Precursor miRCarta

hsa-19873-14081.1

Accession hsa-19873-14081.1
Organism Homo sapiens
Genome GRCh38.p10
Location 20:49,034,139-49,034,203 (+)
miRNA m-19873
miRNA m-14081
Sequence (5' -> 3')
(65 nts)
CAGUUAGUGUCACUGCUUUGCACAGUCCCCAUUAAAGGACCCUCCAGAGAGGGACAGUAACUGUG
MFE -24.40 kcal/mol
first miRCarta version 1.0
last miRCarta version 1.1
Clusters (10 kb)
(1 precursors)
hsa-19873-14081.1

Predicted Structure

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AAGUGAGUGUACUGGCAGUUAGUGUCACUGCUUUGCACAGUCCCCAUUAAAGGACCCUCCAGAGAGGGACAGUAACUGUGCAUGAGAAGCCGCUC050100
RPMMone mismatchno mismatch
AAGUGAGUGUACUGGCAGUUAGUGUCACUGCUUUGCACAGUCCCCAUUAAAGGACCCUCCAGAGAGGGACAGUAACUGUGCAUGAGAAGCCGCUC0200400600
number of readsone mismatchno mismatch

Genomic context

GCF_000001405.36_GRCh38.p10 20:49,024,124-49,044,21849,026,00049,028,00049,030,00049,032,00049,034,00049,036,00049,038,00049,040,00049,042,00049,044,000ARFGEF2>hsa-19873-14081.1><SNAP23P<CSE1L-AS1
Gene legend:
protein coding
miRCarta_miRNA
pseudogene
lncRNA

References

Authors Journal Year Pubmed link Title
1 Fehlmann et al. Bioinformatics 2018 29281000 A high-resolution map of the human small non-coding transcriptome.
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