miRNA miRBase

mmu-miR-540-3p (MIMAT0003167)

Accession MIMAT0003167
Name mmu-miR-540-3p
similar to following miRCarta miRNAs m-25194
Organism Mus musculus
Genome GRCm38.p5
Sequence (5' -> 3')
(20 nts)
AGGUCAGAGGUCGAUCCUGG
Located in precursor mmu-mir-540 (MI0003518)
chr12:109,586,122-109,586,141 (+)
MFE -2.00 kcal/mol
first miRBase version 8.0
last miRBase version 21.0
Experiments
experiment Pubmed link
Illumina 20215419
cloned 17604727 16274478
miRAP 16973894

Targets integrated in miRCarta

experimental
miRTarBase v6.1 11
predicted
microT-CDS v5.0 (score ≥ 0.7) 269
TargetScan v7.1 11

External tools

Links miRNA pathway dictionary (miRPathDB)
miRTargetLink Human
Tissue Atlas
miR2Disease
Experimentally supported targets TarBase
miRTarBase
Predicted targets MicroT-CDS