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hsa-miR-196b-5p (MIMAT0001080) (139 targets) in miRTarBase

miRNA gene name experiments
hsa-miR-196b-5p HOXB8
Luciferase reporter assay [1]
CLASH [2]
hsa-miR-196b-5p HOXC8
qRT-PCR [3]
Luciferase reporter assay [3]
Immunohistochemistry [3]
PAR-CLIP [4] [5] [6]
CLASH [2]
hsa-miR-196b-5p BCL2
Immunocytochemistry [7]
hsa-miR-196b-5p CD8A
Luciferase reporter assay [8]
hsa-miR-196b-5p HSD17B10
CLASH [2]
hsa-miR-196b-5p ATF4
CLASH [2]
hsa-miR-196b-5p MAPRE1
CLASH [2]
hsa-miR-196b-5p MRPS35
CLASH [2]
hsa-miR-196b-5p MEPCE
CLASH [2]
hsa-miR-196b-5p COX3
CLASH [2]
hsa-miR-196b-5p PRKACA
CLASH [2]
hsa-miR-196b-5p PAXBP1
CLASH [2]
hsa-miR-196b-5p PALD1
CLASH [2]
hsa-miR-196b-5p GPS1
CLASH [2]
hsa-miR-196b-5p CHD2
CLASH [2]
hsa-miR-196b-5p SLC6A15
CLASH [2]
hsa-miR-196b-5p PDE12
CLASH [2]
hsa-miR-196b-5p SLC23A2
CLASH [2]
hsa-miR-196b-5p TXNDC5
CLASH [2]
hsa-miR-196b-5p BEST3
CLASH [2]
hsa-miR-196b-5p ATP6
CLASH [2]
hsa-miR-196b-5p ALDOA
CLASH [2]
hsa-miR-196b-5p HTR1D
CLASH [2]
hsa-miR-196b-5p RTF1
CLASH [2]
hsa-miR-196b-5p CKB
CLASH [2]
hsa-miR-196b-5p MAT2A
CLASH [2]
hsa-miR-196b-5p TRA2A
CLASH [2]
hsa-miR-196b-5p NSD3
CLASH [2]
hsa-miR-196b-5p CDK5R1
CLASH [2]
hsa-miR-196b-5p MRPS26
CLASH [2]
hsa-miR-196b-5p AJUBA
CLASH [2]
hsa-miR-196b-5p KMT2D
CLASH [2]
hsa-miR-196b-5p REEP5
CLASH [2]
hsa-miR-196b-5p LAMB2
CLASH [2]
hsa-miR-196b-5p ND5
CLASH [2]
hsa-miR-196b-5p TXLNA
CLASH [2]
hsa-miR-196b-5p TUBB
CLASH [2]
hsa-miR-196b-5p RACK1
CLASH [2]
hsa-miR-196b-5p MFHAS1
CLASH [2]
hsa-miR-196b-5p LHX2
CLASH [2]
hsa-miR-196b-5p BCAR3
CLASH [2]
hsa-miR-196b-5p BUB1
CLASH [2]
hsa-miR-196b-5p MSH6
CLASH [2]
hsa-miR-196b-5p HERC2
CLASH [2]
hsa-miR-196b-5p IARS
CLASH [2]
hsa-miR-196b-5p CACNB3
CLASH [2]
hsa-miR-196b-5p RRP1B
CLASH [2]
hsa-miR-196b-5p TLE3
CLASH [2]
hsa-miR-196b-5p SNX9
CLASH [2]
hsa-miR-196b-5p HOXA9
qRT-PCR [9]
microarray [9]
ChIP [10]
Western blot [9]
Luciferase reporter assay [9] [11]
PAR-CLIP [12] [5]
hsa-miR-196b-5p MEIS1
qRT-PCR [9]
microarray [9]
Western blot [9]
Luciferase reporter assay [9]
Immunohistochemistry [9]
hsa-miR-196b-5p FAS
qRT-PCR [9]
microarray [9]
Western blot [9]
Luciferase reporter assay [9]
Immunohistochemistry [9]
hsa-miR-196b-5p ETS2
qRT-PCR [13]
ChIP [13]
Western blot [13]
Luciferase reporter assay [13]
hsa-miR-196b-5p HOXA10
qRT-PCR [14]
microarray [14]
Immunohistochemistry [14]
hsa-miR-196b-5p RDX
qRT-PCR [15]
Western blot [15]
Luciferase reporter assay [15]
Immunohistochemistry [15]
PAR-CLIP [4] [5]
hsa-miR-196b-5p ARID5B
PAR-CLIP [16]
hsa-miR-196b-5p LCOR
PAR-CLIP [12] [5]
hsa-miR-196b-5p SRP9
PAR-CLIP [12] [16]
hsa-miR-196b-5p HMGA2
HITS-CLIP [5]
PAR-CLIP [4] [12]
hsa-miR-196b-5p SMCR8
PAR-CLIP [5] [17] [4]
hsa-miR-196b-5p ZCCHC3
PAR-CLIP [4]
hsa-miR-196b-5p BACH1
PAR-CLIP [12]
hsa-miR-196b-5p GRPEL2
PAR-CLIP [4] [12] [5] [16] [17]
hsa-miR-196b-5p SRRT
PAR-CLIP [5] [17] [4] [12]
hsa-miR-196b-5p HMGA1
HITS-CLIP [18]
PAR-CLIP [16]
