Precursor miRCarta

ssc-542.1

Accession ssc-542.1
similar to following miRBase precursors ssc-mir-18b (MI0017985)
Organism Sus scrofa
Genome Sscrofa11.1
Location ChrX:110,114,224-110,114,296 (-)
miRNA m-542
Sequence (5' -> 3')
(73 nts)
UAAGGUGCAUCUAGUGCAGUUAGUGAAGCAGCUUAGAAUCUACUGCCCUAAAUGCCCCUUCUGGCACAGGCUG
MFE -18.80 kcal/mol
first miRCarta version 1.0
last miRCarta version 1.1
Clusters (10 kb)
(7 precursors)
ssc-178.1
ssc-178.2
ssc-11.1
ssc-121.1
ssc-34497.1
ssc-542.1
ssc-242.1

Predicted Structure

ec806896-e96b-429f-9a44-2b261c3e604e481351aa-4754-4794-9277-63d987ae0a4a481351aa-4754-4794-9277-63d987ae0a4acc92b5d5-4000-4a07-91bb-d56e46b788bdcc92b5d5-4000-4a07-91bb-d56e46b788bddc52e3a1-479e-4a17-9c16-903f639321fadc52e3a1-479e-4a17-9c16-903f639321fabaa630f9-a976-4c0c-9ba4-3610fdd5da23baa630f9-a976-4c0c-9ba4-3610fdd5da23b6e97766-76da-4949-a964-d5c984d0eb7bb6e97766-76da-4949-a964-d5c984d0eb7b3d6eede1-d644-4a41-9be3-93d12c995a023d6eede1-d644-4a41-9be3-93d12c995a023bcae3fb-14a2-4fa8-8aab-f308edcb4b2acc914cd2-aa6e-4dce-9bea-5cc1d792cefe87755125-db27-477d-a929-df5172b7c4713bcae3fb-14a2-4fa8-8aab-f308edcb4b2acc914cd2-aa6e-4dce-9bea-5cc1d792cefe5c2263db-bf77-4cf6-9837-2182d9e04d76cfc9daea-a39b-422d-8370-58d640c2c704cc914cd2-aa6e-4dce-9bea-5cc1d792cefe5c2263db-bf77-4cf6-9837-2182d9e04d763b0db235-0559-46fb-83d3-90b992765939be5b82f7-81d7-4e5a-969e-8ef4365a92915c2263db-bf77-4cf6-9837-2182d9e04d763b0db235-0559-46fb-83d3-90b9927659396a7dc213-70d0-477b-8ed1-7c14f07801d0ce6d8585-ffb5-45b5-bc1d-5b44648a62cc3b0db235-0559-46fb-83d3-90b9927659396a7dc213-70d0-477b-8ed1-7c14f07801d0953461cf-ba27-452a-ab98-e9e5649a9700fd54d86c-339f-4baf-b888-ac5b3b41962a6a7dc213-70d0-477b-8ed1-7c14f07801d0953461cf-ba27-452a-ab98-e9e5649a9700b807791a-d7ce-4441-b27e-49dd4e1939e42b9b5d0d-8e81-457d-8e37-8f6cf7a4c02b953461cf-ba27-452a-ab98-e9e5649a9700b807791a-d7ce-4441-b27e-49dd4e1939e4d9427a2c-ed69-4f3a-99a5-a4dd8b27650f1ec9b2f6-23c0-4847-baed-4aa1f5df00eab807791a-d7ce-4441-b27e-49dd4e1939e4d9427a2c-ed69-4f3a-99a5-a4dd8b27650f6b1182f6-8f1d-43fe-9c89-649e737cd5f93d82088e-eafe-42cc-bd59-5af2695d61a5d9427a2c-ed69-4f3a-99a5-a4dd8b27650f6b1182f6-8f1d-43fe-9c89-649e737cd5f998d69aa7-9309-4851-b2d6-93f6c7b4322960669853-f9fc-468a-b990-a3bbaf4654206b1182f6-8f1d-43fe-9c89-649e737cd5f998d69aa7-9309-4851-b2d6-93f6c7b43229f0715748-5424-404f-96ea-e7887c31306b4e833a85-4173-4f94-a2da-c69587f7d7be98d69aa7-9309-4851-b2d6-93f6c7b43229f0715748-5424-404f-96ea-e7887c31306bf0e4f57c-c665-45ba-a2ab-d3788ceb86056f8187a0-707b-492b-8c49-a94ab16e7abef0715748-5424-404f-96ea-e7887c31306bf0e4f57c-c665-45ba-a2ab-d3788ceb8605df41fdc1-a566-419b-b1c9-45cb3b39eadb9baa66e9-e73c-4789-9415-c34e76e2d5f8f0e4f57c-c665-45ba-a2ab-d3788ceb8605df41fdc1-a566-419b-b1c9-45cb3b39eadbdf41fdc1-a566-419b-b1c9-45cb3b39eadba3c6ecf0-52f1-4518-8391-e79a8460aff5d7efcd49-