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hsa-miR-548ak (MIMAT0019013) (184 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-548ak DDIT4
PAR-CLIP [1] [2]
hsa-miR-548ak ETNK1
PAR-CLIP [3]
hsa-miR-548ak RAB8B
PAR-CLIP [2]
hsa-miR-548ak ACTN4
PAR-CLIP [1] [2] [4]
hsa-miR-548ak PTBP1
PAR-CLIP [4]
hsa-miR-548ak SLC5A3
PAR-CLIP [2] [4]
hsa-miR-548ak FOXN2
PAR-CLIP [4] [2]
hsa-miR-548ak MTHFD2
PAR-CLIP [1] [2] [4]
hsa-miR-548ak ABHD5
PAR-CLIP [4]
hsa-miR-548ak FEM1C
PAR-CLIP [5]
hsa-miR-548ak UBE2D2
PAR-CLIP [4]
hsa-miR-548ak BRIX1
PAR-CLIP [1]
hsa-miR-548ak FAM135A
PAR-CLIP [4]
hsa-miR-548ak CBX3
PAR-CLIP [2]
hsa-miR-548ak FOXK1
PAR-CLIP [2]
hsa-miR-548ak CLDN12
PAR-CLIP [2]
hsa-miR-548ak PEG10
PAR-CLIP [2] [4] [6]
hsa-miR-548ak MPZL1
PAR-CLIP [2]
hsa-miR-548ak BMI1
PAR-CLIP [2]
hsa-miR-548ak COMMD3-BMI1
PAR-CLIP [2]
hsa-miR-548ak UBE2D1
PAR-CLIP [2] [4] [7]
hsa-miR-548ak SAMD8
PAR-CLIP [5]
hsa-miR-548ak PAFAH1B2
PAR-CLIP [2] [4] [3]
hsa-miR-548ak CAPZA1
PAR-CLIP [1] [2] [7]
hsa-miR-548ak LEPROT
PAR-CLIP [2]
hsa-miR-548ak BACH1
PAR-CLIP [2]
hsa-miR-548ak ZBTB38
PAR-CLIP [6]
hsa-miR-548ak SMAD5
PAR-CLIP [6] [2]
hsa-miR-548ak IL6ST
PAR-CLIP [6]
hsa-miR-548ak CCNB1
PAR-CLIP [2] [3]
hsa-miR-548ak MDFIC
PAR-CLIP [6]
hsa-miR-548ak ANP32B
PAR-CLIP [1] [2]
hsa-miR-548ak TBC1D13
PAR-CLIP [2]
hsa-miR-548ak SH3BGRL
PAR-CLIP [4]
hsa-miR-548ak HMGN2
PAR-CLIP [4] [2]
hsa-miR-548ak XRCC6
PAR-CLIP [1] [2] [6]
hsa-miR-548ak YAP1
PAR-CLIP [2]
hsa-miR-548ak LRRC55
HITS-CLIP [4]
PAR-CLIP [1] [4]
hsa-miR-548ak SPRYD4
PAR-CLIP [7]
hsa-miR-548ak MAP2K1
PAR-CLIP [2]
hsa-miR-548ak DR1
PAR-CLIP [4]
hsa-miR-548ak RGPD4
PAR-CLIP [4]
hsa-miR-548ak PDE12
PAR-CLIP [4]
hsa-miR-548ak USP53
PAR-CLIP [7]
hsa-miR-548ak PRRC1
PAR-CLIP [2]
hsa-miR-548ak G3BP1
PAR-CLIP [2] [4]
hsa-miR-548ak ZNF711
PAR-CLIP [1]
hsa-miR-548ak FAM53C
PAR-CLIP [4]
hsa-miR-548ak NEK7
PAR-CLIP [5]
hsa-miR-548ak THRAP3
PAR-CLIP [2]
hsa-miR-548ak ITGB8
HITS-CLIP [8]
hsa-miR-548ak SPCS3
PAR-CLIP [4]
hsa-miR-548ak WBP4
PAR-CLIP [2] [4]
hsa-miR-548ak GRPEL2
PAR-CLIP [2]
hsa-miR-548ak ZNRF2
PAR-CLIP [5] [1] [2] [4]
hsa-miR-548ak GTF2H5
PAR-CLIP [5]
hsa-miR-548ak VLDLR
PAR-CLIP [5]
hsa-miR-548ak ZDHHC21
PAR-CLIP [5]
hsa-miR-548ak PRPS1L1
PAR-CLIP [5]
hsa-miR-548ak ZNF207
PAR-CLIP [5]
hsa-miR-548ak PTCHD1
PAR-CLIP [5] [9]
hsa-miR-548ak MCC
PAR-CLIP [5]
hsa-miR-548ak ZNF562
PAR-CLIP [5]
hsa-miR-548ak MRPS5
PAR-CLIP [5]
hsa-miR-548ak TM6SF1
PAR-CLIP [5]
hsa-miR-548ak PLET1
PAR-CLIP [5] [9]
hsa-miR-548ak SEM1
PAR-CLIP [5]
hsa-miR-548ak NECTIN3
PAR-CLIP [5]
hsa-miR-548ak ANKEF1
HITS-CLIP [4] [10]
PAR-CLIP [1] [2] [4] [6] [7]
hsa-miR-548ak KIF2C
PAR-CLIP [6]
hsa-miR-548ak YWHAE
PAR-CLIP [2] [4] [6] [1]
hsa-miR-548ak PHB2
