
hsa-miR-548d-3p SIX4
HITS-CLIP [10]
hsa-miR-548d-3p LCOR
HITS-CLIP [10]
hsa-miR-548d-3p KIAA1456
HITS-CLIP [10]
hsa-miR-548d-3p KDM5A
HITS-CLIP [10]
hsa-miR-548d-3p TOR1AIP2
HITS-CLIP [9] [10]
hsa-miR-548d-3p GPC5
HITS-CLIP [10]
hsa-miR-548d-3p BTBD3
HITS-CLIP [10]
hsa-miR-548d-3p C9orf64
HITS-CLIP [10]
hsa-miR-548d-3p TGIF2
HITS-CLIP [10]
hsa-miR-548d-3p GINS2
HITS-CLIP [10]
hsa-miR-548d-3p ERCC1
HITS-CLIP [10]
hsa-miR-548d-3p AAGAB
HITS-CLIP [10]
hsa-miR-548d-3p TRIM45
HITS-CLIP [9]
hsa-miR-548d-3p TMPPE
HITS-CLIP [9]
hsa-miR-548d-3p NHLRC2
HITS-CLIP [9]
hsa-miR-548d-3p KCNJ15
HITS-CLIP [9]
hsa-miR-548d-3p HHIP
HITS-CLIP [9]
hsa-miR-548d-3p SCIMP
HITS-CLIP [9]
hsa-miR-548d-3p NUDT7
HITS-CLIP [9]
hsa-miR-548d-3p RSRC1
HITS-CLIP [9]
hsa-miR-548d-3p XRN2
HITS-CLIP [9]
hsa-miR-548d-3p KIAA1324
HITS-CLIP [9]
hsa-miR-548d-3p ZFHX3
HITS-CLIP [9]
hsa-miR-548d-3p TJP1
HITS-CLIP [9]
hsa-miR-548d-3p SOAT1
HITS-CLIP [9]
hsa-miR-548d-3p SEMA4D
HITS-CLIP [9]
hsa-miR-548d-3p NEO1
HITS-CLIP [9]
hsa-miR-548d-3p MRO
HITS-CLIP [9]
hsa-miR-548d-3p MAP3K1
HITS-CLIP [9]
hsa-miR-548d-3p FAM126B
HITS-CLIP [9]
hsa-miR-548d-3p PGM3
HITS-CLIP [3]
hsa-miR-548d-3p LAMTOR1
HITS-CLIP [2]
hsa-miR-548d-3p RHOA
HITS-CLIP [2]
hsa-miR-548d-3p CCBE1
HITS-CLIP [2]
hsa-miR-548d-3p U2SURP
HITS-CLIP [2]
hsa-miR-548d-3p PKIA
HITS-CLIP [2]
hsa-miR-548d-3p TADA3
HITS-CLIP [2]
hsa-miR-548d-3p NEGR1
HITS-CLIP [2]
hsa-miR-548d-3p G2E3
HITS-CLIP [2]
hsa-miR-548d-3p MYOCD
HITS-CLIP [2]
hsa-miR-548d-3p ZNF460
HITS-CLIP [2]
hsa-miR-548d-3p GTF2F2
HITS-CLIP [2]
hsa-miR-548d-3p TMLHE
HITS-CLIP [2]

References

authors journal year Pubmed link title
1 Chen et al. Biochem. Biophys. Res. Commun. 2009 19486885 Preliminary validation of ERBB2 expression regulated by miR-548d-3p and miR-559.
2 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
3 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
4 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
5 Memczak et al. Nature 2013 23446348 Circular RNAs are a large class of animal RNAs with regulatory potency.
6 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
7 Lipchina et al. Genes Dev. 2011 22012620 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
8 Farazi et al. Genome Biol. 2014 24398324 Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets.
9 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
10 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
11 Gottwein et al. Cell Host Microbe 2011 22100165 Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines.
12 Kishore et al. Genome Biol. 2013 23706177 Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing.
13 Skalsky et al. PLoS Pathog. 2012 22291592 The viral and cellular microRNA targetome in lymphoblastoid cell lines.
14 Pillai et al. Breast Cancer Res. Treat. 2014 24906430 HITS-CLIP reveals key regulators of nuclear receptor signaling in breast cancer.
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