Precursor miRCarta

hsa-13009-19053.1

Accession hsa-13009-19053.1
Organism Homo sapiens
Genome GRCh38.p10
Location 5:180,274,593-180,274,650 (-)
miRNA m-13009
miRNA m-19053
Sequence (5' -> 3')
(58 nts)
CUCACAGAUGGAGGUUCUGGAAGGGUAUCUGCUUCCAAGCUCCUUCAGCCUGUUGGCA
MFE -20.90 kcal/mol
first miRCarta version 1.0
last miRCarta version 1.1
Clusters (10 kb)
(1 precursors)
hsa-13009-19053.1

Predicted Structure

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CUGGGCUGGGCUCAGCUCACAGAUGGAGGUUCUGGAAGGGUAUCUGCUUCCAAGCUCCUUCAGCCUGUUGGCAGAGUCUAGUUCCUUA050
RPMMone mismatchno mismatch
CUGGGCUGGGCUCAGCUCACAGAUGGAGGUUCUGGAAGGGUAUCUGCUUCCAAGCUCCUUCAGCCUGUUGGCAGAGUCUAGUUCCUUA0100200300400
number of readsone mismatchno mismatch

Genomic context

GCF_000001405.36_GRCh38.p10 5:180,264,578-180,284,665180,266,000180,268,000180,270,000180,272,000180,274,000180,276,000180,278,000180,280,000180,282,000180,284,000<MAPK9<hsa-13009-19053.1
Gene legend:
protein coding
miRCarta_miRNA

References

Authors Journal Year Pubmed link Title
1 Fehlmann et al. Bioinformatics 2018 29281000 A high-resolution map of the human small non-coding transcriptome.
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