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hsa-miR-550b-3p (MIMAT0018445) (39 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-550b-3p SELENOF
PAR-CLIP [1]
hsa-miR-550b-3p EIF1AX
PAR-CLIP [2] [3] [4] [5]
hsa-miR-550b-3p ZNFX1
PAR-CLIP [5]
hsa-miR-550b-3p XBP1P1
PAR-CLIP [6]
hsa-miR-550b-3p MTRNR2L10
HITS-CLIP [7] [8]
PAR-CLIP [9] [2] [3]
hsa-miR-550b-3p MTRNR2L3
PAR-CLIP [2] [3] [4] [10] [9]
hsa-miR-550b-3p PARD6B
PAR-CLIP [9]
hsa-miR-550b-3p ZNF732
HITS-CLIP [8]
PAR-CLIP [4] [2] [3]
hsa-miR-550b-3p CEBPG
PAR-CLIP [2]
hsa-miR-550b-3p MAP10
PAR-CLIP [10]
hsa-miR-550b-3p EPHX4
HITS-CLIP [11]
PAR-CLIP [10]
hsa-miR-550b-3p PNN
PAR-CLIP [4]
hsa-miR-550b-3p ZNF410
PAR-CLIP [4]
hsa-miR-550b-3p BARHL2
HITS-CLIP [11]
hsa-miR-550b-3p ARNT
HITS-CLIP [11]
hsa-miR-550b-3p RC3H1
HITS-CLIP [11]
hsa-miR-550b-3p NLGN4X
HITS-CLIP [11]
hsa-miR-550b-3p RAPGEF1
HITS-CLIP [11]
hsa-miR-550b-3p YY2
HITS-CLIP [11]
hsa-miR-550b-3p CDK9
HITS-CLIP [11]
hsa-miR-550b-3p GRAP2
HITS-CLIP [11]
hsa-miR-550b-3p INMT
HITS-CLIP [11]
hsa-miR-550b-3p TNFSF15
HITS-CLIP [11]
hsa-miR-550b-3p SLC35B3
HITS-CLIP [11]
hsa-miR-550b-3p PPM1L
HITS-CLIP [11]
hsa-miR-550b-3p IKZF5
HITS-CLIP [11]
hsa-miR-550b-3p FAM13B
HITS-CLIP [11]
hsa-miR-550b-3p DDHD1
HITS-CLIP [11]
hsa-miR-550b-3p MTAP
HITS-CLIP [11]
hsa-miR-550b-3p ACTR1A
HITS-CLIP [11]
hsa-miR-550b-3p PXMP4
HITS-CLIP [11]
hsa-miR-550b-3p SLC35F6
HITS-CLIP [11]
hsa-miR-550b-3p KIAA1143
HITS-CLIP [8]
hsa-miR-550b-3p DIP2A
HITS-CLIP [12]
hsa-miR-550b-3p BMPR2
HITS-CLIP [12]
hsa-miR-550b-3p URM1
HITS-CLIP [12]
hsa-miR-550b-3p TUBD1
HITS-CLIP [12]
hsa-miR-550b-3p RBM8A
HITS-CLIP [12]
hsa-miR-550b-3p ABCF2
HITS-CLIP [12]

References

authors journal year Pubmed link title
1 Gottwein et al. Cell Host Microbe 2011 22100165 Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines.
2 Memczak et al. Nature 2013 23446348 Circular RNAs are a large class of animal RNAs with regulatory potency.
3 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
4 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
5 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
6 Skalsky et al. PLoS Pathog. 2012 22291592 The viral and cellular microRNA targetome in lymphoblastoid cell lines.
7 Haecker et al. PLoS Pathog. 2012 22927820 Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas.
8 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
9 Farazi et al. Genome Biol. 2014 24398324 Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets.
10 Lipchina et al. Genes Dev. 2011 22012620 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
11 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
12 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
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