hsa-miR-196b-5p SUOX
PAR-CLIP [5]
hsa-miR-196b-5p CALM1
PAR-CLIP [5]
hsa-miR-196b-5p SP100
PAR-CLIP [16]
hsa-miR-196b-5p SLC30A6
HITS-CLIP [18]
hsa-miR-196b-5p ACVR2B
PAR-CLIP [5]
hsa-miR-196b-5p YIPF6
PAR-CLIP [5]
hsa-miR-196b-5p TBRG1
PAR-CLIP [16]
hsa-miR-196b-5p CALM3
PAR-CLIP [16]
hsa-miR-196b-5p KCNJ2
PAR-CLIP [5]
hsa-miR-196b-5p SALL3
PAR-CLIP [5]
hsa-miR-196b-5p CDV3
PAR-CLIP [5]
hsa-miR-196b-5p C11orf57
PAR-CLIP [5] [16]
hsa-miR-196b-5p PBX1
ChIP [10]
hsa-miR-196b-5p ACER2
PAR-CLIP [17]
hsa-miR-196b-5p RTL8C
PAR-CLIP [12] [16]
hsa-miR-196b-5p ZNF609
PAR-CLIP [16]
hsa-miR-196b-5p ATP6V1F
PAR-CLIP [16] [17]
hsa-miR-196b-5p HOXB7
Luciferase reporter assay [19]
hsa-miR-196b-5p GFI1
ChIP [10]
hsa-miR-196b-5p MYC
TRAP [20]
hsa-miR-196b-5p KIF27
PAR-CLIP [21]
hsa-miR-196b-5p C14orf37
PAR-CLIP [21]
hsa-miR-196b-5p FMNL3
PAR-CLIP [21]
hsa-miR-196b-5p TSPAN3
PAR-CLIP [16]
hsa-miR-196b-5p PPP1R15B
PAR-CLIP [16]
hsa-miR-196b-5p POLR2D
PAR-CLIP [5] [16]
hsa-miR-196b-5p MTUS1
PAR-CLIP [4] [16] [17]
hsa-miR-196b-5p MIEF1
PAR-CLIP [12] [5] [16] [17]
hsa-miR-196b-5p MAP3K2
PAR-CLIP [16]
hsa-miR-196b-5p KLHDC8B
PAR-CLIP [16]
hsa-miR-196b-5p KCTD21
PAR-CLIP [16]
hsa-miR-196b-5p CDKN1B
PAR-CLIP [12] [16]
hsa-miR-196b-5p DCTN4
PAR-CLIP [16]
hsa-miR-196b-5p RGL2
PAR-CLIP [16]
hsa-miR-196b-5p RTL8A
PAR-CLIP [4] [16]
hsa-miR-196b-5p GGA3
PAR-CLIP [17]
hsa-miR-196b-5p SPTSSA
PAR-CLIP [17]
hsa-miR-196b-5p RAB11FIP4
PAR-CLIP [17]
hsa-miR-196b-5p GATA6
PAR-CLIP [4] [12] [5] [17]
hsa-miR-196b-5p NUP155
PAR-CLIP [4] [12] [5]
hsa-miR-196b-5p IGDCC4
PAR-CLIP [4] [12] [5]
hsa-miR-196b-5p E2F7
HITS-CLIP [5]
PAR-CLIP [12] [4]
hsa-miR-196b-5p HOXA5
PAR-CLIP [4]
hsa-miR-196b-5p YOD1
PAR-CLIP [4] [12] [5]
hsa-miR-196b-5p NAP1L1
HITS-CLIP [22]
PAR-CLIP [4]
hsa-miR-196b-5p FAM135A
PAR-CLIP [5]
hsa-miR-196b-5p HIST1H2BD
PAR-CLIP [5]
hsa-miR-196b-5p TGFBR3
PAR-CLIP [5]
hsa-miR-196b-5p SLC9A7
PAR-CLIP [5]
hsa-miR-196b-5p RCC2
PAR-CLIP [12] [5]
hsa-miR-196b-5p NXPE3
PAR-CLIP [5]
hsa-miR-196b-5p MBD4
PAR-CLIP [5]
hsa-miR-196b-5p LRIG3
PAR-CLIP [12] [5]
hsa-miR-196b-5p IGF2BP3
PAR-CLIP [12] [5]
hsa-miR-196b-5p ABHD2
PAR-CLIP [5]
hsa-miR-196b-5p ZNF850
PAR-CLIP [5]
hsa-miR-196b-5p MMS22L
PAR-CLIP [5]
hsa-miR-196b-5p MED10
PAR-CLIP [5]
hsa-miR-196b-5p TRPC3
PAR-CLIP [12] [5]
hsa-miR-196b-5p SLC35E2B
PAR-CLIP [5]
hsa-miR-196b-5p PRUNE2
PAR-CLIP [5]
hsa-miR-196b-5p PLEKHA3
PAR-CLIP [5]
hsa-miR-196b-5p MAPK1
PAR-CLIP [5]
hsa-miR-196b-5p HSPA4L
PAR-CLIP [5]
hsa-miR-196b-5p BRAP
PAR-CLIP [5]
hsa-miR-196b-5p DFFA
PAR-CLIP [12]
hsa-miR-196b-5p ZSWIM1
PAR-CLIP [12]
hsa-miR-196b-5p EXOC8
PAR-CLIP [12]
hsa-miR-196b-5p SLC35G1
PAR-CLIP [12]
hsa-miR-196b-5p FAM104A
PAR-CLIP [12]
hsa-miR-196b-5p GNL1
HITS-CLIP [23]
hsa-miR-196b-5p FMO4
HITS-CLIP [23]
hsa-miR-196b-5p SARAF
HITS-CLIP [18]
hsa-miR-196b-5p CTPS1
HITS-CLIP [18]

References

authors journal year Pubmed link title
1 Ohnishi et al. PLoS ONE 2008 18493311 Enhancement of allele discrimination by introduction of nucleotide mismatches into siRNA in allele-specific gene silencing by RNAi.
