Precursor miRCarta

hsa-6542.1

Accession hsa-6542.1
Organism Homo sapiens
Genome GRCh38.p10
Location 8:28,301,345-28,301,410 (-)
miRNA m-6542
Sequence (5' -> 3')
(66 nts)
UGGCAUGGUUGGGAGCAAUUGUUACUUAACAGUUGGGUUACUUAUCAGUUGUUCCCAACCAUGCCA
MFE -39.80 kcal/mol
first miRCarta version 1.0
last miRCarta version 1.1
Clusters (10 kb)
(1 precursors)
hsa-6542.1

Predicted Structure

ce5e3428-4c40-4081-88be-708fcad1ac15c34dd363-8bc5-42f7-8909-2e35a52a17f6c34dd363-8bc5-42f7-8909-2e35a52a17f6568a6071-92bc-41ab-81a6-09c98d03c78a568a6071-92bc-41ab-81a6-09c98d03c78a0ccbce2f-e403-41d0-9cb3-4137da045e040ccbce2f-e403-41d0-9cb3-4137da045e04d6fdfbf3-80a8-41bd-889e-8458f2649df8d6fdfbf3-80a8-41bd-889e-8458f2649df82c13d8ac-9368-4dae-b92a-73053dea111e2c13d8ac-9368-4dae-b92a-73053dea111e60ef75f9-928e-41a1-aa27-798559a844f460ef75f9-928e-41a1-aa27-798559a844f46b6b488e-2ef0-41ef-840b-43b4e5c4e2e26b6b488e-2ef0-41ef-840b-43b4e5c4e2e267e25ee4-5d9e-4fe6-85e9-c7b2cb1cbc1467e25ee4-5d9e-4fe6-85e9-c7b2cb1cbc1487ca8ead-2277-4d1a-8a29-7f1f6b49ec8087ca8ead-2277-4d1a-8a29-7f1f6b49ec800cd3c578-84fc-4f28-8863-b677620496f10cd3c578-84fc-4f28-8863-b677620496f10b52db14-14cc-43d0-a3f5-a600fb602b150b52db14-14cc-43d0-a3f5-a600fb602b153eab9263-cdaa-4d1a-9256-e37d2a789a6b3eab9263-cdaa-4d1a-9256-e37d2a789a6b78cd7b5b-bdba-4f05-afa3-55825998159b78cd7b5b-bdba-4f05-afa3-55825998159bdcba4cc3-da50-4913-ac08-27eae2b64cb3cdf177a1-53ba-4c98-8591-7a4721da89aa488465f5-b854-4c03-adf0-4c2a898ca6cfdcba4cc3-da50-4913-ac08-27eae2b64cb3cdf177a1-53ba-4c98-8591-7a4721da89aa2a42d747-45d8-400c-b058-a2a275fea8dab7310022-b7a3-438f-adbb-292a96eeb90acdf177a1-53ba-4c98-8591-7a4721da89aa2a42d747-45d8-400c-b058-a2a275fea8dac935a487-6928-44b3-8193-f9674fbe754e368d98d0-1c11-4342-9e53-98b144ee23052a42d747-45d8-400c-b058-a2a275fea8dac935a487-6928-44b3-8193-f9674fbe754e628ae6f0-f9e5-4f35-8e58-a8d293a88a8854d11f1c-28ac-4faf-bb01-674735b5acf2c935a487-6928-44b3-8193-f9674fbe754e628ae6f0-f9e5-4f35-8e58-a8d293a88a88b02e0195-ac42-4988-9d2a-7b6d7dee13a9367f1d2c-35b5-4baa-9bc2-360ceb6c2927628ae6f0-f9e5-4f35-8e58-a8d293a88a88b02e0195-ac42-4988-9d2a-7b6d7dee13a9790fbd7d-b9ed-44c0-9ff1-50bad4200eeecf7c6cb5-6af6-4d9f-aa0f-0922e8ef8db9b02e0195-ac42-4988-9d2a-7b6d7dee13a9790fbd7d-b9ed-44c0-9ff1-50bad4200eee190508a2-9d74-4b49-b9f2-b1dd3f12e9ddf6f3a3b9-3a81-4e23-a71e-22ef12106bf1790fbd7d-b9ed-44c0-9ff1-50bad4200eee190508a2-9d74-4b49-b9f2-b1dd3f12e9dd0f57dbd0-5224-414a-923f-fa51df98514d9e856f76-84a3-4cf9-9493-56018a0a073f190508a2-9d74-4b49-b9f2-b1dd3f12e9dd0f57dbd0-5224-414a-923f-fa51df98514d99d155fb-0318-4d47-a932-e6d41b943fe7951f6ed4-a9e1-4d8b-bd86-032ca90046370f57dbd0-5224-414a-923f-fa51df98514d99d155fb-0318-4d47-a932-e6d41b943fe7aca696ad-c37f-42d9-8e06-6dade0e0db55ad79bb77-ce82-41b5-a481-c7c127223a6e99d155fb-0318-4d47-a932-e6d