Precursor miRCarta

cfa-54.1

Accession cfa-54.1
similar to following miRBase precursors cfa-mir-200c (MI0008070)
Organism Canis familiaris
Genome CanFam3.1
Location chr27:38,082,097-38,082,159 (-)
miRNA m-54
Sequence (5' -> 3')
(63 nts)
CGUCUUACCCAGCAGUGUUUGGGUGCUGGUUGGGAGUCUCUAAUACUGCCGGGUAAUGAUGGA
MFE -28.60 kcal/mol
first miRCarta version 1.0
last miRCarta version 1.1
Clusters (10 kb)
(2 precursors)
cfa-28861.1
cfa-54.1

Predicted Structure

83a10bdd-a6b3-40f3-8c7b-3978acb92ce873f030d6-8db2-4abd-bda6-8f83bb114e8fdedcdf40-5828-4a36-9186-b40ed523f55883a10bdd-a6b3-40f3-8c7b-3978acb92ce87cc3bbc3-64c4-4a3c-93de-34270366d4afc291764a-2347-42da-b5c3-25cabc213a6283a10bdd-a6b3-40f3-8c7b-3978acb92ce87cc3bbc3-64c4-4a3c-93de-34270366d4afd71dc325-8b86-46a2-8fd5-a08ea3cf4746e35aebe3-0040-42ca-b949-e691150458ed7cc3bbc3-64c4-4a3c-93de-34270366d4afd71dc325-8b86-46a2-8fd5-a08ea3cf4746ba41bb7c-cd4b-4efa-aa84-52f85c91e6477589eeb5-f884-4818-87d4-370f30709000d71dc325-8b86-46a2-8fd5-a08ea3cf4746ba41bb7c-cd4b-4efa-aa84-52f85c91e647088aef84-50f2-40f0-9d6c-1ad3267251f70bcc612c-f790-4310-bf91-9c49d974e476ba41bb7c-cd4b-4efa-aa84-52f85c91e647088aef84-50f2-40f0-9d6c-1ad3267251f7db0f37d2-d61a-40f8-a246-e246d3a74354fad49ee9-9b7d-4a91-971f-4b92bbcb0e0b088aef84-50f2-40f0-9d6c-1ad3267251f7db0f37d2-d61a-40f8-a246-e246d3a7435479965150-2745-4503-b3de-f61de1fdf5b78d7f7bfa-2036-464c-a046-53639c523a7cdb0f37d2-d61a-40f8-a246-e246d3a7435479965150-2745-4503-b3de-f61de1fdf5b7108ac17b-f72e-4052-9272-a568b006d9d945363c68-d40a-41b2-bf24-699bbfbf4cbb79965150-2745-4503-b3de-f61de1fdf5b7108ac17b-f72e-4052-9272-a568b006d9d9a552acdd-be0c-41cf-8a30-aaad570c0bb72889fde0-1261-452c-9e6b-c43d738a6fee108ac17b-f72e-4052-9272-a568b006d9d9a552acdd-be0c-41cf-8a30-aaad570c0bb7a552acdd-be0c-41cf-8a30-aaad570c0bb7392450ae-defa-46ae-b07f-c64cd0fa8d45069f2ae0-92bc-4c50-aed7-3d61f170b3f6c69d4b64-3c7c-4f8e-9ada-783f53a1a339392450ae-defa-46ae-b07f-c64cd0fa8d45069f2ae0-92bc-4c50-aed7-3d61f170b3f6599ba8c7-133b-4624-a280-36e5e6b444fefef7facb-d022-45ac-8379-8f8795eb1dd6069f2ae0-92bc-4c50-aed7-3d61f170b3f6599ba8c7-133b-4624-a280-36e5e6b444fe7cb3e5d9-5cb0-4d0a-80c8-b2472497748a19e4ce48-8986-43d9-8d00-3c64d87dec12599ba8c7-133b-4624-a280-36e5e6b444fe7cb3e5d9-5cb0-4d0a-80c8-b2472497748aa8ff8b98-63b0-48ba-a399-9c3d23a5c90fa87b874f-595c-4635-9690-19ebbe365afc7cb3e5d9-5cb0-4d0a-80c8-b2472497748aa8ff8b98-63b0-48ba-a399-9c3d23a5c90f4bb82c42-a15d-42b6-bb01-245fdfa749147b4db88c-dc19-442b-a518-e409e1b38514a8ff8b98