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hsa-miR-539-5p (MIMAT0003163) (188 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-539-5p TWIST1
qRT-PCR [1]
microarray [1]
Western blot [1]
Luciferase reporter assay [1]
hsa-miR-539-5p ZEB1
qRT-PCR [1]
microarray [1]
Western blot [1]
Luciferase reporter assay [1]
hsa-miR-539-5p LCOR
PAR-CLIP [2] [3] [4] [5]
hsa-miR-539-5p CCT2
PAR-CLIP [3] [4] [6]
hsa-miR-539-5p CALM1
HITS-CLIP [7]
hsa-miR-539-5p BACH1
PAR-CLIP [8]
hsa-miR-539-5p GPBP1
HITS-CLIP [9]
hsa-miR-539-5p SOX4
PAR-CLIP [4]
hsa-miR-539-5p OTUD1
PAR-CLIP [4]
hsa-miR-539-5p WDR1
PAR-CLIP [6]
hsa-miR-539-5p DDX3Y
PAR-CLIP [5]
hsa-miR-539-5p POU2F1
PAR-CLIP [8] [6]
hsa-miR-539-5p MSL1
HITS-CLIP [10] [11]
PAR-CLIP [3] [4]
hsa-miR-539-5p YTHDF3
PAR-CLIP [5] [2]
hsa-miR-539-5p ZNF37A
PAR-CLIP [8]
hsa-miR-539-5p IGF1R
PAR-CLIP [4]
hsa-miR-539-5p PSME3
PAR-CLIP [4]
hsa-miR-539-5p DCK
PAR-CLIP [3] [4]
hsa-miR-539-5p PEBP1
HITS-CLIP [7]
hsa-miR-539-5p PRRG4
HITS-CLIP [12]
hsa-miR-539-5p WASF3
HITS-CLIP [7]
PAR-CLIP [3]
hsa-miR-539-5p TULP3
HITS-CLIP [7]
hsa-miR-539-5p STT3A
HITS-CLIP [7]
hsa-miR-539-5p SLC39A6
HITS-CLIP [7]
hsa-miR-539-5p SFMBT2
HITS-CLIP [7]
hsa-miR-539-5p SF3B1
HITS-CLIP [7]
hsa-miR-539-5p SETX
HITS-CLIP [7]
hsa-miR-539-5p RPS4X
HITS-CLIP [7]
hsa-miR-539-5p NUCB2
HITS-CLIP [7]
hsa-miR-539-5p LOC728392
HITS-CLIP [7]
hsa-miR-539-5p KLHL2
HITS-CLIP [7]
hsa-miR-539-5p KIF21A
HITS-CLIP [7]
hsa-miR-539-5p KAT2B
HITS-CLIP [7]
hsa-miR-539-5p FXR2
HITS-CLIP [7]
hsa-miR-539-5p DNMT3A
HITS-CLIP [7]
hsa-miR-539-5p DNAJB9
HITS-CLIP [7]
hsa-miR-539-5p CNOT4
HITS-CLIP [7]
hsa-miR-539-5p CDC27
HITS-CLIP [7]
hsa-miR-539-5p ARFGEF2
HITS-CLIP [7]
hsa-miR-539-5p ACPP
HITS-CLIP [7]
hsa-miR-539-5p KDM5A
PAR-CLIP [8]
hsa-miR-539-5p CAB39
PAR-CLIP [8]
hsa-miR-539-5p PTPRN2
PAR-CLIP [8]
hsa-miR-539-5p CLIC5
PAR-CLIP [8]
hsa-miR-539-5p TAF1B
PAR-CLIP [8]
hsa-miR-539-5p STS
PAR-CLIP [8]
hsa-miR-539-5p C12orf73
PAR-CLIP [8]
hsa-miR-539-5p UBE2D3
PAR-CLIP [8]
hsa-miR-539-5p TRA2B
PAR-CLIP [8]
hsa-miR-539-5p LAMA2
PAR-CLIP [8]
hsa-miR-539-5p ADAM22
PAR-CLIP [8]
hsa-miR-539-5p SLC16A9
PAR-CLIP [8]
