| miRNA | gene name | experiments | ||||||
|---|---|---|---|---|---|---|---|---|
| hsa-miR-629-3p | DDX3X |
|
||||||
| hsa-miR-629-3p | ATP5B |
|
||||||
| hsa-miR-629-3p | BCL2L2-PABPN1 |
|
||||||
| hsa-miR-629-3p | PABPN1 |
|
||||||
| hsa-miR-629-3p | DYNLL2 |
|
||||||
| hsa-miR-629-3p | HNRNPUL1 |
|
||||||
| hsa-miR-629-3p | SLC1A1 |
|
||||||
| hsa-miR-629-3p | MBNL1 |
|
||||||
| hsa-miR-629-3p | BNC2 |
|
||||||
| hsa-miR-629-3p | STC2 |
|
||||||
| hsa-miR-629-3p | STMN1 |
|
||||||
| hsa-miR-629-3p | RABL2A |
|
||||||
| hsa-miR-629-3p | RABL2B |
|
||||||
| hsa-miR-629-3p | MRPS27 |
|
||||||
| hsa-miR-629-3p | ZNF148 |
|
||||||
| hsa-miR-629-3p | FAM217B |
|
||||||
| hsa-miR-629-3p | CMKLR1 |
|
||||||
| hsa-miR-629-3p | RAB11B |
|
||||||
| hsa-miR-629-3p | RTL8C |
|
||||||
| hsa-miR-629-3p | RPAP2 |
|
||||||
| hsa-miR-629-3p | TMEM233 |
|
||||||
| hsa-miR-629-3p | SLC46A1 |
|
||||||
| hsa-miR-629-3p | ZNF83 |
|
||||||
| hsa-miR-629-3p | ZNF669 |
|
||||||
| hsa-miR-629-3p | ZNF791 |
|
||||||
| hsa-miR-629-3p | ZNF781 |
|
||||||
| hsa-miR-629-3p | ZNF487 |
|
||||||
| hsa-miR-629-3p | EBAG9 |
|
||||||
| hsa-miR-629-3p | ZNF138 |
|
||||||
| hsa-miR-629-3p | ACSL6 |
|
||||||
| hsa-miR-629-3p | ZNF440 |
|
||||||
| hsa-miR-629-3p | EREG |
|
||||||
| hsa-miR-629-3p | DCTN6 |
|
||||||
| hsa-miR-629-3p | ZNF732 |
|
||||||
| hsa-miR-629-3p | FKBP14 |
|
||||||
| hsa-miR-629-3p | ZNF772 |
|
||||||
| hsa-miR-629-3p | C18orf32 |
|
||||||
| hsa-miR-629-3p | GPATCH2L |
|
||||||
| hsa-miR-629-3p | ANKRD65 |
|
||||||
| hsa-miR-629-3p | CCDC43 |
|
||||||
| hsa-miR-629-3p | ACOT9 |
|
||||||
| hsa-miR-629-3p | LRRC38 |
|
||||||
| hsa-miR-629-3p | NEURL1 |
|
||||||
| hsa-miR-629-3p | AGK |
|
||||||
| hsa-miR-629-3p | CMTM6 |
|
||||||
| hsa-miR-629-3p | SKIDA1 |
|
||||||
| hsa-miR-629-3p | SGTB |
|
||||||
| hsa-miR-629-3p | DSE |
|
||||||
| hsa-miR-629-3p | C3orf52 |
|
||||||
| hsa-miR-629-3p | ZNF266 |
|
||||||
| hsa-miR-629-3p | KRBOX4 |
|
||||||
| hsa-miR-629-3p | PM20D2 |
|
||||||
| hsa-miR-629-3p | FRAT2 |
|
||||||
| hsa-miR-629-3p | ZNF202 |
|
||||||
| hsa-miR-629-3p | GABARAPL1 |
|
||||||
| hsa-miR-629-3p | CCDC58 |
|
||||||
| hsa-miR-629-3p | ZNF468 |
|
||||||
| hsa-miR-629-3p | ZNF675 |
|
||||||
| hsa-miR-629-3p | ZNF254 |
|
||||||
| hsa-miR-629-3p | RPS26 |
|
||||||
| hsa-miR-629-3p | ZNF107 |
|
||||||
| hsa-miR-629-3p | ZNF431 |
|
||||||
| hsa-miR-629-3p | TNRC6C |
|
||||||
| hsa-miR-629-3p | PTMA |
|
||||||
| hsa-miR-629-3p | BACH1 |
|
||||||
| hsa-miR-629-3p | ZNF525 |
|
||||||
| hsa-miR-629-3p | ZFP1 |
|
||||||
| hsa-miR-629-3p | ZNF625 |
|
||||||
| hsa-miR-629-3p | ZNF584 |
|
||||||
| hsa-miR-629-3p | RUNDC3B |
|
||||||
| hsa-miR-629-3p | APLN |
|
||||||
| hsa-miR-629-3p | SERPING1 |
|
||||||
| hsa-miR-629-3p | POU2F1 |
|
||||||
| hsa-miR-629-3p | MYOCD |
|
||||||
| hsa-miR-629-3p | PAOX |
|
