miRNA | gene name | experiments | ||||||
---|---|---|---|---|---|---|---|---|
hsa-miR-939-3p | GABARAPL1 |
|
||||||
hsa-miR-939-3p | CNBP |
|
||||||
hsa-miR-939-3p | PLCXD2 |
|
||||||
hsa-miR-939-3p | HIP1 |
|
||||||
hsa-miR-939-3p | CLPX |
|
||||||
hsa-miR-939-3p | POLR2J3 |
|
||||||
hsa-miR-939-3p | VAV3 |
|
||||||
hsa-miR-939-3p | UPK3BL1 |
|
||||||
hsa-miR-939-3p | TRIP10 |
|
||||||
hsa-miR-939-3p | TRIM44 |
|
||||||
hsa-miR-939-3p | SLC16A1 |
|
||||||
hsa-miR-939-3p | NUFIP2 |
|
||||||
hsa-miR-939-3p | LRRC58 |
|
||||||
hsa-miR-939-3p | IKZF3 |
|
||||||
hsa-miR-939-3p | CTNS |
|
||||||
hsa-miR-939-3p | CALR |
|
||||||
hsa-miR-939-3p | C7orf73 |
|
||||||
hsa-miR-939-3p | AVL9 |
|
||||||
hsa-miR-939-3p | ATXN7L3 |
|
||||||
hsa-miR-939-3p | AMOTL2 |
|
||||||
hsa-miR-939-3p | KHSRP |
|
||||||
hsa-miR-939-3p | EEPD1 |
|
||||||
hsa-miR-939-3p | SCARF2 |
|
||||||
hsa-miR-939-3p | PPIC |
|
||||||
hsa-miR-939-3p | PSMD3 |
|
||||||
hsa-miR-939-3p | PRX |
|
||||||
hsa-miR-939-3p | NANOS1 |
|
||||||
hsa-miR-939-3p | BTF3L4 |
|
||||||
hsa-miR-939-3p | PADI3 |
|
||||||
hsa-miR-939-3p | ADAMTS17 |
|
||||||
hsa-miR-939-3p | ZBTB40 |
|
||||||
hsa-miR-939-3p | ZNF460 |
|
||||||
hsa-miR-939-3p | PIK3R1 |
|
||||||
hsa-miR-939-3p | FEM1B |
|
||||||
hsa-miR-939-3p | F8A2 |
|
||||||
hsa-miR-939-3p | F8A3 |
|
||||||
hsa-miR-939-3p | UGDH |
|
||||||
hsa-miR-939-3p | C1orf35 |
|
||||||
hsa-miR-939-3p | MLH1 |
|
||||||
hsa-miR-939-3p | DNAAF3 |
|
||||||
hsa-miR-939-3p | S100A2 |
|
||||||
hsa-miR-939-3p | NOM1 |
|
||||||
hsa-miR-939-3p | RUNX1 |
|
||||||
hsa-miR-939-3p | CNKSR3 |
|
||||||
hsa-miR-939-3p | SSH2 |
|
||||||
hsa-miR-939-3p | ZBTB44 |
|
||||||
hsa-miR-939-3p | EIF3H |
|
||||||
hsa-miR-939-3p | DNAH10OS |
|
||||||
hsa-miR-939-3p | EMC1 |
|
||||||
hsa-miR-939-3p | GAPVD1 |
|
||||||
hsa-miR-939-3p | SLC24A4 |
|
||||||
hsa-miR-939-3p | DNAJC28 |
|
||||||
hsa-miR-939-3p | SSH3 |
|
||||||
hsa-miR-939-3p | NPY4R |
|
||||||
hsa-miR-939-3p | SAMD5 |
|
||||||
hsa-miR-939-3p | RGS17 |
|
||||||
hsa-miR-939-3p | PIGR |
|
||||||
hsa-miR-939-3p | FAM83F |
|
||||||
hsa-miR-939-3p | CXCL10 |
|
||||||
hsa-miR-939-3p | ZNF417 |
|
||||||
hsa-miR-939-3p | F2RL2 |
|
||||||
hsa-miR-939-3p | ZBTB24 |
|
||||||
hsa-miR-939-3p | SRSF9 |
|
||||||
hsa-miR-939-3p | PON1 |
|
||||||
hsa-miR-939-3p | G3BP1 |
|
||||||
hsa-miR-939-3p | TOR1AIP1 |
|
||||||
hsa-miR-939-3p | ZNF43 |
|
||||||
hsa-miR-939-3p | PARP2 |
|
||||||
hsa-miR-939-3p | ATP8B3 |
|
||||||
hsa-miR-939-3p | ZC3HAV1 |
|
||||||
hsa-miR-939-3p | TBCCD1 |
|
||||||
hsa-miR-939-3p | SMU1 |
|
||||||
hsa-miR-939-3p | PLIN5 |
|
||||||
hsa-miR-939-3p | VWA7 |
|
||||||