hsa-miR-539-5p IKBIP
PAR-CLIP [8]
hsa-miR-539-5p ACSL6
PAR-CLIP [8]
hsa-miR-539-5p CLIC4
PAR-CLIP [8]
hsa-miR-539-5p IKZF5
PAR-CLIP [8]
hsa-miR-539-5p RPL12
PAR-CLIP [8]
hsa-miR-539-5p C17orf80
PAR-CLIP [8]
hsa-miR-539-5p HNRNPA2B1
PAR-CLIP [8]
hsa-miR-539-5p ZMAT3
PAR-CLIP [8]
hsa-miR-539-5p CDCP1
PAR-CLIP [8]
hsa-miR-539-5p FAM161B
PAR-CLIP [8]
hsa-miR-539-5p RCBTB1
PAR-CLIP [8]
hsa-miR-539-5p CTIF
PAR-CLIP [8]
hsa-miR-539-5p CCDC80
PAR-CLIP [8]
hsa-miR-539-5p TNRC6C
PAR-CLIP [8]
hsa-miR-539-5p ITGA2
PAR-CLIP [8]
hsa-miR-539-5p GLIS3
PAR-CLIP [8]
hsa-miR-539-5p CNDP2
PAR-CLIP [8]
hsa-miR-539-5p XRRA1
PAR-CLIP [8]
hsa-miR-539-5p TRIM5
PAR-CLIP [8]
hsa-miR-539-5p TSPYL1
PAR-CLIP [8]
hsa-miR-539-5p BCL2L13
PAR-CLIP [8]
hsa-miR-539-5p IGF1
PAR-CLIP [8]
hsa-miR-539-5p OR2A4
PAR-CLIP [8]
hsa-miR-539-5p NUFIP2
PAR-CLIP [8] [4] [6]
hsa-miR-539-5p SOD2
PAR-CLIP [3] [5] [6] [13]
hsa-miR-539-5p FKBP5
PAR-CLIP [6]
hsa-miR-539-5p TRAM1
PAR-CLIP [6]
hsa-miR-539-5p DUSP18
PAR-CLIP [6]
hsa-miR-539-5p SLC35F6
PAR-CLIP [6]
hsa-miR-539-5p C5orf22
PAR-CLIP [6]
hsa-miR-539-5p POTED
PAR-CLIP [2] [6] [13] [3] [5]
hsa-miR-539-5p KIAA1191
PAR-CLIP [6]
hsa-miR-539-5p DNALI1
PAR-CLIP [6]
hsa-miR-539-5p UBE2G1
PAR-CLIP [6]
hsa-miR-539-5p TXLNA
PAR-CLIP [6]
hsa-miR-539-5p TSC22D2
PAR-CLIP [6]
hsa-miR-539-5p REST
PAR-CLIP [13] [5] [6]
hsa-miR-539-5p RUBCN
PAR-CLIP [6]
hsa-miR-539-5p MFSD14B
PAR-CLIP [5] [6]
hsa-miR-539-5p GPR137C
PAR-CLIP [3] [5] [6] [13]
hsa-miR-539-5p DNAJC10
PAR-CLIP [13] [3] [5] [6]
hsa-miR-539-5p CTDSPL2
PAR-CLIP [6]
hsa-miR-539-5p CRTAP
PAR-CLIP [6]
hsa-miR-539-5p CHAC1
PAR-CLIP [6]
hsa-miR-539-5p ARL8B
PAR-CLIP [6]
hsa-miR-539-5p IER2
PAR-CLIP [6]
hsa-miR-539-5p LDLR
PAR-CLIP [4] [6] [13]
hsa-miR-539-5p CSTF2
PAR-CLIP [4] [6]
hsa-miR-539-5p PDE4DIP
PAR-CLIP [6]
hsa-miR-539-5p COPA
PAR-CLIP [6]
hsa-miR-539-5p SOX11
PAR-CLIP [4] [2] [6]
hsa-miR-539-5p MTCH1
PAR-CLIP [6]
hsa-miR-539-5p DPY19L1
PAR-CLIP [6]
hsa-miR-539-5p STRN
PAR-CLIP [14]
hsa-miR-539-5p SETD5
PAR-CLIP [14]
hsa-miR-539-5p GPX8
PAR-CLIP [13]
hsa-miR-539-5p PISD
PAR-CLIP [13]
hsa-miR-539-5p NCOA2
PAR-CLIP [13]
hsa-miR-539-5p LAMTOR1
PAR-CLIP [3] [4] [13]