6a8f-4193-85ba-fb867267fd8f1513406b-d28c-446d-9322-4187e6972402a3c6ecf0-52f1-4518-8391-e79a8460aff5d7efcd49-6a8f-4193-85ba-fb867267fd8f4e603a7d-7ec7-42ec-b6eb-c2a64cc44e08a6a549ed-3bdb-4aca-a866-fc2cc45d61aed7efcd49-6a8f-4193-85ba-fb867267fd8f4e603a7d-7ec7-42ec-b6eb-c2a64cc44e08450343ce-38f8-45d7-a17f-eac8f9ffcb225115cf4c-dda4-41f6-a993-73a1317b68b14e603a7d-7ec7-42ec-b6eb-c2a64cc44e08450343ce-38f8-45d7-a17f-eac8f9ffcb2278884c46-c13d-49bd-9079-c300dcb844c5d8449ea3-b67a-4409-b8a1-61b8d64829e8450343ce-38f8-45d7-a17f-eac8f9ffcb2278884c46-c13d-49bd-9079-c300dcb844c578884c46-c13d-49bd-9079-c300dcb844c51e0b4453-51c0-4d59-8027-b0810b297967c1de8643-76f6-446c-9ffb-2cebdd5faa5b6ad2edef-68dc-4a3d-8504-8fb5a00c476e1e0b4453-51c0-4d59-8027-b0810b297967c1de8643-76f6-446c-9ffb-2cebdd5faa5b832b4ab6-7df7-4395-a52e-f8817a8983920cc78f2a-c2f0-4172-a46e-d3301290614ec1de8643-76f6-446c-9ffb-2cebdd5faa5b832b4ab6-7df7-4395-a52e-f8817a898392af33f2eb-3add-422a-a615-019e7daecd1eaf41facd-0712-412f-bed0-291a41821665832b4ab6-7df7-4395-a52e-f8817a898392af33f2eb-3add-422a-a615-019e7daecd1eaf33f2eb-3add-422a-a615-019e7daecd1ea2afc35e-a0fa-428d-bbc3-a87db0fc7254b4f614a4-dd6f-428c-bfab-4beb2e27705a5b4b9b52-e1ed-49cd-ac56-0e4b0500eb61a2afc35e-a0fa-428d-bbc3-a87db0fc7254b4f614a4-dd6f-428c-bfab-4beb2e27705ab058264d-442c-4466-a5a8-365f1ed37a50043dfd85-b010-40ed-b36b-cdbece43f1e2b4f614a4-dd6f-428c-bfab-4beb2e27705ab058264d-442c-4466-a5a8-365f1ed37a504c23a8ac-d061-4106-89f0-04cc66d7ef06d6716cb7-2463-4625-929f-208461aec807b058264d-442c-4466-a5a8-365f1ed37a504c23a8ac-d061-4106-89f0-04cc66d7ef06a6ba9bbc-c8ba-4ad0-9b63-c70ec46583cd427e6d3e-b169-4589-a160-4cffaf0c19564c23a8ac-d061-4106-89f0-04cc66d7ef06a6ba9bbc-c8ba-4ad0-9b63-c70ec46583cd43a55d49-9349-4a6e-ad47-998c2a660bee982a0899-72b9-4466-9af2-a17bf88a3c71a6ba9bbc-c8ba-4ad0-9b63-c70ec46583cd43a55d49-9349-4a6e-ad47-998c2a660bee43a55d49-9349-4a6e-ad47-998c2a660bee3c84fdb5-2005-4c90-9a82-496e3704cb4d76fde3b2-bc02-41e5-8f9f-8e09ee389a034a55a5d8-cf02-418c-85ee-97f30a59de9b3c84fdb5-2005-4c90-9a82-496e3704cb4d76fde3b2-bc02-41e5-8f9f-8e09ee389a03108b6652-35a2-4a5f-abfe-8cea706e9089659f5600-50fb-4cfa-a7ea-bd98e951bf8d76fde3b2-bc02-41e5-8f9f-8e09ee389a03108b6652-35a2-4a5f-abfe-8cea706e9089108b6652-35a2-4a5f-abfe-8cea706e90891e603c07-ed2f-431e-a256-b72891f997001e603c07-ed2f-431e-a256-b72891f99700693170b3-edbc-4401-bc64-f75711c708b4693170b3-edbc-4401-bc64-f75711c708b40fb1f200-ac19-482e-a7d6-df3625a533220fb1f200-ac19-482e-a7d6-df3625a533224372d49c-237b-4897-8ad3-f7583e42989f4372d49c-237b-4897-8ad3-f7583e42989ff0a79f0e-7db5-4970-bd69-a7ff43ee40a0f0a79f0e-7db5-4970-bd69-a7ff43ee40a06e9c8edf-5130-4f28-bf93-f3e3473afd436e9c8edf-5130-4f28-bf93-f3e3473a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516fb5745c2263db-bf77-4cf6-9837-2182d9e04d76dfc5fc69-3b2c-4514-b1da-e91f9b8a7c2fdf41