hsa-miR-939-3p | ORC1 |
|
||||||
hsa-miR-939-3p | XRCC2 |
|
||||||
hsa-miR-939-3p | PEX2 |
|
||||||
hsa-miR-939-3p | FUT1 |
|
||||||
hsa-miR-939-3p | GON7 |
|
||||||
hsa-miR-939-3p | FUT9 |
|
||||||
hsa-miR-939-3p | POLR3K |
|
||||||
hsa-miR-939-3p | QTRT2 |
|
||||||
hsa-miR-939-3p | LIMD1 |
|
||||||
hsa-miR-939-3p | PAICS |
|
||||||
hsa-miR-939-3p | ZNF331 |
|
||||||
hsa-miR-939-3p | C3 |
|
||||||
hsa-miR-939-3p | AKR7A2 |
|
||||||
hsa-miR-939-3p | APOC3 |
|
||||||
hsa-miR-939-3p | WDR13 |
|
||||||
hsa-miR-939-3p | MRPS10 |
|
||||||
hsa-miR-939-3p | TIMM8A |
|
||||||
hsa-miR-939-3p | RPS15A |
|
||||||
hsa-miR-939-3p | PLEKHA3 |
|
||||||
hsa-miR-939-3p | PDE12 |
|
||||||
hsa-miR-939-3p | TNRC18P2 |
|
||||||
hsa-miR-939-3p | BAG1 |
|
||||||
hsa-miR-939-3p | F2 |
|
||||||
hsa-miR-939-3p | COX6B1 |
|
||||||
hsa-miR-939-3p | ABL2 |
|
||||||
hsa-miR-939-3p | AGO2 |
|
||||||
hsa-miR-939-3p | PAPLN |
|
||||||
hsa-miR-939-3p | CERS1 |
|
||||||
hsa-miR-939-3p | CDCP1 |
|
||||||
hsa-miR-939-3p | LANCL3 |
|
||||||
hsa-miR-939-3p | ZNF543 |
|
||||||
hsa-miR-939-3p | GMPR |
|
||||||
hsa-miR-939-3p | ZNF488 |
|
||||||
hsa-miR-939-3p | HOXB5 |
|
||||||
hsa-miR-939-3p | ZSCAN2 |
|
||||||
hsa-miR-939-3p | FAM227A |
|
||||||
hsa-miR-939-3p | RUSC2 |
|
||||||
hsa-miR-939-3p | ANO7 |
|
||||||
hsa-miR-939-3p | LILRA2 |
|
||||||
hsa-miR-939-3p | SRPX2 |
|
||||||
hsa-miR-939-3p | PXMP4 |
|
||||||
hsa-miR-939-3p | POU2F3 |
|
||||||
hsa-miR-939-3p | FUS |
|
||||||
hsa-miR-939-3p | BDP1 |
|
||||||
hsa-miR-939-3p | DIS3L |
|
||||||
hsa-miR-939-3p | KDM2B |
|
||||||
hsa-miR-939-3p | MSANTD3 |
|
||||||
hsa-miR-939-3p | CBS |
|
||||||
hsa-miR-939-3p | BBS5 |
|
||||||
hsa-miR-939-3p | VEGFC |
|
||||||
hsa-miR-939-3p | GOSR1 |
|
||||||
hsa-miR-939-3p | ELOVL6 |
|
||||||
hsa-miR-939-3p | C6orf132 |
|
||||||
hsa-miR-939-3p | SLC35E2 |
|
||||||
hsa-miR-939-3p | SENP8 |
|
||||||
hsa-miR-939-3p | GK5 |
|
||||||
hsa-miR-939-3p | RBL1 |
|
||||||
hsa-miR-939-3p | SLC11A2 |
|
||||||
hsa-miR-939-3p | CHAF1B |
|
||||||
hsa-miR-939-3p | APTX |
|
||||||
hsa-miR-939-3p | DEFB105B |
|
||||||
hsa-miR-939-3p | DEFB105A |
|
||||||
hsa-miR-939-3p | GGPS1 |
|
||||||
hsa-miR-939-3p | PANK3 |
|
||||||
hsa-miR-939-3p | GSR |
|
||||||
hsa-miR-939-3p | ZNF785 |
|
||||||
hsa-miR-939-3p | ENTPD1 |
|
||||||
hsa-miR-939-3p | ANKFY1 |
|
||||||
hsa-miR-939-3p | SLC25A16 |
|
||||||
hsa-miR-939-3p | SMAGP |
|
||||||
hsa-miR-939-3p | CLUAP1 |
|
||||||
hsa-miR-939-3p | RNF135 |
|
||||||
hsa-miR-939-3p | LETM2 |
|
||||||
hsa-miR-939-3p | PRSS21 |
|
||||||
hsa-miR-939-3p | TRIM16L |
|
||||||
hsa-miR-939-3p | HES2 |
|
||||||
hsa-miR-939-3p | MRPS16 |