hsa-miR-539-5p HNRNPF
PAR-CLIP [13]
hsa-miR-539-5p GIGYF1
PAR-CLIP [13]
hsa-miR-539-5p CCDC71L
PAR-CLIP [3] [4] [5] [13]
hsa-miR-539-5p TCF7L2
PAR-CLIP [3] [5]
hsa-miR-539-5p SESN3
PAR-CLIP [3]
hsa-miR-539-5p ONECUT2
PAR-CLIP [3]
hsa-miR-539-5p NUPL2
PAR-CLIP [3] [5]
hsa-miR-539-5p PCLAF
PAR-CLIP [3] [4] [5]
hsa-miR-539-5p ZNF121
PAR-CLIP [3] [5]
hsa-miR-539-5p MSANTD4
HITS-CLIP [5]
PAR-CLIP [3] [4] [5]
hsa-miR-539-5p UCP1
PAR-CLIP [3] [4] [5]
hsa-miR-539-5p SLC2A3
PAR-CLIP [3] [5]
hsa-miR-539-5p HNRNPU
PAR-CLIP [4] [5] [3]
hsa-miR-539-5p PHB2
PAR-CLIP [3]
hsa-miR-539-5p SMG1
PAR-CLIP [3] [2]
hsa-miR-539-5p RAB32
PAR-CLIP [3] [2]
hsa-miR-539-5p ZNF579
PAR-CLIP [3] [4]
hsa-miR-539-5p TRAM2
PAR-CLIP [5] [3] [4]
hsa-miR-539-5p PRKD3
PAR-CLIP [3]
hsa-miR-539-5p C4orf32
PAR-CLIP [3]
hsa-miR-539-5p ZMYM1
PAR-CLIP [4] [2]
hsa-miR-539-5p SULT1B1
PAR-CLIP [2]
hsa-miR-539-5p GGA2
PAR-CLIP [2]
hsa-miR-539-5p ELAVL2
PAR-CLIP [2]
hsa-miR-539-5p DPYSL2
PAR-CLIP [2]
hsa-miR-539-5p AHSA2
PAR-CLIP [2]
hsa-miR-539-5p SHISA9
PAR-CLIP [5]
hsa-miR-539-5p BUB1
PAR-CLIP [5]
hsa-miR-539-5p OPHN1
PAR-CLIP [5]
hsa-miR-539-5p COCH
PAR-CLIP [5]
hsa-miR-539-5p GLO1
PAR-CLIP [4] [5]
hsa-miR-539-5p SLC25A46
PAR-CLIP [5]
hsa-miR-539-5p ZKSCAN8
PAR-CLIP [5]
hsa-miR-539-5p ZNF367
PAR-CLIP [4] [5]
hsa-miR-539-5p SLC39A14
PAR-CLIP [5]
hsa-miR-539-5p SAR1A
PAR-CLIP [5]
hsa-miR-539-5p ENPP5
PAR-CLIP [4] [5]
hsa-miR-539-5p MCM4
PAR-CLIP [5]
hsa-miR-539-5p TP53RK
PAR-CLIP [4] [5]
hsa-miR-539-5p ABRACL
PAR-CLIP [5]
hsa-miR-539-5p RNF157
PAR-CLIP [5]
hsa-miR-539-5p ZIK1
PAR-CLIP [4] [5]
hsa-miR-539-5p STK11IP
PAR-CLIP [5]
hsa-miR-539-5p PTPDC1
PAR-CLIP [5]
hsa-miR-539-5p PPP1R37
PAR-CLIP [5]
hsa-miR-539-5p TRMT112
PAR-CLIP [4]
hsa-miR-539-5p RNPS1
PAR-CLIP [4]
hsa-miR-539-5p OSBPL3
PAR-CLIP [4]
hsa-miR-539-5p ZNF652
PAR-CLIP [4]
hsa-miR-539-5p GRWD1
PAR-CLIP [4]
hsa-miR-539-5p ZWINT
PAR-CLIP [4]
hsa-miR-539-5p BASP1
PAR-CLIP [4]
hsa-miR-539-5p CBX6
PAR-CLIP [4]
hsa-miR-539-5p SF1
PAR-CLIP [4]
hsa-miR-539-5p SPINT2
PAR-CLIP [4]
hsa-miR-539-5p PARP15
HITS-CLIP [11]
hsa-miR-539-5p HRASLS5
HITS-CLIP [12]
hsa-miR-539-5p COX17
HITS-CLIP [12]
