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hsa-miR-561-3p (MIMAT0003225) (133 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-561-3p CHAC1
PAR-CLIP [1] [2]
hsa-miR-561-3p SH3GLB1
PAR-CLIP [1] [2]
hsa-miR-561-3p MSH6
PAR-CLIP [1]
hsa-miR-561-3p MSMO1
PAR-CLIP [2]
hsa-miR-561-3p SOX4
HITS-CLIP [2]
PAR-CLIP [3] [1] [2] [4] [5]
hsa-miR-561-3p VLDLR
PAR-CLIP [2]
hsa-miR-561-3p TXNIP
PAR-CLIP [4]
hsa-miR-561-3p FNDC3A
PAR-CLIP [5]
hsa-miR-561-3p TNRC6B
PAR-CLIP [5]
hsa-miR-561-3p FXR1
PAR-CLIP [1]
hsa-miR-561-3p C5orf51
HITS-CLIP [6]
PAR-CLIP [2]
hsa-miR-561-3p CLIC4
PAR-CLIP [1] [2]
hsa-miR-561-3p CEBPB
PAR-CLIP [1]
hsa-miR-561-3p PPP4R2
PAR-CLIP [2]
hsa-miR-561-3p PABPC3
HITS-CLIP [2]
PAR-CLIP [2]
hsa-miR-561-3p C1orf21
PAR-CLIP [1]
hsa-miR-561-3p GTF2E1
PAR-CLIP [2]
hsa-miR-561-3p FOXC1
PAR-CLIP [1]
hsa-miR-561-3p CSTF2
PAR-CLIP [1]
hsa-miR-561-3p CHIC1
PAR-CLIP [3] [1] [2]
hsa-miR-561-3p DHODH
PAR-CLIP [2]
hsa-miR-561-3p RBPJ
PAR-CLIP [1]
hsa-miR-561-3p NR0B1
Luciferase reporter assay [7]
hsa-miR-561-3p FRS2
PAR-CLIP [8]
hsa-miR-561-3p PCDH10
PAR-CLIP [8] [9]
hsa-miR-561-3p PROX2
PAR-CLIP [8]
hsa-miR-561-3p RABIF
PAR-CLIP [8]
hsa-miR-561-3p FUT10
PAR-CLIP [8]
hsa-miR-561-3p CRB1
PAR-CLIP [5]
hsa-miR-561-3p ACADSB
PAR-CLIP [5]
hsa-miR-561-3p NEGR1
PAR-CLIP [5]
hsa-miR-561-3p RAD51AP1
PAR-CLIP [5]
hsa-miR-561-3p STX6
PAR-CLIP [5]
hsa-miR-561-3p PELO
PAR-CLIP [5]
hsa-miR-561-3p LONRF1
PAR-CLIP [5]
hsa-miR-561-3p CNOT6L
PAR-CLIP [3] [1] [2] [5]
hsa-miR-561-3p CDKN1B
PAR-CLIP [2] [4] [5] [1]
hsa-miR-561-3p TMED7
PAR-CLIP [5]
hsa-miR-561-3p PCBP1
PAR-CLIP [3] [1] [5]
hsa-miR-561-3p ZNF99
PAR-CLIP [10]
hsa-miR-561-3p TMTC2
PAR-CLIP [9]
hsa-miR-561-3p TAOK1
PAR-CLIP [9]
hsa-miR-561-3p SYPL1
PAR-CLIP [1] [2] [11] [3]
hsa-miR-561-3p RNFT1
PAR-CLIP [11]
hsa-miR-561-3p CELSR3
PAR-CLIP [1] [2] [11]
hsa-miR-561-3p SLC46A1
PAR-CLIP [3]
hsa-miR-561-3p NUFIP2
PAR-CLIP [3]
hsa-miR-561-3p FAM60A
PAR-CLIP [4] [3] [2]
hsa-miR-561-3p CPEB4
PAR-CLIP [3] [2]
hsa-miR-561-3p SENP3
HITS-CLIP [2] [12]
PAR-CLIP [3] [2] [4]
hsa-miR-561-3p ARPP19
PAR-CLIP [2] [3] [1]
hsa-miR-561-3p LRRC63
PAR-CLIP [3]
hsa-miR-561-3p NT5DC1
HITS-CLIP [13]
PAR-CLIP [3]
hsa-miR-561-3p TMF1
PAR-CLIP [3]
hsa-miR-561-3p GPBP1L1
PAR-CLIP [3] [1] [2]
hsa-miR-561-3p CDCA4
PAR-CLIP [3]
hsa-miR-561-3p SPIC
PAR-CLIP [4]
hsa-miR-561-3p GHSR
PAR-CLIP [4]
hsa-miR-561-3p RFX7
PAR-CLIP [4]
hsa-miR-561-3p PRKAA1
PAR-CLIP [4]
hsa-miR-561-3p PMEPA1
PAR-CLIP [4]
hsa-miR-561-3p INIP
PAR-CLIP [4]
hsa-miR-561-3p ERGIC2
PAR-CLIP [4]
hsa-miR-561-3p ELOVL6
PAR-CLIP [4]
hsa-miR-561-3p DMD
PAR-CLIP [1] [4]
hsa-miR-561-3p C21orf91
PAR-CLIP [4]
hsa-miR-561-3p ANKRD28
PAR-CLIP [4]
hsa-miR-561-3p PABPC1
PAR-CLIP [2]
hsa-miR-561-3p MDM2
PAR-CLIP [1] [2]
hsa-miR-561-3p TRIM66
PAR-CLIP [2]
hsa-miR-561-3p SLC7A5P2
PAR-CLIP [2]
hsa-miR-561-3p ZNF275
PAR-CLIP [2]
hsa-miR-561-3p USP48
PAR-CLIP [1] [2]
hsa-miR-561-3p GFPT1
PAR-CLIP [1] [2]
hsa-miR-561-3p BCLAF1
PAR-CLIP [2] [1]
hsa-miR-561-3p RBM23
PAR-CLIP [1] [2]
hsa-miR-561-3p ZNF138
PAR-CLIP [2]
hsa-miR-561-3p TTC8
PAR-CLIP [2]
hsa-miR-561-3p MRPL35
PAR-CLIP [2]
hsa-miR-561-3p ZNF543
PAR-CLIP [1] [2]
hsa-miR-561-3p TSC22D2
PAR-CLIP [2]
hsa-miR-561-3p SUPT7L
PAR-CLIP [1] [2]
hsa-miR-561-3p ROBO1
PAR-CLIP [2]
hsa-miR-561-3p RCAN2