|
||||||
hsa-miR-939-3p | NPR1 |
|
||||||
hsa-miR-939-3p | MGST3 |
|
||||||
hsa-miR-939-3p | ALDH5A1 |
|
||||||
hsa-miR-939-3p | MCCC2 |
|
||||||
hsa-miR-939-3p | ASB8 |
|
||||||
hsa-miR-939-3p | FRMD8 |
|
||||||
hsa-miR-939-3p | FAM192A |
|
||||||
hsa-miR-939-3p | ZNF626 |
|
||||||
hsa-miR-939-3p | ACAD8 |
|
||||||
hsa-miR-939-3p | IGSF6 |
|
||||||
hsa-miR-939-3p | ZBTB16 |
|
||||||
hsa-miR-939-3p | USP49 |
|
||||||
hsa-miR-939-3p | TMEM181 |
|
||||||
hsa-miR-939-3p | TACO1 |
|
||||||
hsa-miR-939-3p | STX1B |
|
||||||
hsa-miR-939-3p | PRKAR2A |
|
||||||
hsa-miR-939-3p | PHAX |
|
||||||
hsa-miR-939-3p | OTUD7B |
|
||||||
hsa-miR-939-3p | NEK9 |
|
||||||
hsa-miR-939-3p | LYRM7 |
|
||||||
hsa-miR-939-3p | GPR75 |
|
||||||
hsa-miR-939-3p | GJD3 |
|
||||||
hsa-miR-939-3p | EMC3 |
|
||||||
hsa-miR-939-3p | ALG14 |
|
||||||
hsa-miR-939-3p | ABHD2 |
|
||||||
hsa-miR-939-3p | S1PR2 |
|
||||||
hsa-miR-939-3p | TBC1D15 |
|
||||||
hsa-miR-939-3p | PRPSAP1 |
|
||||||
hsa-miR-939-3p | ZNF445 |
|
||||||
hsa-miR-939-3p | SLC16A4 |
|
||||||
hsa-miR-939-3p | ORAI2 |
|
||||||
hsa-miR-939-3p | POFUT2 |
|
||||||
hsa-miR-939-3p | ELK1 |
|
||||||
hsa-miR-939-3p | SF3A1 |
|
||||||
hsa-miR-939-3p | TUBD1 |
|
||||||
hsa-miR-939-3p | SCRG1 |
|
||||||
hsa-miR-939-3p | RNF170 |
|
||||||
hsa-miR-939-3p | RNF115 |
|
||||||
hsa-miR-939-3p | PI4K2B |
|
||||||
hsa-miR-939-3p | NAV1 |
|
||||||
hsa-miR-939-3p | MYPN |
|
||||||
hsa-miR-939-3p | HAUS3 |
|
||||||
hsa-miR-939-3p | GDE1 |
|
||||||
hsa-miR-939-3p | FKBP5 |
|
||||||
hsa-miR-939-3p | C17orf75 |
|
||||||
hsa-miR-939-3p | BMP3 |
|
||||||
hsa-miR-939-3p | ZBTB8B |
|
||||||
hsa-miR-939-3p | ABCF3 |
|
||||||
hsa-miR-939-3p | ADK |
|
||||||
hsa-miR-939-3p | KLHDC8A |
|
||||||
hsa-miR-939-3p | HPSE |
|
||||||
hsa-miR-939-3p | ZNF333 |
|
||||||
hsa-miR-939-3p | FAM229B |
|
||||||
hsa-miR-939-3p | ZNF347 |
|
||||||
hsa-miR-939-3p | ARL10 |
|
||||||
hsa-miR-939-3p | SVOP |
|
||||||
hsa-miR-939-3p | HACE1 |
|
||||||
hsa-miR-939-3p | MED28 |
|
||||||
hsa-miR-939-3p | VSIG1 |
|
||||||
hsa-miR-939-3p | METTL14 |
|
||||||
hsa-miR-939-3p | SHROOM4 |
|
||||||
hsa-miR-939-3p | SMIM15 |
|
||||||
hsa-miR-939-3p | CAVIN4 |
|
||||||
hsa-miR-939-3p | SNRPD1 |
|
||||||
hsa-miR-939-3p | POC1A |
|
||||||
hsa-miR-939-3p | SLC10A6 |
|
||||||
hsa-miR-939-3p | OCIAD2 |
|
||||||
hsa-miR-939-3p | ALG1 |
|
||||||
hsa-miR-939-3p | UGGT1 |
|
||||||
hsa-miR-939-3p | PNPLA3 |
|
||||||
hsa-miR-939-3p | ZNF519 |
|
||||||
hsa-miR-939-3p | SLC4A4 |
|
||||||
hsa-miR-939-3p | CSNK1E |
|
||||||
hsa-miR-939-3p | VTA1 |
|
||||||
hsa-miR-939-3p | OLFML2A |
|
||||||
hsa-miR-939-3p | DHTKD1 |
|
||||||
