Precursor miRCarta

hsa-22598-12680.1

Accession hsa-22598-12680.1
Organism Homo sapiens
Genome GRCh38.p10
Location 6:6,546,854-6,546,908 (-)
miRNA m-22598
miRNA m-12680
Sequence (5' -> 3')
(55 nts)
GUCUCACGCAGCGUCUGUCUGUGCAGUGCCCAGAUGGCAGGGGCUGUAGAGGCCU
MFE -23.90 kcal/mol
first miRCarta version 1.0
last miRCarta version 1.1
Clusters (10 kb)
(1 precursors)
hsa-22598-12680.1

Predicted Structure

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GGUGGCGAGCUCCAGGUCUCACGCAGCGUCUGUCUGUGCAGUGCCCAGAUGGCAGGGGCUGUAGAGGCCUCUAGAAACCUGCGGC050100150
RPMMone mismatchno mismatch
GGUGGCGAGCUCCAGGUCUCACGCAGCGUCUGUCUGUGCAGUGCCCAGAUGGCAGGGGCUGUAGAGGCCUCUAGAAACCUGCGGC0500
number of readsone mismatchno mismatch

Genomic context

GCF_000001405.36_GRCh38.p10 6:6,536,839-6,556,9236,538,0006,540,0006,542,0006,544,0006,546,0006,548,0006,550,0006,552,0006,554,0006,556,000<LY86-AS1<hsa-22598-12680.1
Gene legend:
lncRNA
miRCarta_miRNA

References

Authors Journal Year Pubmed link Title
1 Fehlmann et al. Bioinformatics 2018 29281000 A high-resolution map of the human small non-coding transcriptome.
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