hsa-miR-539-5p ZNF226
HITS-CLIP [12]
hsa-miR-539-5p NFAM1
HITS-CLIP [9] [12]
hsa-miR-539-5p HS3ST5
HITS-CLIP [12]
hsa-miR-539-5p SPOP
HITS-CLIP [12]
hsa-miR-539-5p ZNF660
HITS-CLIP [12]
hsa-miR-539-5p PSMC1
HITS-CLIP [12]
hsa-miR-539-5p PPP1R15A
HITS-CLIP [12]
hsa-miR-539-5p RANBP2
HITS-CLIP [12]
hsa-miR-539-5p PTCD2
HITS-CLIP [12]
hsa-miR-539-5p KDM7A
HITS-CLIP [12]
hsa-miR-539-5p CLCN3
HITS-CLIP [12]
hsa-miR-539-5p HIST1H3B
HITS-CLIP [10]
hsa-miR-539-5p UBQLN1
HITS-CLIP [10]
hsa-miR-539-5p EDEM3
HITS-CLIP [10]
hsa-miR-539-5p ARL6IP1
HITS-CLIP [10]
hsa-miR-539-5p SIPA1L1
HITS-CLIP [9]
hsa-miR-539-5p C10orf105
HITS-CLIP [9]
hsa-miR-539-5p DPY19L4
HITS-CLIP [9]
hsa-miR-539-5p PUS7L
HITS-CLIP [9]

References

authors journal year Pubmed link title
1 Haga et al. J. Biol. Chem. 2012 23105110 MicroRNAs in the imprinted DLK1-DIO3 region repress the epithelial-to-mesenchymal transition by targeting the TWIST1 protein signaling network.
2 Lipchina et al. Genes Dev. 2011 22012620 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
3 Memczak et al. Nature 2013 23446348 Circular RNAs are a large class of animal RNAs with regulatory potency.
4 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
5 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
6 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
7 Kameswaran et al. Cell Metab. 2014 24374217 Epigenetic regulation of the DLK1-MEG3 microRNA cluster in human type 2 diabetic islets.
8 Gottwein et al. Cell Host Microbe 2011 22100165 Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines.
9 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
10 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
11 Pillai et al. Breast Cancer Res. Treat. 2014 24906430 HITS-CLIP reveals key regulators of nuclear receptor signaling in breast cancer.
12 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
13 Farazi et al. Genome Biol. 2014 24398324 Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets.
14 Skalsky et al. PLoS Pathog. 2012 22291592 The viral and cellular microRNA targetome in lymphoblastoid cell lines.
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