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hsa-miR-548aa (MIMAT0018447) (167 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-548aa ZNF587
CLASH [1]
hsa-miR-548aa ANP32E
PAR-CLIP [2]
hsa-miR-548aa ARIH1
PAR-CLIP [3] [2] [4]
hsa-miR-548aa PCGF2
HITS-CLIP [4]
PAR-CLIP [3] [2] [4]
hsa-miR-548aa TFAP2C
PAR-CLIP [4]
hsa-miR-548aa ETS2
PAR-CLIP [4]
hsa-miR-548aa KLHL15
PAR-CLIP [2]
hsa-miR-548aa AKAP11
HITS-CLIP [4]
PAR-CLIP [3] [2] [5] [6]
hsa-miR-548aa TXNIP
PAR-CLIP [3] [2] [7]
hsa-miR-548aa MIDN
PAR-CLIP [2]
hsa-miR-548aa ASH1L
HITS-CLIP [8]
hsa-miR-548aa NCL
PAR-CLIP [2]
hsa-miR-548aa ACTB
PAR-CLIP [4] [6]
hsa-miR-548aa EIF5AL1
PAR-CLIP [2] [4]
hsa-miR-548aa CDK5R1
PAR-CLIP [2] [4]
hsa-miR-548aa NWD1
PAR-CLIP [4]
hsa-miR-548aa ARF1
PAR-CLIP [2] [4]
hsa-miR-548aa RNF11
PAR-CLIP [3]
hsa-miR-548aa FEM1A
PAR-CLIP [4]
hsa-miR-548aa RREB1
PAR-CLIP [2]
hsa-miR-548aa ATP6V0B
PAR-CLIP [6]
hsa-miR-548aa CEBPG
PAR-CLIP [9] [10]
hsa-miR-548aa PLEKHA3
PAR-CLIP [4]
hsa-miR-548aa GRPEL2
PAR-CLIP [2]
hsa-miR-548aa PPP1CB
HITS-CLIP [11]
hsa-miR-548aa IGFBP5
PAR-CLIP [2]
hsa-miR-548aa LMOD3
PAR-CLIP [9]
hsa-miR-548aa ZC3H12C
PAR-CLIP [9]
hsa-miR-548aa ARL5B
PAR-CLIP [9]
hsa-miR-548aa HMX3
PAR-CLIP [9]
hsa-miR-548aa NR5A2
PAR-CLIP [9]
hsa-miR-548aa ZNF652
PAR-CLIP [9]
hsa-miR-548aa KCNB1
PAR-CLIP [9]
hsa-miR-548aa CCDC115
HITS-CLIP [4] [12] [13]
PAR-CLIP [6] [7] [3] [2] [4] [5]
hsa-miR-548aa PPP2R2B
PAR-CLIP [6]
hsa-miR-548aa CITED2
PAR-CLIP [6]
hsa-miR-548aa DNALI1
PAR-CLIP [6]
hsa-miR-548aa ZNF385A
PAR-CLIP [4] [5] [6]
hsa-miR-548aa YPEL2
PAR-CLIP [6]
hsa-miR-548aa SFT2D2
PAR-CLIP [6]
hsa-miR-548aa POLR2D
PAR-CLIP [4] [6]
hsa-miR-548aa CTTN
PAR-CLIP [6]
hsa-miR-548aa C11orf57
PAR-CLIP [6]
hsa-miR-548aa INHBA
HITS-CLIP [4]
PAR-CLIP [7] [3] [2] [4] [5] [6]
hsa-miR-548aa HMGN2
PAR-CLIP [6]
hsa-miR-548aa SLC38A9
PAR-CLIP [6]
hsa-miR-548aa ANKEF1
HITS-CLIP [4] [12] [14]
PAR-CLIP [7] [3] [2] [4] [5] [6]
hsa-miR-548aa YWHAZ
PAR-CLIP [6]
hsa-miR-548aa CEP120
PAR-CLIP [6]
hsa-miR-548aa TRIM24
PAR-CLIP [15]
hsa-miR-548aa CDK1
PAR-CLIP [10]
hsa-miR-548aa TMEM237
PAR-CLIP [10]
hsa-miR-548aa ZNF460
PAR-CLIP [10]
hsa-miR-548aa CHD4
PAR-CLIP [4] [5] [7] [3] [2]
hsa-miR-548aa FBXL13
PAR-CLIP [3] [5]
hsa-miR-548aa PPP2R2A
PAR-CLIP [3]
hsa-miR-548aa MIER3
PAR-CLIP [3] [4]
hsa-miR-548aa MAT2A
PAR-CLIP [3] [2]
hsa-miR-548aa KIF23
PAR-CLIP [2] [4] [3]
hsa-miR-548aa RPP14
HITS-CLIP [4]
PAR-CLIP [3]
hsa-miR-548aa ZNF354B
HITS-CLIP [12]
PAR-CLIP [3] [2] [4] [5]
hsa-miR-548aa MBNL3
PAR-CLIP [2] [4] [3]
hsa-miR-548aa COX6B1
PAR-CLIP [3]
hsa-miR-548aa ID4
PAR-CLIP [3] [2] [5]