||||||
| hsa-miR-629-3p | URM1 |
|
||||||
| hsa-miR-629-3p | EMX2 |
|
||||||
| hsa-miR-629-3p | COL4A3BP |
|
||||||
| hsa-miR-629-3p | MYO1F |
|
||||||
| hsa-miR-629-3p | ZSCAN22 |
|
||||||
| hsa-miR-629-3p | GUCA1B |
|
||||||
| hsa-miR-629-3p | CLNK |
|
||||||
| hsa-miR-629-3p | ZNF638 |
|
||||||
| hsa-miR-629-3p | ZNF500 |
|
||||||
| hsa-miR-629-3p | UHRF1BP1L |
|
||||||
| hsa-miR-629-3p | TMEM87B |
|
||||||
| hsa-miR-629-3p | KCNQ3 |
|
||||||
| hsa-miR-629-3p | DR1 |
|
||||||
| hsa-miR-629-3p | LINC00598 |
|
||||||
| hsa-miR-629-3p | ANTXR2 |
|
||||||
| hsa-miR-629-3p | SLC25A44 |
|
||||||
| hsa-miR-629-3p | TMEM50A |
|
||||||
| hsa-miR-629-3p | OTUB2 |
|
||||||
| hsa-miR-629-3p | TFAP2A |
|
||||||
| hsa-miR-629-3p | NEURL1B |
|
||||||
| hsa-miR-629-3p | PTPRB |
|
||||||
| hsa-miR-629-3p | PSTPIP1 |
|
||||||
| hsa-miR-629-3p | CBS |
|
||||||
| hsa-miR-629-3p | GPR158 |
|
||||||
| hsa-miR-629-3p | TBC1D13 |
|
||||||
| hsa-miR-629-3p | COA4 |
|
||||||
| hsa-miR-629-3p | AADACL3 |
|
||||||
| hsa-miR-629-3p | ZNF22 |
|
||||||
| hsa-miR-629-3p | LEMD2 |
|
||||||
| hsa-miR-629-3p | TESMIN |
|
||||||
| hsa-miR-629-3p | ZNF426 |
|
||||||
| hsa-miR-629-3p | CD68 |
|
||||||
| hsa-miR-629-3p | SEMA4G |
|
||||||
| hsa-miR-629-3p | ZNF48 |
|
||||||
| hsa-miR-629-3p | ZNF398 |
|
||||||
| hsa-miR-629-3p | WASF2 |
|
||||||
| hsa-miR-629-3p | TNPO3 |
|
||||||
| hsa-miR-629-3p | TET3 |
|
||||||
| hsa-miR-629-3p | SP9 |
|
||||||
| hsa-miR-629-3p | SLIT1 |
|
||||||
| hsa-miR-629-3p | SLC25A32 |
|
||||||
| hsa-miR-629-3p | RABIF |
|
||||||
| hsa-miR-629-3p | PPP3R1 |
|
||||||
| hsa-miR-629-3p | PHF20L1 |
|
||||||
| hsa-miR-629-3p | PALM2-AKAP2 |
|
||||||
| hsa-miR-629-3p | PADI2 |
|
||||||
| hsa-miR-629-3p | MEX3A |
|
||||||
| hsa-miR-629-3p | MCU |
|
||||||
| hsa-miR-629-3p | LSAMP |
|
||||||
| hsa-miR-629-3p | KIF26B |
|
||||||
| hsa-miR-629-3p | KDM5B |
|
||||||
| hsa-miR-629-3p | IGF1R |
|
||||||
| hsa-miR-629-3p | GJD3 |
|
||||||
| hsa-miR-629-3p | ABRAXAS2 |
|
||||||
| hsa-miR-629-3p | FAM102B |
|
||||||
| hsa-miR-629-3p | ENAH |
|
||||||
| hsa-miR-629-3p | TIGAR |
|
||||||
| hsa-miR-629-3p | ATXN1L |
|
||||||
| hsa-miR-629-3p | ANKRD52 |
|
||||||
| hsa-miR-629-3p | AKAP2 |
|
||||||
| hsa-miR-629-3p | ABHD2 |
|
||||||
| hsa-miR-629-3p | ABHD10 |
|
||||||
| hsa-miR-629-3p | IPO11 |
|
||||||
| hsa-miR-629-3p | IL2RA |
|
||||||
| hsa-miR-629-3p | TECPR2 |
|
||||||
| hsa-miR-629-3p | RNF128 |
|
||||||
| hsa-miR-629-3p | NLRP12 |
|
||||||
| hsa-miR-629-3p | PITPNM3 |
|
||||||
| hsa-miR-629-3p | FZD2 |
|
||||||
| hsa-miR-629-3p | BSND |
|
||||||
| hsa-miR-629-3p | SSBP2 |
|
||||||
| hsa-miR-629-3p | NCKAP1 |
|
||||||
| hsa-miR-629-3p | EPDR1 |
|
||||||
| hsa-miR-629-3p | SPATA2 |
|
||||||
| hsa-miR-629-3p | PERP |
|
||||||
| hsa-miR-629-3p | KIAA1958 |
|
||||||
| hsa-miR-629-3p | EPB41L1 |
|
||||||
