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hsa-miR-550a-3p (MIMAT0003257) (40 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-550a-3p DNAJA3
CLASH [1]
hsa-miR-550a-3p TXLNG
CLASH [1]
hsa-miR-550a-3p ZC3H12C
PAR-CLIP [2]
hsa-miR-550a-3p TMEM50B
PAR-CLIP [3]
hsa-miR-550a-3p C2orf72
PAR-CLIP [4] [5] [6] [3]
hsa-miR-550a-3p YWHAE
PAR-CLIP [3]
hsa-miR-550a-3p POLR2F
PAR-CLIP [4] [6]
hsa-miR-550a-3p FEM1B
PAR-CLIP [4]
hsa-miR-550a-3p PKIA
PAR-CLIP [6] [5]
hsa-miR-550a-3p CXCL10
PAR-CLIP [7]
hsa-miR-550a-3p HSP90AA1
PAR-CLIP [7]
hsa-miR-550a-3p POLR3K
PAR-CLIP [7]
hsa-miR-550a-3p YOD1
PAR-CLIP [7]
hsa-miR-550a-3p SYNCRIP
PAR-CLIP [7]
hsa-miR-550a-3p KDELR2
PAR-CLIP [7]
hsa-miR-550a-3p CNIH1
PAR-CLIP [7]
hsa-miR-550a-3p CMIP
PAR-CLIP [7]
hsa-miR-550a-3p MDM2
PAR-CLIP [5]
hsa-miR-550a-3p GTF2E1
PAR-CLIP [5]
hsa-miR-550a-3p ZNF703
PAR-CLIP [5]
hsa-miR-550a-3p ZNF525
PAR-CLIP [5]
hsa-miR-550a-3p HPS4
HITS-CLIP [8] [9] [10]
hsa-miR-550a-3p SLC11A2
HITS-CLIP [10]
hsa-miR-550a-3p YY2
HITS-CLIP [10]
hsa-miR-550a-3p EID2
HITS-CLIP [10]
hsa-miR-550a-3p SC5D
HITS-CLIP [10]
hsa-miR-550a-3p MTAP
HITS-CLIP [10]
hsa-miR-550a-3p ZNF621
HITS-CLIP [10]
hsa-miR-550a-3p ACTR1A
HITS-CLIP [10]
hsa-miR-550a-3p PXMP4
HITS-CLIP [10]
hsa-miR-550a-3p SLC35F6
HITS-CLIP [10]
hsa-miR-550a-3p KCNE4
HITS-CLIP [11]
hsa-miR-550a-3p OR7D2
HITS-CLIP [9]
hsa-miR-550a-3p TM4SF19
HITS-CLIP [8]
hsa-miR-550a-3p EFHB
HITS-CLIP [8]
hsa-miR-550a-3p TRAF1
HITS-CLIP [8]
hsa-miR-550a-3p URM1
HITS-CLIP [8]
hsa-miR-550a-3p TUBD1
HITS-CLIP [8]
hsa-miR-550a-3p RBM8A
HITS-CLIP [8]
hsa-miR-550a-3p ABCF2
HITS-CLIP [8]

References

authors journal year Pubmed link title
1 Helwak et al. Cell 2013 23622248 Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding.
2 Gottwein et al. Cell Host Microbe 2011 22100165 Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines.
3 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
4 Memczak et al. Nature 2013 23446348 Circular RNAs are a large class of animal RNAs with regulatory potency.
5 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
6 Lipchina et al. Genes Dev. 2011 22012620 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
7 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
8 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
9 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
10 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
11 Kishore et al. Genome Biol. 2013 23706177 Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing.
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