Targets miRBase

hsa-miR-5004-5p (MIMAT0021027) (45 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-5004-5p ADNP2
HITS-CLIP [1]
hsa-miR-5004-5p KPNA2
PAR-CLIP [2] [3] [4]
hsa-miR-5004-5p SCD
PAR-CLIP [3]
hsa-miR-5004-5p HMGN2
PAR-CLIP [5]
hsa-miR-5004-5p COX6B1
PAR-CLIP [2]
hsa-miR-5004-5p HIPK1
PAR-CLIP [2]
hsa-miR-5004-5p METTL12
PAR-CLIP [6]
hsa-miR-5004-5p VNN1
PAR-CLIP [6]
hsa-miR-5004-5p ELP2
PAR-CLIP [6]
hsa-miR-5004-5p FEM1C
PAR-CLIP [6]
hsa-miR-5004-5p ANXA11
PAR-CLIP [6]
hsa-miR-5004-5p ZNF74
PAR-CLIP [6]
hsa-miR-5004-5p ZNF99
PAR-CLIP [4]
hsa-miR-5004-5p CDCA3
PAR-CLIP [5] [4]
hsa-miR-5004-5p ACSF2
PAR-CLIP [4]
hsa-miR-5004-5p CD207
PAR-CLIP [4]
hsa-miR-5004-5p ARHGAP39
PAR-CLIP [4]
hsa-miR-5004-5p PCYT1A
PAR-CLIP [4]
hsa-miR-5004-5p METTL1
PAR-CLIP [4]
hsa-miR-5004-5p NDUFA2
PAR-CLIP [4]
hsa-miR-5004-5p NECAB3
PAR-CLIP [4]
hsa-miR-5004-5p ZNF275
PAR-CLIP [3] [4]
hsa-miR-5004-5p RAI1
PAR-CLIP [2] [4]
hsa-miR-5004-5p RAB40C
PAR-CLIP [4]
hsa-miR-5004-5p NOLC1
PAR-CLIP [4]
hsa-miR-5004-5p NFIC
PAR-CLIP [2] [4]
hsa-miR-5004-5p LRRC20
PAR-CLIP [4]
hsa-miR-5004-5p CITED4
PAR-CLIP [2] [4]
hsa-miR-5004-5p COL12A1
PAR-CLIP [4]
hsa-miR-5004-5p AJAP1
PAR-CLIP [7]
hsa-miR-5004-5p TMEM30B
PAR-CLIP [8]
hsa-miR-5004-5p SHOX2
PAR-CLIP [5] [3]
hsa-miR-5004-5p KLHL15
PAR-CLIP [5]
hsa-miR-5004-5p FANCA
PAR-CLIP [9]
hsa-miR-5004-5p EIF1AX
PAR-CLIP [3]
hsa-miR-5004-5p SCML2
PAR-CLIP [2]
hsa-miR-5004-5p SLC27A1
PAR-CLIP [2]
hsa-miR-5004-5p THRA
PAR-CLIP [2]
hsa-miR-5004-5p SOCS7
HITS-CLIP [10]
hsa-miR-5004-5p GALNT10
HITS-CLIP [10]
hsa-miR-5004-5p C8orf82
HITS-CLIP [10]
hsa-miR-5004-5p ERCC6L2
HITS-CLIP [10]
hsa-miR-5004-5p ZNF101
HITS-CLIP [1]
hsa-miR-5004-5p ZCCHC14
HITS-CLIP [11]
hsa-miR-5004-5p TNS1
HITS-CLIP [11]

References

authors journal year Pubmed link title
1 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
2 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
3 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
4 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
5 Memczak et al. Nature 2013 23446348 Circular RNAs are a large class of animal RNAs with regulatory potency.
6 Gottwein et al. Cell Host Microbe 2011 22100165 Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines.
7 Skalsky et al. PLoS Pathog. 2012 22291592 The viral and cellular microRNA targetome in lymphoblastoid cell lines.
8 Farazi et al. Genome Biol. 2014 24398324 Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets.
9 Lipchina et al. Genes Dev. 2011 22012620 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
10 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
11 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.