PAR-CLIP [6]
hsa-miR-548ak MTMR6
HITS-CLIP [4]
PAR-CLIP [1] [2] [4] [6]
hsa-miR-548ak KLHL11
PAR-CLIP [2] [4] [6] [1]
hsa-miR-548ak GTPBP2
PAR-CLIP [6]
hsa-miR-548ak AGO2
PAR-CLIP [3] [6]
hsa-miR-548ak ALG9
PAR-CLIP [6]
hsa-miR-548ak ERH
PAR-CLIP [4] [6]
hsa-miR-548ak FAM3C
PAR-CLIP [6] [2] [3]
hsa-miR-548ak DDB1
PAR-CLIP [6]
hsa-miR-548ak IPMK
PAR-CLIP [6]
hsa-miR-548ak CEP120
PAR-CLIP [6]
hsa-miR-548ak ZBTB20
PAR-CLIP [9]
hsa-miR-548ak PTBP2
HITS-CLIP [4] [10]
PAR-CLIP [1] [2] [4] [7]
hsa-miR-548ak TMEM30B
PAR-CLIP [7]
hsa-miR-548ak SVOP
HITS-CLIP [4]
PAR-CLIP [1] [2] [4] [3] [7]
hsa-miR-548ak INHBA
PAR-CLIP [3] [7] [1] [2] [4]
hsa-miR-548ak TRIM37
PAR-CLIP [7]
hsa-miR-548ak SPPL2A
PAR-CLIP [4] [7]
hsa-miR-548ak SMG1
PAR-CLIP [2] [4] [7]
hsa-miR-548ak CLIP1
PAR-CLIP [7] [1] [2] [4]
hsa-miR-548ak CELSR3
PAR-CLIP [2] [4] [7]
hsa-miR-548ak CDK4
PAR-CLIP [1] [2] [4] [7]
hsa-miR-548ak ZNF154
HITS-CLIP [4]
PAR-CLIP [1] [2] [4]
hsa-miR-548ak GRM5
PAR-CLIP [1]
hsa-miR-548ak YOD1
PAR-CLIP [1]
hsa-miR-548ak RSBN1
PAR-CLIP [1] [2] [4] [3]
hsa-miR-548ak POLR1B
PAR-CLIP [1] [2]
hsa-miR-548ak NPM3
HITS-CLIP [4]
PAR-CLIP [2] [4] [1]
hsa-miR-548ak CYP20A1
PAR-CLIP [1]
hsa-miR-548ak TRA2B
PAR-CLIP [1]
hsa-miR-548ak TM9SF3
PAR-CLIP [1] [2] [4]
hsa-miR-548ak SHISA9
PAR-CLIP [4] [3]
hsa-miR-548ak ARL13B
PAR-CLIP [3]
hsa-miR-548ak RBM4B
PAR-CLIP [3]
hsa-miR-548ak TMEM41B
PAR-CLIP [3]
hsa-miR-548ak FRY
PAR-CLIP [3]
hsa-miR-548ak RAB32
PAR-CLIP [3]
hsa-miR-548ak SLC9A4
PAR-CLIP [4] [3]
hsa-miR-548ak PANX1
PAR-CLIP [3]
hsa-miR-548ak IKZF5
PAR-CLIP [3]
hsa-miR-548ak HMBOX1
PAR-CLIP [3]
hsa-miR-548ak GDE1
PAR-CLIP [4] [3]
hsa-miR-548ak EFNA5
PAR-CLIP [3]
hsa-miR-548ak CSE1L
PAR-CLIP [4] [3]
hsa-miR-548ak GPC4
PAR-CLIP [4]
hsa-miR-548ak PEX7
PAR-CLIP [4]
hsa-miR-548ak PARP15
PAR-CLIP [4]
hsa-miR-548ak XKR9
PAR-CLIP [4]
hsa-miR-548ak ESYT1
PAR-CLIP [4]
hsa-miR-548ak KLRC3
PAR-CLIP [4]
hsa-miR-548ak METTL8
PAR-CLIP [4]
hsa-miR-548ak ANGPTL3
PAR-CLIP [4]
hsa-miR-548ak ACSM2B
PAR-CLIP [4]
hsa-miR-548ak PRELID1
PAR-CLIP [4]
hsa-miR-548ak HIST1H2BD
PAR-CLIP [4]
hsa-miR-548ak SPC25
PAR-CLIP [4]
hsa-miR-548ak GIMAP4
PAR-CLIP [4]
hsa-miR-548ak SIK1
PAR-CLIP [4]
hsa-miR-548ak PTP4A1
PAR-CLIP [4]
hsa-miR-548ak KPNA1
PAR-CLIP [2] [4]
hsa-miR-548ak KATNAL1
PAR-CLIP [4]
hsa-miR-548ak CRNKL1
PAR-CLIP [4]
hsa-miR-548ak CHEK2
PAR-CLIP [2] [4]
hsa-miR-548ak RPL7L1
PAR-CLIP [2] [4]
hsa-miR-548ak TMEM241
PAR-CLIP [4]
hsa-miR-548ak MKLN1
PAR-CLIP [4]
hsa-miR-548ak XIAP
PAR-CLIP [2] [4]
hsa-miR-548ak UBE2H
PAR-CLIP [4]
hsa-miR-548ak SYNCRIP
PAR-CLIP [4]
hsa-miR-548ak SIX4
PAR-CLIP [4]
hsa-miR-548ak PCMTD1
PAR-CLIP [4]
hsa-miR-548ak MAP2K4
PAR-CLIP [4]
hsa-miR-548ak LIPA
PAR-CLIP [4]