-63b0-48ba-a399-9c3d23a5c90f4bb82c42-a15d-42b6-bb01-245fdfa74914cfbf3a6e-e7fc-4828-a7d3-582384118d938c9ec36b-2d03-4a88-ba4c-3d751cc17c3c4bb82c42-a15d-42b6-bb01-245fdfa74914cfbf3a6e-e7fc-4828-a7d3-582384118d9399b5059d-d89d-4861-a2f0-d33056264867180ec452-e53a-4e72-bf50-88f005da3ec6cfbf3a6e-e7fc-4828-a7d3-582384118d9399b5059d-d89d-4861-a2f0-d3305626486737fe700e-f316-4441-b77b-cd77ec82c5c2f6af0a75-12aa-4ff3-a357-bd42eb24b28c99b5059d-d89d-4861-a2f0-d3305626486737fe700e-f316-4441-b77b-cd77ec82c5c237fe700e-f316-4441-b77b-cd77ec82c5c23e0c4864-2dbb-40fb-bcc2-37065c9cb4e7126e599b-73b5-4c5b-ad96-cbcc59ca25bf17188fc6-37c9-4bae-9dac-be28a4f8fd063e0c4864-2dbb-40fb-bcc2-37065c9cb4e7126e599b-73b5-4c5b-ad96-cbcc59ca25bf7ac3834c-a576-4620-822d-bc23ee4aea35be89a9a9-a338-4b18-99ca-43354d547c46126e599b-73b5-4c5b-ad96-cbcc59ca25bf7ac3834c-a576-4620-822d-bc23ee4aea35b638f292-8c20-4031-8471-f493aa9e4b40cb1b33a7-b077-4377-856a-706b76ce1c367ac3834c-a576-4620-822d-bc23ee4aea35b638f292-8c20-4031-8471-f493aa9e4b40b638f292-8c20-4031-8471-f493aa9e4b40d89a8252-c514-4118-ac6b-b7ca555719817707e0f1-183b-4ab6-b752-21ad905683eb98b2711d-181b-4c71-bb7e-8f2e7a5bdc2ad89a8252-c514-4118-ac6b-b7ca555719817707e0f1-183b-4ab6-b752-21ad905683eb705aa35c-f22e-4fca-bf94-a8fb7ce975152e10e330-fa10-461f-8577-2b694e68442e7707e0f1-183b-4ab6-b752-21ad905683eb705aa35c-f22e-4fca-bf94-a8fb7ce975156add3deb-9e7d-4e61-bce3-62e5a51ec5fff11cfcd4-d564-43b9-9a7c-41ee6de63e4f705aa35c-f22e-4fca-bf94-a8fb7ce975156add3deb-9e7d-4e61-bce3-62e5a51ec5ff6add3deb-9e7d-4e61-bce3-62e5a51ec5ff3799da28-0e42-41c5-80d2-977f351dcf713799da28-0e42-41c5-80d2-977f351dcf710f4d656f-97b0-47f5-aae5-da16a165e9900f4d656f-97b0-47f5-aae5-da16a165e9903af822ca-e191-4d91-bb67-d01b966d2c403af822ca-e191-4d91-bb67-d01b966d2c40bdc67f9c-d803-4558-906f-f0453749f88fbdc67f9c-d803-4558-906f-f0453749f88f42ec4623-662a-419e-863a-e36e65b1f8b942ec4623-662a-419e-863a-e36e65b1f8b96f31a156-d331-4e87-a4bd-ebd1743c34676f31a156-d331-4e87-a4bd-ebd1743c3467e603ad32-1325-44f9-9084-5aa8e4016ef9f11cfcd4-d564-43b9-9a7c-41ee6de63e4f6add3deb-9e7d-4e61-bce3-62e5a51ec5ffe603ad32-1325-44f9-9084-5aa8e4016ef9f11cfcd4-d564-43b9-9a7c-41ee6de63e4f2e10e330-fa10-461f-8577-2b694e68442e705aa35c-f22e-4fca-bf94-a8fb7ce97515f11cfcd4-d564-43b9-9a7c-41ee6de63e4f2e10e330-fa10-461f-8577-2b694e68442e98b2711d-181b-4c71-bb7e-8f2e7a5bdc2a7707e0f1-183b-4ab6-b752-21ad905683eb2e10e330-fa10-461f-8577-2b694e68442e98b2711d-181b-4c71-bb7e-8f2e7a5bdc2acb1b33a7-b077-4377-856a-706b76ce1