| miRNA | gene name | experiments | ||||||
|---|---|---|---|---|---|---|---|---|
| hsa-miR-3154 | UTP14C |
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| hsa-miR-3154 | PRR3 |
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| hsa-miR-3154 | OGT |
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| hsa-miR-3154 | SKI |
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| hsa-miR-3154 | KIF2C |
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| hsa-miR-3154 | TNFAIP1 |
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| hsa-miR-3154 | RAD23B |
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| hsa-miR-3154 | UBE2V2 |
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| hsa-miR-3154 | TMEM104 |
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| hsa-miR-3154 | ANKRD33B |
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| hsa-miR-3154 | HOXA9 |
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| hsa-miR-3154 | ZNF264 |
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| hsa-miR-3154 | EIF4A1 |
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| hsa-miR-3154 | ZNF507 |
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| hsa-miR-3154 | HMGXB4 |
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| hsa-miR-3154 | G3BP1 |
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| hsa-miR-3154 | SPATS2 |
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| hsa-miR-3154 | TRIR |
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| hsa-miR-3154 | USP36 |
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| hsa-miR-3154 | CDCA3 |
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| hsa-miR-3154 | KIAA1456 |
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| hsa-miR-3154 | ZNF467 |
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| hsa-miR-3154 | ALKBH5 |
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| hsa-miR-3154 | FAM83H |
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| hsa-miR-3154 | TPM2 |
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| hsa-miR-3154 | KDM5C |
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| hsa-miR-3154 | PABPC1L2B |
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| hsa-miR-3154 | PABPC1L2A |
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| hsa-miR-3154 | C9orf78 |
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| hsa-miR-3154 | CYP4A22 |
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| hsa-miR-3154 | SAMD10 |
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| hsa-miR-3154 | MTHFSD |
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| hsa-miR-3154 | MKLN1 |
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| hsa-miR-3154 | ZNF34 |
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| hsa-miR-3154 | CYP4A11 |
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| hsa-miR-3154 | VPS37C |
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| hsa-miR-3154 | IDH3A |
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| hsa-miR-3154 | MRPS27 |
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| hsa-miR-3154 | METTL1 |
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| hsa-miR-3154 | MYL12A |
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| hsa-miR-3154 | ZFP91 |
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| hsa-miR-3154 | ZC3HAV1L |
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| hsa-miR-3154 | URM1 |
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| hsa-miR-3154 | UCK2 |
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| hsa-miR-3154 | UBE2G1 |
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| hsa-miR-3154 | TBL1XR1 |
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| hsa-miR-3154 | SLC2A14 |
|
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| hsa-miR-3154 | SCAMP5 |
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| hsa-miR-3154 | RNF121 |
|
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| hsa-miR-3154 | PDP2 |
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| hsa-miR-3154 | OTUB1 |
|
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| hsa-miR-3154 | MTUS1 |
|
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| hsa-miR-3154 | MDM4 |
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| hsa-miR-3154 | P3H1 |
|
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| hsa-miR-3154 | IFNLR1 |
|
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| hsa-miR-3154 | ICOSLG |
|
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| hsa-miR-3154 | ICK |
|
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| hsa-miR-3154 | CDC42SE1 |
|
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| hsa-miR-3154 | BTG2 |
|
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| hsa-miR-3154 | ARL10 |
|
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| hsa-miR-3154 | ANKRD11 |
|
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| hsa-miR-3154 | SUMO1 |
|
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| hsa-miR-3154 | SYT7 |
|
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| hsa-miR-3154 | HOXB8 |
|
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| hsa-miR-3154 | ERH |
|
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| hsa-miR-3154 | ZNF619 |
|
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| hsa-miR-3154 | C2orf82 |
|
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| hsa-miR-3154 | C20orf96 |
|
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| hsa-miR-3154 | NAT9 |
|
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| hsa-miR-3154 | OSBP |
|
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| hsa-miR-3154 | SEMA3F |
|
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| hsa-miR-3154 | CHAC1 |
|
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| hsa-miR-3154 | TERB2 |
|
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| hsa-miR-3154 | ZC3H11A |
|
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| hsa-miR-3154 | TSKU |
|
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| hsa-miR-3154 | ZNF460 |
|
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| hsa-miR-3154 | KLHL15 |
|
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| hsa-miR-3154 | GIGYF1 |
|
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| hsa-miR-3154 | NWD1 |
|
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| hsa-miR-3154 | CRCP |
|
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| hsa-miR-3154 | ZNF366 |
|
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| hsa-miR-3154 | TRMT10B |
|
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| hsa-miR-3154 | TMEM192 |
|
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| hsa-miR-3154 | POM121C |
|
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| hsa-miR-3154 | MAP7D1 |
|
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| hsa-miR-3154 | GGCX |
|
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| hsa-miR-3154 | SPA17 |
|
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| hsa-miR-3154 | CTNND1 |
|
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| hsa-miR-3154 | HADHB |
|
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| hsa-miR-3154 | TMEM119 |
|
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| hsa-miR-3154 | KMT2B |
|
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| hsa-miR-3154 | TSPYL1 |
|
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| hsa-miR-3154 | DCAF5 |
|
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| hsa-miR-3154 | ANKRD36 |
|
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| hsa-miR-3154 | USP22 |
|
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| hsa-miR-3154 | POTEM |
|
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| hsa-miR-3154 | POTEG |
|
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| hsa-miR-3154 | FAM129B |
|
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| hsa-miR-3154 | PRELP |
|
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| hsa-miR-3154 | SAMD14 |
|
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| hsa-miR-3154 | CPE |
|
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| hsa-miR-3154 | RABGEF1 |
|
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| hsa-miR-3154 | MT1A |
|
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| hsa-miR-3154 | FAM151B |
|
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| hsa-miR-3154 | OR7D2 |
|
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| hsa-miR-3154 | ZNF584 |
|
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| hsa-miR-3154 | SCARF1 |
|
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| hsa-miR-3154 | PPP1R10 |
|
||||||
| hsa-miR-3154 | NR4A3 |
|
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| hsa-miR-3154 | MIER3 |
|
||||||
| hsa-miR-3154 | DBR1 |
|
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| hsa-miR-3154 | ENAH |
|
| authors | journal | year | Pubmed link | title | |
|---|---|---|---|---|---|
| 1 | Kishore et al. | Nat. Methods | 2011 | 21572407 | A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins. |
| 2 | Hafner et al. | Cell | 2010 | 20371350 | Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP. |
| 3 | Memczak et al. | Nature | 2013 | 23446348 | Circular RNAs are a large class of animal RNAs with regulatory potency. |
| 4 | Whisnant et al. | MBio | 2013 | 23592263 | In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms. |
| 5 | Gottwein et al. | Cell Host Microbe | 2011 | 22100165 | Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines. |
| 6 | Lipchina et al. | Genes Dev. | 2011 | 22012620 | Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response. |
| 7 | Karginov et al. | Genes Dev. | 2013 | 23824327 | Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates. |
| 8 | Kishore et al. | Genome Biol. | 2013 | 23706177 | Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing. |
| 9 | Farazi et al. | Genome Biol. | 2014 | 24398324 | Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets. |
| 10 | Xue et al. | Cell | 2013 | 23313552 | Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits. |
| 11 | Chi et al. | Nature | 2009 | 19536157 | Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps. |