hsa-miR-939-3p | NUPL2 |
|
||||||
hsa-miR-939-3p | OGFOD1 |
|
||||||
hsa-miR-939-3p | LACTB |
|
||||||
hsa-miR-939-3p | PURB |
|
||||||
hsa-miR-939-3p | SYK |
|
||||||
hsa-miR-939-3p | SSBP2 |
|
||||||
hsa-miR-939-3p | LIN9 |
|
||||||
hsa-miR-939-3p | CABP4 |
|
||||||
hsa-miR-939-3p | GTDC1 |
|
||||||
hsa-miR-939-3p | AS3MT |
|
||||||
hsa-miR-939-3p | E2F2 |
|
||||||
hsa-miR-939-3p | OXA1L |
|
||||||
hsa-miR-939-3p | AAED1 |
|
||||||
hsa-miR-939-3p | KCNE4 |
|
||||||
hsa-miR-939-3p | RBM28 |
|
||||||
hsa-miR-939-3p | LIX1L |
|
||||||
hsa-miR-939-3p | EIF4EBP1 |
|
||||||
hsa-miR-939-3p | MDM2 |
|
||||||
hsa-miR-939-3p | TMCO1 |
|
||||||
hsa-miR-939-3p | TRMO |
|
||||||
hsa-miR-939-3p | MIGA1 |
|
||||||
hsa-miR-939-3p | ZNF292 |
|
||||||
hsa-miR-939-3p | RPL12 |
|
||||||
hsa-miR-939-3p | NF2 |
|
||||||
hsa-miR-939-3p | SUSD5 |
|
||||||
hsa-miR-939-3p | PSMB9 |
|
||||||
hsa-miR-939-3p | MOG |
|
||||||
hsa-miR-939-3p | C20orf144 |
|
||||||
hsa-miR-939-3p | MCTS1 |
|
||||||
hsa-miR-939-3p | OR7D2 |
|
||||||
hsa-miR-939-3p | C1orf158 |
|
||||||
hsa-miR-939-3p | PLXNA3 |
|
||||||
hsa-miR-939-3p | NFATC2IP |
|
||||||
hsa-miR-939-3p | NCKAP1 |
|
||||||
hsa-miR-939-3p | FITM2 |
|
||||||
hsa-miR-939-3p | FAM151B |
|
||||||
hsa-miR-939-3p | CNDP1 |
|
||||||
hsa-miR-939-3p | ANGPTL3 |
|
||||||
hsa-miR-939-3p | IRAK1BP1 |
|
||||||
hsa-miR-939-3p | RPS19 |
|
||||||
hsa-miR-939-3p | C5AR2 |
|
||||||
hsa-miR-939-3p | ZNF101 |
|
||||||
hsa-miR-939-3p | RBM23 |
|
||||||
hsa-miR-939-3p | PPIL6 |
|
||||||
hsa-miR-939-3p | C17orf105 |
|
||||||
hsa-miR-939-3p | FAHD1 |
|
||||||
hsa-miR-939-3p | GLG1 |
|
||||||
hsa-miR-939-3p | DNA2 |
|
||||||
hsa-miR-939-3p | ALDH1B1 |
|
||||||
hsa-miR-939-3p | PARD3 |
|
||||||
hsa-miR-939-3p | CENPL |
|
||||||
hsa-miR-939-3p | ZNF383 |
|
||||||
hsa-miR-939-3p | PPIL4 |
|
||||||
hsa-miR-939-3p | NLRP9 |
|
||||||
hsa-miR-939-3p | AAR2 |
|
||||||
hsa-miR-939-3p | STX4 |
|
||||||
hsa-miR-939-3p | ANKS4B |
|
||||||
hsa-miR-939-3p | PLAC8 |
|
||||||
hsa-miR-939-3p | MRPS21 |
|
||||||
hsa-miR-939-3p | LYZ |
|
||||||
hsa-miR-939-3p | DOCK7 |
|
||||||
hsa-miR-939-3p | ZYG11A |
|
||||||
hsa-miR-939-3p | UBXN2A |
|
||||||
hsa-miR-939-3p | TVP23C |
|
||||||
hsa-miR-939-3p | TGFBR1 |
|
||||||
hsa-miR-939-3p | SIX4 |
|
||||||
hsa-miR-939-3p | SAR1A |
|
||||||
hsa-miR-939-3p | PTPRF |
|
||||||
hsa-miR-939-3p | FAM234B |
|
||||||
hsa-miR-939-3p | ITPRIPL2 |
|
||||||
hsa-miR-939-3p | IRGQ |
|
||||||
hsa-miR-939-3p | HMX3 |
|
||||||
hsa-miR-939-3p | HERPUD2 |
|
||||||
hsa-miR-939-3p | RTL8C |
|
||||||
hsa-miR-939-3p | DDX19B |
|
||||||
hsa-miR-939-3p | DCTN6 |
|
||||||
hsa-miR-939-3p | CHRFAM7A |