c36b638f292-8c20-4031-8471-f493aa9e4b4098b2711d-181b-4c71-bb7e-8f2e7a5bdc2acb1b33a7-b077-4377-856a-706b76ce1c36be89a9a9-a338-4b18-99ca-43354d547c467ac3834c-a576-4620-822d-bc23ee4aea35cb1b33a7-b077-4377-856a-706b76ce1c36be89a9a9-a338-4b18-99ca-43354d547c4617188fc6-37c9-4bae-9dac-be28a4f8fd06126e599b-73b5-4c5b-ad96-cbcc59ca25bfbe89a9a9-a338-4b18-99ca-43354d547c4617188fc6-37c9-4bae-9dac-be28a4f8fd0617188fc6-37c9-4bae-9dac-be28a4f8fd068ca5db7b-bc74-462f-97a8-fbaa92cf65c8f6af0a75-12aa-4ff3-a357-bd42eb24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3e12ad5dd7360411-31c3-45a3-825e-9d2739a865d061df22e7-9786-477f-8bd2-f08be2b47efbempty:1empty:1Cempty:1empty:2empty:2Gempty:2empty:3empty:3Uempty:3empty:4empty:4Cempty:4empty:5empty:5Uempty:5empty:6empty:6Uempty:6empty:7empty:7Aempty:7empty:8empty:8Cempty:8empty:9empty:9Cempty:9empty:10empty:10Cempty:10empty:11empty:11Aempty:11empty:12empty:12Gempty:12empty:13empty:13Cempty:13empty:14empty:14Aempty:14empty:15empty:15Gempty:15empty:16empty:16Uempty:16empty:17empty:17Gempty:17empty:18empty:18Uempty:18empty:19empty:19Uempty:19empty:20empty:20Uempty:20empty:21empty:21Gempty:21empty:22empty:22Gempty:22empty:23empty:23Gempty:23empty:24empty:24Uempty:24empty:25empty:25Gempty:25empty:26empty:26Cempty:26empty:27empty:27Uempty:27empty:28empty:28Gempty:28empty:29empty:29Gempty:29empty:30empty:30Uempty:30empty:31empty:31Uempty:31empty:32empty:32Gempty:32empty:33empty:33Gempty:33empty:34empty:34Gempty:34empty:35empty:35Aempty:35empty:36empty:36Gempty:36empty:37empty:37Uempty:37empty:38empty:38Cempty:38empty:39empty:39Uempty:39empty:40empty:40Cempty:40m-54empty:41Um-54m-54empty:42Am-54m-54empty:43Am-54m-54empty:44Um-54m-54empty:45Am-54m-54empty:46Cm-54m-54empty:47Um-54m-54empty:48Gm-54m-54empty:49Cm-54m-54empty:50Cm-54m-54empty:51Gm-54m-54empty:52Gm-54m-54empty:53Gm-54m-54empty:54Um-54m-54empty:55Am-54m-54empty:56Am-54m-54empty:57Um-54m-54empty:58Gm-54m-54empty:59Am-54m-54empty:60Um-54m-54empty:61Gm-54m-54empty:62Gm-54m-54empty:63Am-54empty:64empty:64Gempty:64empty:65empty:65Gempty:65empty:66empty:66Cempty:66empty:67empty:67Cempty:67empty:68empty:68Cempty:68empty:69empty:69Cempty:69empty:70empty:70Uempty:70empty:71empty:71Gempty:71empty:72empty:72Cempty:72empty:73empty:73Cempty:73empty:74empty:74Cempty:74empty:75empty:75Cempty:75empty:76empty:76Uempty:76empty:77empty:77Gempty:77empty:78empty:78Uempty:7810203040506070

Genomic context

Gene legend:
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