41b943fe7aca696ad-c37f-42d9-8e06-6dade0e0db554e0e4a0b-8f33-498e-ac57-635a1960c65768714d32-5e4a-471d-817f-c40551c3b0c4aca696ad-c37f-42d9-8e06-6dade0e0db554e0e4a0b-8f33-498e-ac57-635a1960c657d72657fc-3d36-48b4-b555-6a4356e780fd76eb5293-a943-4ad2-9baa-fd68f934149a4e0e4a0b-8f33-498e-ac57-635a1960c657d72657fc-3d36-48b4-b555-6a4356e780fd7f1c9e12-e0bf-4e88-95f4-a620b8d75e0539c3ff3e-d7b9-452c-afa7-fe0a909aa218d72657fc-3d36-48b4-b555-6a4356e780fd7f1c9e12-e0bf-4e88-95f4-a620b8d75e050a4d7506-1af7-4183-8300-15f3b9732287dc616a64-c3e0-4d58-935f-83e40aee187f7f1c9e12-e0bf-4e88-95f4-a620b8d75e050a4d7506-1af7-4183-8300-15f3b973228741451f28-99d3-4116-a8a2-9b69759fa030691d5b64-8ac4-48e3-88c2-27c08ff127490a4d7506-1af7-4183-8300-15f3b973228741451f28-99d3-4116-a8a2-9b69759fa0305d3f785b-3696-4ab6-91bd-650976a49e8a7c42da8c-684c-417d-9dcc-20b6d25e9d4341451f28-99d3-4116-a8a2-9b69759fa0305d3f785b-3696-4ab6-91bd-650976a49e8a7e8208c1-1a56-446c-838d-f7d6cd3627d48eafbbd8-4c4d-4fc5-815f-5b9d7f3945a95d3f785b-3696-4ab6-91bd-650976a49e8a7e8208c1-1a56-446c-838d-f7d6cd3627d462297359-c556-4781-9cea-c9e0714156040ef39376-5ce7-48d7-b6ce-06839e9551b37e8208c1-1a56-446c-838d-f7d6cd3627d462297359-c556-4781-9cea-c9e071415604a531786a-5ea2-42fc-8756-1816a27b72c3d7467091-4d11-40c7-878c-73cda396069862297359-c556-4781-9cea-c9e071415604a531786a-5ea2-42fc-8756-1816a27b72c3a6d414d0-1600-41f9-9ff7-b0093087f83e4d065876-4bee-4077-8e51-9eb2810eedfda531786a-5ea2-42fc-8756-1816a27b72c3a6d414d0-1600-41f9-9ff7-b0093087f83e8be7f326-db94-4ac7-98d1-f82ae5e7437f6b5a5950-c861-4461-86e2-eaedaf90f2b2a6d414d0-1600-41f9-9ff7-b0093087f83e8be7f326-db94-4ac7-98d1-f82ae5e7437f8be7f326-db94-4ac7-98d1-f82ae5e7437f96bf8935-0bb7-4d32-b954-556283565e937e874bcb-f0d5-4385-ae4e-bc868d59b542dbb9cf7d-2430-494b-aa99-3fafdeb9a37396bf8935-0bb7-4d32-b954-556283565e937e874bcb-f0d5-4385-ae4e-bc868d59b542f062e4d7-9a0a-467d-b430-6e54ef42fe389f94566a-7b6c-4b9f-8d8a-b980ac60112e7e874bcb-f0d5-4385-ae4e-bc868d59b542f062e4d7-9a0a-467d-b430-6e54ef42fe38f062e4d7-9a0a-467d-b430-6e54ef42fe382be58117-14e6-4029-83d7-e97b64d65e1d2be58117-14e6-4029-83d7-e97b64d65e1dcb203522-877d-430d-9008-7699726e5c9569f4e84d-adac-47d5-88db-599b302a3cdbd06a55cd-6932-4dbd-b586-42b825d7a6f7cb203522-877d-430d-9008-7699726e5c9569f4e84d-adac-47d5-88db-599b302a3cdb35742b74-0ea4-4022-ae12-984cda63d7de693e938c-41c1-4d14-b5ff-524a0aad99ad69f4e84d-adac-47d5-88db-599b302a3cdb35742b74-0ea4-4022-ae12-984cda63d7de2a42dcc2-c5fe-4fa7-bbe9-087130b3e6407f81223c-b558-428e-8747-77e98680669335742b74-0ea4-4022-ae12-984cda63d7de2a42dcc2-c5fe-4fa7-bbe9-087130b3e640ba185e7a-3667-4a89-a569-980304c3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a192d2fddb200c18-ba29-45de-bd52-aca38ce8de9c6a12d6df-c6ec-4af6-9bda-776c3b456fd576eb5293-a943-4ad2-9baa-fd68f934149ab9432e73-88b3-