hsa-miR-548aa XRCC3
HITS-CLIP [4]
PAR-CLIP [3] [4]
hsa-miR-548aa AJAP1
HITS-CLIP [14]
PAR-CLIP [3]
hsa-miR-548aa PNISR
HITS-CLIP [4]
PAR-CLIP [3]
hsa-miR-548aa SYNM
PAR-CLIP [5]
hsa-miR-548aa ARHGAP15
PAR-CLIP [5]
hsa-miR-548aa FBLN2
PAR-CLIP [5]
hsa-miR-548aa COL4A3
PAR-CLIP [5]
hsa-miR-548aa CD300E
PAR-CLIP [5]
hsa-miR-548aa TBC1D22B
PAR-CLIP [5]
hsa-miR-548aa EXOC8
PAR-CLIP [5]
hsa-miR-548aa PDE5A
PAR-CLIP [5]
hsa-miR-548aa TRPV2
PAR-CLIP [5]
hsa-miR-548aa SMTN
PAR-CLIP [5]
hsa-miR-548aa ZNF431
PAR-CLIP [5]
hsa-miR-548aa GPR85
PAR-CLIP [5]
hsa-miR-548aa KDR
PAR-CLIP [5]
hsa-miR-548aa KLF2
HITS-CLIP [8]
PAR-CLIP [5]
hsa-miR-548aa CBX7
PAR-CLIP [5]
hsa-miR-548aa TMX3
PAR-CLIP [5]
hsa-miR-548aa RAB33B
PAR-CLIP [5]
hsa-miR-548aa PSD3
PAR-CLIP [5]
hsa-miR-548aa ITPKB
PAR-CLIP [5]
hsa-miR-548aa HNRNPD
PAR-CLIP [5]
hsa-miR-548aa CABLES1
PAR-CLIP [5]
hsa-miR-548aa ANGEL2
PAR-CLIP [5]
hsa-miR-548aa SHISA9
PAR-CLIP [4]
hsa-miR-548aa BUB1
PAR-CLIP [4]
hsa-miR-548aa OPHN1
PAR-CLIP [4]
hsa-miR-548aa PITPNC1
PAR-CLIP [4]
hsa-miR-548aa CDC27
PAR-CLIP [4]
hsa-miR-548aa HSBP1
PAR-CLIP [4]
hsa-miR-548aa EIF5A
PAR-CLIP [4] [2]
hsa-miR-548aa MFF
PAR-CLIP [2] [4]
hsa-miR-548aa TSPAN3
PAR-CLIP [4]
hsa-miR-548aa TNRC6C
PAR-CLIP [4]
hsa-miR-548aa TAF13
PAR-CLIP [4]
hsa-miR-548aa ROBO1
PAR-CLIP [4]
hsa-miR-548aa PURB
PAR-CLIP [4]
hsa-miR-548aa HNRNPA1
PAR-CLIP [4]
hsa-miR-548aa GAL3ST3
PAR-CLIP [2]
hsa-miR-548aa SON
PAR-CLIP [2]
hsa-miR-548aa PRELID3B
PAR-CLIP [2]
hsa-miR-548aa ZNF678
PAR-CLIP [2]
hsa-miR-548aa SIX4
PAR-CLIP [2]
hsa-miR-548aa CELF2
PAR-CLIP [2]
hsa-miR-548aa MYBL1
PAR-CLIP [2]
hsa-miR-548aa CADM2
PAR-CLIP [2]
hsa-miR-548aa THYN1
PAR-CLIP [2]
hsa-miR-548aa CDKN2AIP
PAR-CLIP [2]
hsa-miR-548aa PHF19
PAR-CLIP [2]
hsa-miR-548aa DKK3
PAR-CLIP [2]
hsa-miR-548aa SLC24A4
HITS-CLIP [8]
PAR-CLIP [2]
hsa-miR-548aa PIWIL2
HITS-CLIP [16]
hsa-miR-548aa NKTR
HITS-CLIP [14] [8] [16]
hsa-miR-548aa FAM49A
HITS-CLIP [8]
hsa-miR-548aa EDIL3
HITS-CLIP [8]
hsa-miR-548aa TRA2B
HITS-CLIP [8]
hsa-miR-548aa PTPN11
HITS-CLIP [8]
hsa-miR-548aa SALL1
HITS-CLIP [8]
hsa-miR-548aa CDK12
HITS-CLIP [8]
hsa-miR-548aa ZNF665
HITS-CLIP [14] [8]
hsa-miR-548aa AP3B1
HITS-CLIP [8]
hsa-miR-548aa RAP2B
HITS-CLIP [11] [8]
hsa-miR-548aa ADAT2
HITS-CLIP [8]
hsa-miR-548aa PLEKHG7
HITS-CLIP [14] [8]
hsa-miR-548aa SLC30A3
HITS-CLIP [8]
hsa-miR-548aa NOP53
HITS-CLIP [8]
hsa-miR-548aa SERBP1
HITS-CLIP [8]
hsa-miR-548aa RNF115
HITS-CLIP [8]
hsa-miR-548aa CTNNA3
HITS-CLIP [8]
hsa-miR-548aa NOL9
HITS-CLIP [11] [8]
hsa-miR-548aa ZNF639
HITS-CLIP [8]
hsa-miR-548aa PCK1
HITS-CLIP [8]
hsa-miR-548aa MYOZ3