PAR-CLIP [2]
hsa-miR-561-3p PIP4K2C
PAR-CLIP [2]
hsa-miR-561-3p LMNB2
PAR-CLIP [1] [2]
hsa-miR-561-3p FNBP1L
PAR-CLIP [2]
hsa-miR-561-3p ENC1
PAR-CLIP [2]
hsa-miR-561-3p CHERP
PAR-CLIP [2]
hsa-miR-561-3p TMEM98
PAR-CLIP [1]
hsa-miR-561-3p EIF4A3
PAR-CLIP [1]
hsa-miR-561-3p TWF1
PAR-CLIP [1]
hsa-miR-561-3p TEAD1
PAR-CLIP [1]
hsa-miR-561-3p NUP155
PAR-CLIP [1]
hsa-miR-561-3p LSM12
PAR-CLIP [1]
hsa-miR-561-3p HNRNPF
PAR-CLIP [1]
hsa-miR-561-3p PPWD1
PAR-CLIP [1]
hsa-miR-561-3p SLC35E2
PAR-CLIP [1]
hsa-miR-561-3p ZNF146
PAR-CLIP [1]
hsa-miR-561-3p SON
PAR-CLIP [1]
hsa-miR-561-3p SESN3
PAR-CLIP [1]
hsa-miR-561-3p PTCH1
PAR-CLIP [1]
hsa-miR-561-3p ACVR2A
PAR-CLIP [1]
hsa-miR-561-3p TCHHL1
PAR-CLIP [1]
hsa-miR-561-3p YWHAQ
PAR-CLIP [1]
hsa-miR-561-3p ANP32E
PAR-CLIP [1]
hsa-miR-561-3p RUNDC3B
PAR-CLIP [1]
hsa-miR-561-3p TTC19
PAR-CLIP [1]
hsa-miR-561-3p DDX21
PAR-CLIP [1]
hsa-miR-561-3p LIX1
HITS-CLIP [13]
hsa-miR-561-3p TMTC1
HITS-CLIP [13]
hsa-miR-561-3p PAPOLG
HITS-CLIP [13]
hsa-miR-561-3p BNC2
HITS-CLIP [13]
hsa-miR-561-3p ZNF713
HITS-CLIP [13]
hsa-miR-561-3p TFDP3
HITS-CLIP [13]
hsa-miR-561-3p ISL1
HITS-CLIP [13]
hsa-miR-561-3p USP6NL
HITS-CLIP [13]
hsa-miR-561-3p TAPBP
HITS-CLIP [13]
hsa-miR-561-3p CNN3
HITS-CLIP [13]
hsa-miR-561-3p ARL4C
HITS-CLIP [13]
hsa-miR-561-3p KLHL12
HITS-CLIP [13]
hsa-miR-561-3p GALNT13
HITS-CLIP [13]
hsa-miR-561-3p LPCAT3
HITS-CLIP [13]
hsa-miR-561-3p SLC35B3
HITS-CLIP [13]
hsa-miR-561-3p SCYL3
HITS-CLIP [13]
hsa-miR-561-3p SCO1
HITS-CLIP [13]
hsa-miR-561-3p ERP44
HITS-CLIP [13]
hsa-miR-561-3p C3orf36
HITS-CLIP [6]
hsa-miR-561-3p TOP2A
HITS-CLIP [6]
hsa-miR-561-3p WASL
HITS-CLIP [6]
hsa-miR-561-3p STK38
HITS-CLIP [6]
hsa-miR-561-3p MYO1B
HITS-CLIP [6]
hsa-miR-561-3p PER2
HITS-CLIP [14]

References

authors journal year Pubmed link title
1 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
2 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
3 Memczak et al. Nature 2013 23446348 Circular RNAs are a large class of animal RNAs with regulatory potency.
4 Lipchina et al. Genes Dev. 2011 22012620 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
5 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
6 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
7 Li et al. Drug Metab. Dispos. 2014 24104199 MicroRNA-561 promotes acetaminophen-induced hepatotoxicity in HepG2 cells and primary human hepatocytes through downregulation of the nuclear receptor corepressor dosage-sensitive sex-reversal adrenal hypoplasia congenital critical region on the X chromos
8 Gottwein et al. Cell Host Microbe 2011 22100165 Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines.
9 Skalsky et al. PLoS Pathog. 2012 22291592 The viral and cellular microRNA targetome in lymphoblastoid cell lines.
10 Majoros et al. Nat. Methods 2013 23708386 MicroRNA target site identification by integrating sequence and binding information.
11 Farazi et al. Genome Biol. 2014 24398324 Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets.
12 Haecker et al. PLoS Pathog. 2012 22927820 Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas.
13 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
14 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
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