hsa-miR-548ak KLHL28
PAR-CLIP [4]
hsa-miR-548ak KLF7
PAR-CLIP [4]
hsa-miR-548ak HPRT1
PAR-CLIP [4]
hsa-miR-548ak HOXA13
PAR-CLIP [4]
hsa-miR-548ak GPR27
PAR-CLIP [2] [4]
hsa-miR-548ak ENPP5
PAR-CLIP [4]
hsa-miR-548ak ATP5G3
PAR-CLIP [4]
hsa-miR-548ak ZWINT
PAR-CLIP [2]
hsa-miR-548ak ZBTB43
PAR-CLIP [2]
hsa-miR-548ak MSANTD4
PAR-CLIP [2]
hsa-miR-548ak MFSD9
PAR-CLIP [2]
hsa-miR-548ak TNIP2
PAR-CLIP [2]
hsa-miR-548ak BBS10
PAR-CLIP [2]
hsa-miR-548ak KIF3A
PAR-CLIP [2]
hsa-miR-548ak KIAA1586
PAR-CLIP [2]
hsa-miR-548ak NHS
PAR-CLIP [2]
hsa-miR-548ak RCC2
PAR-CLIP [2]
hsa-miR-548ak PLAGL2
PAR-CLIP [2]
hsa-miR-548ak HSP90AA1
PAR-CLIP [2]
hsa-miR-548ak CCDC80
PAR-CLIP [2]
hsa-miR-548ak VDAC2
PAR-CLIP [2]
hsa-miR-548ak ZNF724
PAR-CLIP [2]
hsa-miR-548ak KHSRP
PAR-CLIP [2]
hsa-miR-548ak SMIM15
HITS-CLIP [11] [12] [13]
hsa-miR-548ak EBNA1BP2
HITS-CLIP [11]
hsa-miR-548ak PRKG2
HITS-CLIP [11]
hsa-miR-548ak PLEKHG7
HITS-CLIP [11]
hsa-miR-548ak KDM5A
HITS-CLIP [11]
hsa-miR-548ak CTCFL
HITS-CLIP [11]
hsa-miR-548ak LYRM2
HITS-CLIP [11]
hsa-miR-548ak CLDN16
HITS-CLIP [11]
hsa-miR-548ak MTHFD1
HITS-CLIP [10]
hsa-miR-548ak SLC43A3
HITS-CLIP [8]
hsa-miR-548ak MKI67
HITS-CLIP [8]
hsa-miR-548ak AQP3
HITS-CLIP [8]
hsa-miR-548ak PCGF5
HITS-CLIP [8]
hsa-miR-548ak RYBP
HITS-CLIP [14]
hsa-miR-548ak ZBTB37
HITS-CLIP [14]
hsa-miR-548ak SETD7
HITS-CLIP [14]
hsa-miR-548ak SDAD1
HITS-CLIP [14]

References

authors journal year Pubmed link title
1 Memczak et al. Nature 2013 23446348 Circular RNAs are a large class of animal RNAs with regulatory potency.
2 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
3 Lipchina et al. Genes Dev. 2011 22012620 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
4 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
5 Gottwein et al. Cell Host Microbe 2011 22100165 Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines.
6 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
7 Farazi et al. Genome Biol. 2014 24398324 Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets.
8 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
9 Skalsky et al. PLoS Pathog. 2012 22291592 The viral and cellular microRNA targetome in lymphoblastoid cell lines.
10 Kishore et al. Genome Biol. 2013 23706177 Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing.
11 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
12 Haecker et al. PLoS Pathog. 2012 22927820 Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas.
13 Pillai et al. Breast Cancer Res. Treat. 2014 24906430 HITS-CLIP reveals key regulators of nuclear receptor signaling in breast cancer.
14 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
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