fdc1-a566-419b-b1c9-45cb3b39eadb50bcdef7-85e7-49d5-aa8a-8ecd564bfd0fa2afc35e-a0fa-428d-bbc3-a87db0fc725409b73db9-d67b-4f77-97cb-541739b1dc1c693170b3-edbc-4401-bc64-f75711c708b4a5af08dd-6d53-4630-ac53-b9d1455f635b10f4a05b-a482-4420-af05-b4cbffa9338f125ce177-e499-4115-bb8d-b36357dc1dae043dfd85-b010-40ed-b36b-cdbece43f1e2708adc8e-2731-4e35-a706-d73e36094d501513406b-d28c-446d-9322-4187e6972402f0c03a6c-cadb-4006-9438-cb90816a2c902b9b5d0d-8e81-457d-8e37-8f6cf7a4c02b0ffccc30-bccc-49f2-a235-796afd2d1840empty:1empty:1Aempty:1empty:2empty:2Uempty:2empty:3empty:3Gempty:3empty:4empty:4Uempty:4empty:5empty:5Gempty:5empty:6empty:6Uempty:6empty:7empty:7Cempty:7empty:8empty:8Uempty:8empty:9empty:9Cempty:9empty:10empty:10Uempty:10empty:11empty:11Uempty:11empty:12empty:12Gempty:12empty:13empty:13Uempty:13empty:14empty:14Gempty:14empty:15empty:15Uempty:15m-542empty:16Um-542m-542empty:17Am-542m-542empty:18Am-542m-542empty:19Gm-542m-542empty:20Gm-542m-542empty:21Um-542m-542empty:22Gm-542m-542empty:23Cm-542m-542empty:24Am-542m-542empty:25Um-542m-542empty:26Cm-542m-542empty:27Um-542m-542empty:28Am-542m-542empty:29Gm-542m-542empty:30Um-542m-542empty:31Gm-542m-542empty:32Cm-542m-542empty:33Am-542m-542empty:34Gm-542m-542empty:35Um-542empty:36empty:36Uempty:36empty:37empty:37Aempty:37empty:38empty:38Gempty:38empty:39empty:39Uempty:39empty:40empty:40Gempty:40empty:41empty:41Aempty:41empty:42empty:42Aempty:42empty:43empty:43Gempty:43empty:44empty:44Cempty:44empty:45empty:45Aempty:45empty:46empty:46Gempty:46empty:47empty:47Cempty:47empty:48empty:48Uempty:48empty:49empty:49Uempty:49empty:50empty:50Aempty:50empty:51empty:51Gempty:51empty:52empty:52Aempty:52empty:53empty:53Aempty:53empty:54empty:54Uempty:54empty:55empty:55Cempty:55empty:56empty:56Uempty:56empty:57empty:57Aempty:57empty:58empty:58Cempty:58empty:59empty:59Uempty:59empty:60empty:60Gempty:60empty:61empty:61Cempty:61empty:62empty:62Cempty:62empty:63empty:63Cempty:63empty:64empty:64Uempty:64empty:65empty:65Aempty:65empty:66empty:66Aempty:66empty:67empty:67Aempty:67empty:68empty:68Uempty:68empty:69empty:69Gempty:69empty:70empty:70Cempty:70empty:71empty:71Cempty:71empty:72empty:72Cempty:72empty:73empty:73Cempty:73empty:74empty:74Uempty:74empty:75empty:75Uempty:75empty:76empty:76Cempty:76empty:77empty:77Uempty:77empty:78empty:78Gempty:78empty:79empty:79Gempty:79empty:80empty:80Cempty:80empty:81empty:81Aempty:81empty:82empty:82Cempty:82empty:83empty:83Aempty:83empty:84empty:84Gempty:84empty:85empty:85Gempty:85empty:86empty:86Cempty:86empty:87empty:87Uempty:87empty:88empty:88Gempty:881020304050607080

Genomic context

GCF_000003025.6_Sscrofa11.1 ChrX:110,104,224-110,124,311110,106,000110,108,000110,110,000110,112,000110,114,000110,116,000110,118,000110,120,000110,122,000110,124,000
Gene legend:
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