4c4d-bb55-f5fb02d33195b7310022-b7a3-438f-adbb-292a96eeb90a5a3983ff-94cc-4948-ac8f-be3e3baa81deempty:1empty:1Uempty:1empty:2empty:2Aempty:2empty:3empty:3Uempty:3empty:4empty:4Uempty:4empty:5empty:5Uempty:5empty:6empty:6Uempty:6empty:7empty:7Cempty:7empty:8empty:8Aempty:8empty:9empty:9Uempty:9empty:10empty:10Cempty:10empty:11empty:11Aempty:11empty:12empty:12Uempty:12empty:13empty:13Uempty:13empty:14empty:14Cempty:14empty:15empty:15Uempty:15m-6542empty:16Um-6542m-6542empty:17Gm-6542m-6542empty:18Gm-6542m-6542empty:19Cm-6542m-6542empty:20Am-6542m-6542empty:21Um-6542m-6542empty:22Gm-6542m-6542empty:23Gm-6542m-6542empty:24Um-6542m-6542empty:25Um-6542m-6542empty:26Gm-6542m-6542empty:27Gm-6542m-6542empty:28Gm-6542m-6542empty:29Am-6542m-6542empty:30Gm-6542m-6542empty:31Cm-6542m-6542empty:32Am-6542m-6542empty:33Am-6542m-6542empty:34Um-6542m-6542empty:35Um-6542m-6542empty:36Gm-6542m-6542empty:37Um-6542empty:38empty:38Uempty:38empty:39empty:39Aempty:39empty:40empty:40Cempty:40empty:41empty:41Uempty:41empty:42empty:42Uempty:42empty:43empty:43Aempty:43empty:44empty:44Aempty:44empty:45empty:45Cempty:45empty:46empty:46Aempty:46empty:47empty:47Gempty:47empty:48empty:48Uempty:48empty:49empty:49Uempty:49empty:50empty:50Gempty:50empty:51empty:51Gempty:51empty:52empty:52Gempty:52empty:53empty:53Uempty:53empty:54empty:54Uempty:54empty:55empty:55Aempty:55empty:56empty:56Cempty:56empty:57empty:57Uempty:57empty:58empty:58Uempty:58empty:59empty:59Aempty:59empty:60empty:60Uempty:60empty:61empty:61Cempty:61empty:62empty:62Aempty:62empty:63empty:63Gempty:63empty:64empty:64Uempty:64empty:65empty:65Uempty:65empty:66empty:66Gempty:66empty:67empty:67Uempty:67empty:68empty:68Uempty:68empty:69empty:69Cempty:69empty:70empty:70Cempty:70empty:71empty:71Cempty:71empty:72empty:72Aempty:72empty:73empty:73Aempty:73empty:74empty:74Cempty:74empty:75empty:75Cempty:75empty:76empty:76Aempty:76empty:77empty:77Uempty:77empty:78empty:78Gempty:78empty:79empty:79Cempty:79empty:80empty:80Cempty:80empty:81empty:81Aempty:811020304050607080
UAUUUUCAUCAUUCUUGGCAUGGUUGGGAGCAAUUGUUACUUAACAGUUGGGUUACUUAUCAGUUGUUCCCAACCAUGCCA051015
RPMMone mismatchno mismatch
UAUUUUCAUCAUUCUUGGCAUGGUUGGGAGCAAUUGUUACUUAACAGUUGGGUUACUUAUCAGUUGUUCCCAACCAUGCCA050100150
number of readsone mismatchno mismatch

Genomic context

GCF_000001405.36_GRCh38.p10 8:28,291,345-28,311,42528,292,00028,294,00028,296,00028,298,00028,300,00028,302,00028,304,00028,306,00028,308,00028,310,000RPL5P22><hsa-6542.1
Gene legend:
pseudogene
miRCarta_miRNA

References

Authors Journal Year Pubmed link Title
1 Londin et al. Proc. Natl. Acad. Sci. U.S.A. 2015 25713380 Analysis of 13 cell types reveals evidence for the expression of numerous novel primate- and tissue-specific microRNAs.
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