|
||||||
hsa-miR-939-3p | TRUB2 |
|
||||||
hsa-miR-939-3p | MTRF1L |
|
||||||
hsa-miR-939-3p | KCNK1 |
|
||||||
hsa-miR-939-3p | MSH3 |
|
||||||
hsa-miR-939-3p | KCNC3 |
|
||||||
hsa-miR-939-3p | PHF7 |
|
||||||
hsa-miR-939-3p | SHE |
|
||||||
hsa-miR-939-3p | MT1A |
|
||||||
hsa-miR-939-3p | TERF1 |
|
||||||
hsa-miR-939-3p | RNF125 |
|
||||||
hsa-miR-939-3p | POLR2E |
|
||||||
hsa-miR-939-3p | TMPRSS11BNL |
|
||||||
hsa-miR-939-3p | MPPED1 |
|
||||||
hsa-miR-939-3p | DSTYK |
|
||||||
hsa-miR-939-3p | PSMF1 |
|
||||||
hsa-miR-939-3p | CDT1 |
|
||||||
hsa-miR-939-3p | ITPKB |
|
||||||
hsa-miR-939-3p | SNRPD3 |
|
||||||
hsa-miR-939-3p | CBX5 |
|
||||||
hsa-miR-939-3p | SPRED3 |
|
||||||
hsa-miR-939-3p | PHKG2 |
|
||||||
hsa-miR-939-3p | CRCP |
|
||||||
hsa-miR-939-3p | SH3D19 |
|
||||||
hsa-miR-939-3p | PLXNA2 |
|
||||||
hsa-miR-939-3p | COA4 |
|
||||||
hsa-miR-939-3p | RNPEPL1 |
|
authors | journal | year | Pubmed link | title | |
---|---|---|---|---|---|
1 | Kishore et al. | Nat. Methods | 2011 | 21572407 | A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins. |
2 | Gottwein et al. | Cell Host Microbe | 2011 | 22100165 | Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines. |
3 | Whisnant et al. | MBio | 2013 | 23592263 | In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms. |
4 | Hafner et al. | Cell | 2010 | 20371350 | Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP. |
5 | Karginov et al. | Genes Dev. | 2013 | 23824327 | Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates. |
6 | Memczak et al. | Nature | 2013 | 23446348 | Circular RNAs are a large class of animal RNAs with regulatory potency. |
7 | Farazi et al. | Genome Biol. | 2014 | 24398324 | Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets. |
8 | Lipchina et al. | Genes Dev. | 2011 | 22012620 | Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response. |
9 | Skalsky et al. | PLoS Pathog. | 2012 | 22291592 | The viral and cellular microRNA targetome in lymphoblastoid cell lines. |
10 | Majoros et al. | Nat. Methods | 2013 | 23708386 | MicroRNA target site identification by integrating sequence and binding information. |
11 | Kishore et al. | Genome Biol. | 2013 | 23706177 | Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing. |
12 | Xue et al. | Cell | 2013 | 23313552 | Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits. |
13 | Pillai et al. | Breast Cancer Res. Treat. | 2014 | 24906430 | HITS-CLIP reveals key regulators of nuclear receptor signaling in breast cancer. |
14 | Chi et al. | Nature | 2009 | 19536157 | Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps. |