2 Helwak et al. Cell 2013 23622248 Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding.
3 Li et al. Cancer Res. 2010 20736365 Ratio of miR-196s to HOXC8 messenger RNA correlates with breast cancer cell migration and metastasis.
4 Memczak et al. Nature 2013 23446348 Circular RNAs are a large class of animal RNAs with regulatory potency.
5 Kishore et al. Nat. Methods 2011 21572407 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins.
6 Skalsky et al. PLoS Pathog. 2012 22291592 The viral and cellular microRNA targetome in lymphoblastoid cell lines.
7 Abe et al. Hum. Reprod. 2013 23293219 miR-196b targets c-myc and Bcl-2 expression, inhibits proliferation and induces apoptosis in endometriotic stromal cells.
8 Donate et al. PLoS ONE 2013 23359619 T cell post-transcriptional miRNA-mRNA interaction networks identify targets associated with susceptibility/resistance to collagen-induced arthritis.
9 Li et al. Nat Commun 2012 22353710 miR-196b directly targets both HOXA9/MEIS1 oncogenes and FAS tumour suppressor in MLL-rearranged leukaemia.
10 Velu et al. J. Clin. Invest. 2014 24334453 Therapeutic antagonists of microRNAs deplete leukemia-initiating cell activity.
11 Liu et al. PLoS ONE 2013 23894305 Low expression of miR-196b enhances the expression of BCR-ABL1 and HOXA9 oncogenes in chronic myeloid leukemogenesis.
12 Hafner et al. Cell 2010 20371350 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
13 Liao et al. Carcinogenesis 2012 22298639 Transcriptional regulation of miR-196b by ETS2 in gastric cancer cells.
14 Lim et al. World J. Gastroenterol. 2013 24222951 Overexpression of miR-196b and HOXA10 characterize a poor-prognosis gastric cancer subtype.
15 Tsai et al. Cancer Lett. 2014 24933454 MicroRNA-196a/-196b promote cell metastasis via negative regulation of radixin in human gastric cancer.
16 Whisnant et al. MBio 2013 23592263 In-depth analysis of the interaction of HIV-1 with cellular microRNA biogenesis and effector mechanisms.
17 Farazi et al. Genome Biol. 2014 24398324 Identification of distinct miRNA target regulation between breast cancer molecular subtypes using AGO2-PAR-CLIP and patient datasets.
18 Xue et al. Cell 2013 23313552 Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits.
19 How et al. PLoS ONE 2013 23861821 MicroRNA-196b regulates the homeobox B7-vascular endothelial growth factor axis in cervical cancer.
20 Braun et al. Nucleic Acids Res. 2014 24510096 Rapid identification of regulatory microRNAs by miTRAP (miRNA trapping by RNA in vitro affinity purification).
21 Gottwein et al. Cell Host Microbe 2011 22100165 Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines.
22 Chi et al. Nature 2009 19536157 Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps.
23 Karginov et al. Genes Dev. 2013 23824327 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
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