| hsa-miR-629-3p | ATP1B3 |
|
||||||
| hsa-miR-629-3p | CDH8 |
|
||||||
| hsa-miR-629-3p | LYRM7 |
|
||||||
| hsa-miR-629-3p | SLC12A3 |
|
||||||
| hsa-miR-629-3p | KRTAP19-1 |
|
||||||
| hsa-miR-629-3p | TRUB2 |
|
||||||
| hsa-miR-629-3p | FAM229B |
|
||||||
| hsa-miR-629-3p | CYYR1 |
|
||||||
| hsa-miR-629-3p | FAM20B |
|
||||||
| hsa-miR-629-3p | ASPA |
|
||||||
| hsa-miR-629-3p | RCC2 |
|
||||||
| hsa-miR-629-3p | MGAT5 |
|
||||||
| hsa-miR-629-3p | WNK2 |
|
||||||
| hsa-miR-629-3p | TMEM44 |
|
||||||
| hsa-miR-629-3p | PAFAH2 |
|
||||||
| hsa-miR-629-3p | MED8 |
|
||||||
| hsa-miR-629-3p | BCL2L13 |
|
||||||
| hsa-miR-629-3p | CES2 |
|
||||||
| hsa-miR-629-3p | TSPAN11 |
|
||||||
| hsa-miR-629-3p | MAPK14 |
|
||||||
| hsa-miR-629-3p | RGS6 |
|
||||||
| hsa-miR-629-3p | NEGR1 |
|
||||||
| hsa-miR-629-3p | GNG2 |
|
||||||
| hsa-miR-629-3p | HARS |
|
||||||
| hsa-miR-629-3p | RBM41 |
|
||||||
| hsa-miR-629-3p | ZCCHC24 |
|
||||||
| hsa-miR-629-3p | PXMP4 |
|
||||||
| hsa-miR-629-3p | CAMK4 |
|
||||||
| hsa-miR-629-3p | FAM9C |
|
||||||
| hsa-miR-629-3p | RAPGEF6 |
|
||||||
| hsa-miR-629-3p | TGFBI |
|
||||||
| hsa-miR-629-3p | IFNAR2 |
|
||||||
| hsa-miR-629-3p | BTN3A2 |
|
||||||
| hsa-miR-629-3p | SDK2 |
|
||||||
| hsa-miR-629-3p | ZDHHC22 |
|
||||||
| hsa-miR-629-3p | AIFM2 |
|
||||||
| hsa-miR-629-3p | MUC17 |
|
||||||
| hsa-miR-629-3p | GANAB |
|
| authors | journal | year | Pubmed link | title | |
|---|---|---|---|---|---|
| 1 | Helwak et al. | Cell | 2013 | 23622248 | Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding. |
| 2 | Whisnant et al. | MBio | 2013 | 23592263 | In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms. |
| 3 | Karginov et al. | Genes Dev. | 2013 | 23824327 | Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates. |
| 4 | Kishore et al. | Nat. Methods | 2011 | 21572407 | A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins. |
| 5 | Memczak et al. | Nature | 2013 | 23446348 | Circular RNAs are a large class of animal RNAs with regulatory potency. |
| 6 | Lipchina et al. | Genes Dev. | 2011 | 22012620 | Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response. |
| 7 | Hafner et al. | Cell | 2010 | 20371350 | Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP. |
| 8 | Majoros et al. | Nat. Methods | 2013 | 23708386 | MicroRNA target site identification by integrating sequence and binding information. |
| 9 | Skalsky et al. | PLoS Pathog. | 2012 | 22291592 | The viral and cellular microRNA targetome in lymphoblastoid cell lines. |
| 10 | Farazi et al. | Genome Biol. | 2014 | 24398324 | Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets. |
| 11 | Xue et al. | Cell | 2013 | 23313552 | Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits. |
| 12 | Chi et al. | Nature | 2009 | 19536157 | Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps. |