HITS-CLIP [8]
hsa-miR-548aa ZCCHC9
HITS-CLIP [8]
hsa-miR-548aa ZNF518B
HITS-CLIP [8] [11]
hsa-miR-548aa ZADH2
HITS-CLIP [8]
hsa-miR-548aa XKR4
HITS-CLIP [8]
hsa-miR-548aa SLC30A4
HITS-CLIP [8]
hsa-miR-548aa SLC30A1
HITS-CLIP [8]
hsa-miR-548aa POU2F1
HITS-CLIP [8]
hsa-miR-548aa MAP3K9
HITS-CLIP [8]
hsa-miR-548aa GABRA4
HITS-CLIP [8]
hsa-miR-548aa FZD10
HITS-CLIP [8]
hsa-miR-548aa BTBD3
HITS-CLIP [8]
hsa-miR-548aa MAGEF1
HITS-CLIP [8]
hsa-miR-548aa TGIF2
HITS-CLIP [8]
hsa-miR-548aa CEP128
HITS-CLIP [8]
hsa-miR-548aa AAGAB
HITS-CLIP [8]
hsa-miR-548aa SNX2
HITS-CLIP [14] [4]
hsa-miR-548aa SOD2
HITS-CLIP [14]
hsa-miR-548aa GLRX2
HITS-CLIP [14] [4]
hsa-miR-548aa BCAR1
HITS-CLIP [14]
hsa-miR-548aa GID4
HITS-CLIP [14]
hsa-miR-548aa DYRK2
HITS-CLIP [14]
hsa-miR-548aa CDC6
HITS-CLIP [4]
hsa-miR-548aa GK5
HITS-CLIP [4]
hsa-miR-548aa KLHL30
HITS-CLIP [11]
hsa-miR-548aa RWDD2A
HITS-CLIP [11]
hsa-miR-548aa POU6F2
HITS-CLIP [11]
hsa-miR-548aa TMTC1
HITS-CLIP [11]
hsa-miR-548aa TADA3
HITS-CLIP [11]
hsa-miR-548aa NCKAP1
HITS-CLIP [11]

References

authors journal year Pubmed link title
1 Helwak et al. Cell 2013 23622248 Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding.
2 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
3 Memczak et al. Nature 2013 23446348 Circular RNAs are a large class of animal RNAs with regulatory potency.
4 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
5 Lipchina et al. Genes Dev. 2011 22012620 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
6 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
7 Farazi et al. Genome Biol. 2014 24398324 Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets.
8 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
9 Gottwein et al. Cell Host Microbe 2011 22100165 Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines.
10 Skalsky et al. PLoS Pathog. 2012 22291592 The viral and cellular microRNA targetome in lymphoblastoid cell lines.
11 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
12 Kishore et al. Genome Biol. 2013 23706177 Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing.
13 Haecker et al. PLoS Pathog. 2012 22927820 Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas.
14 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
15 Majoros et al. Nat. Methods 2013 23708386 MicroRNA target site identification by integrating sequence and binding information.
16 Pillai et al. Breast Cancer Res. Treat. 2014 24906430 HITS-CLIP reveals key regulators of nuclear receptor signaling in breast cancer.
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