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hsa-miR-642a-3p (MIMAT0020924) (73 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-642a-3p ZNF543
PAR-CLIP [1]
hsa-miR-642a-3p BHLHB9
PAR-CLIP [1]
hsa-miR-642a-3p ZNF350
PAR-CLIP [2]
hsa-miR-642a-3p EXOG
PAR-CLIP [3]
hsa-miR-642a-3p TRAM1
PAR-CLIP [3]
hsa-miR-642a-3p GRK2
PAR-CLIP [3]
hsa-miR-642a-3p SH3PXD2A
PAR-CLIP [3]
hsa-miR-642a-3p SETD3
PAR-CLIP [3]
hsa-miR-642a-3p RNF168
PAR-CLIP [3]
hsa-miR-642a-3p OXR1
PAR-CLIP [3]
hsa-miR-642a-3p EOGT
PAR-CLIP [3] [1]
hsa-miR-642a-3p CDC25B
PAR-CLIP [3]
hsa-miR-642a-3p AFF4
PAR-CLIP [1] [3]
hsa-miR-642a-3p LARP4B
PAR-CLIP [3]
hsa-miR-642a-3p USP22
PAR-CLIP [3]
hsa-miR-642a-3p MEF2D
PAR-CLIP [3]
hsa-miR-642a-3p FOXN3
PAR-CLIP [1] [3]
hsa-miR-642a-3p NCBP3
PAR-CLIP [4]
hsa-miR-642a-3p TXNIP
PAR-CLIP [5]
hsa-miR-642a-3p PPP4R3A
PAR-CLIP [5]
hsa-miR-642a-3p ZNF257
HITS-CLIP [6]
PAR-CLIP [7]
hsa-miR-642a-3p QSER1
PAR-CLIP [7]
hsa-miR-642a-3p AGPAT5
PAR-CLIP [7]
hsa-miR-642a-3p SYNCRIP
PAR-CLIP [1]
hsa-miR-642a-3p NRAS
PAR-CLIP [1]
hsa-miR-642a-3p MAP3K5
PAR-CLIP [1]
hsa-miR-642a-3p ZSWIM1
PAR-CLIP [2]
hsa-miR-642a-3p HMGB1
PAR-CLIP [2]
hsa-miR-642a-3p LRRC6
PAR-CLIP [2]
hsa-miR-642a-3p SYK
HITS-CLIP [8] [9]
hsa-miR-642a-3p PINX1
HITS-CLIP [10]
hsa-miR-642a-3p PIGS
HITS-CLIP [10]
hsa-miR-642a-3p PNMA8A
HITS-CLIP [11] [10]
hsa-miR-642a-3p YY2
HITS-CLIP [10]
hsa-miR-642a-3p MVK
HITS-CLIP [10]
hsa-miR-642a-3p MPP2
HITS-CLIP [10]
hsa-miR-642a-3p OTUD7A
HITS-CLIP [10]
hsa-miR-642a-3p NDUFB5
HITS-CLIP [10]
hsa-miR-642a-3p SPTLC3
HITS-CLIP [11] [10]
hsa-miR-642a-3p ABHD17B
HITS-CLIP [10]
hsa-miR-642a-3p MYO1H
HITS-CLIP [10]
hsa-miR-642a-3p SNRPD1
HITS-CLIP [10]
hsa-miR-642a-3p SMYD1
HITS-CLIP [10]
hsa-miR-642a-3p MTX3
HITS-CLIP [10]
hsa-miR-642a-3p KIAA0408
HITS-CLIP [11] [10]
hsa-miR-642a-3p ACAP2
HITS-CLIP [10]
hsa-miR-642a-3p SHROOM1
HITS-CLIP [10]
hsa-miR-642a-3p HIP1
HITS-CLIP [10]
hsa-miR-642a-3p SGIP1
HITS-CLIP [10]
hsa-miR-642a-3p SOGA3
HITS-CLIP [11] [10]
hsa-miR-642a-3p BAZ2A
HITS-CLIP [10] [12]
hsa-miR-642a-3p COX18
HITS-CLIP [11] [10]
hsa-miR-642a-3p CACNA1B
HITS-CLIP [10]
hsa-miR-642a-3p SIGLEC9
HITS-CLIP [10]
hsa-miR-642a-3p EXOC5
HITS-CLIP [10]
hsa-miR-642a-3p ATXN3
HITS-CLIP [10]
hsa-miR-642a-3p LRTM1
HITS-CLIP [10]
hsa-miR-642a-3p ITPKC
HITS-CLIP [10]
hsa-miR-642a-3p ABCA12
HITS-CLIP [10]
hsa-miR-642a-3p RPL18A
HITS-CLIP [10]
hsa-miR-642a-3p FOLR1
HITS-CLIP [11]
hsa-miR-642a-3p CRTC3
HITS-CLIP [11]
hsa-miR-642a-3p SPPL2A
HITS-CLIP [11]
hsa-miR-642a-3p PDE4D
HITS-CLIP [11]
hsa-miR-642a-3p MTMR12
HITS-CLIP [11]
hsa-miR-642a-3p INSIG1
HITS-CLIP [11]
hsa-miR-642a-3p C5orf15
HITS-CLIP [11]
hsa-miR-642a-3p BRWD1
HITS-CLIP [11]
hsa-miR-642a-3p HNRNPU
HITS-CLIP [12]
hsa-miR-642a-3p KRTAP19-1
HITS-CLIP [8]
hsa-miR-642a-3p RANBP2
HITS-CLIP [8]
hsa-miR-642a-3p SDHAF2
HITS-CLIP [8]
hsa-miR-642a-3p MTF2
HITS-CLIP [8]

References

authors journal year Pubmed link title
1 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
2 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
3 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
4 Skalsky et al. PLoS Pathog. 2012 22291592 The viral and cellular microRNA targetome in lymphoblastoid cell lines.
5 Farazi et al. Genome Biol. 2014 24398324 Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets.
6 Kishore et al. Genome Biol. 2013 23706177 Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing.
7 Lipchina et al. Genes Dev. 2011 22012620 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
8 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
9 Pillai et al. Breast Cancer Res. Treat. 2014 24906430 HITS-CLIP reveals key regulators of nuclear receptor signaling in breast cancer.
10 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
11 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
12 Haecker et al. PLoS Pathog. 2012 22927820 Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas.
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