Precursor miRCarta

hsa-5050.1

Accession hsa-5050.1
Organism Homo sapiens
Genome GRCh38.p10
Location 5:176,879,654-176,879,719 (+)
miRNA m-5050
Sequence (5' -> 3')
(66 nts)
CCAGGGGGGGCAGGAGGUGUCGGCUGGGGCCAGGCCAGGCUGCUGACGGCCCCCCUCCCCUCCACA
MFE -36.30 kcal/mol
first miRCarta version 1.0
last miRCarta version 1.1
Clusters (10 kb)
(1 precursors)
hsa-5050.1

Predicted Structure

a7c89874-c05d-48b1-9adc-a109dd7d88cff1fb50bc-8781-447b-ae3e-e72229314ad9f1fb50bc-8781-447b-ae3e-e72229314ad9d4d9dc00-7b9f-42c0-b0c4-404c0fba95fe508726a3-175e-4623-9304-b6a6dd887f0771dc9456-9074-442d-8cce-ccbfeaf04bf3d4d9dc00-7b9f-42c0-b0c4-404c0fba95fe508726a3-175e-4623-9304-b6a6dd887f0700f77129-a5ce-484d-bfcb-e7e57bb402bdf78c8629-b4d7-40c7-a63b-23123736c90c508726a3-175e-4623-9304-b6a6dd887f0700f77129-a5ce-484d-bfcb-e7e57bb402bda586ddc7-3748-4a0e-b73b-25797ed0ba2bb2d09b8a-e169-4f56-9c04-378e0f8ef3aa00f77129-a5ce-484d-bfcb-e7e57bb402bda586ddc7-3748-4a0e-b73b-25797ed0ba2b4e6e89eb-6100-4cba-8d69-6fbdf2b67e7c76653ac1-0ff0-4d83-9967-5b61804d58eba586ddc7-3748-4a0e-b73b-25797ed0ba2b4e6e89eb-6100-4cba-8d69-6fbdf2b67e7cbd0e44e6-bba4-4317-af01-21931036dff5c1c27304-a4b2-4646-84d6-83164ed832974e6e89eb-6100-4cba-8d69-6fbdf2b67e7cbd0e44e6-bba4-4317-af01-21931036dff50673d159-75c8-4c2f-93a3-22a4d02374dd64f8a985-10e7-48c5-8965-7b5b468f9bd3bd0e44e6-bba4-4317-af01-21931036dff50673d159-75c8-4c2f-93a3-22a4d02374dde35a7219-bcee-4656-ae77-0e0f1a16732dcbfeae60-0b67-4b21-a736-22bb2ebf08e30673d159-75c8-4c2f-93a3-22a4d02374dde35a7219-bcee-4656-ae77-0e0f1a16732de35a7219-bcee-4656-ae77-0e0f1a16732d61830034-1f53-415c-b5b4-d1cebfcca08361830034-1f53-415c-b5b4-d1cebfcca0831c94d73b-7c45-43fc-821b-fe81465d083bdad5d660-e199-4af0-80f8-611a334e24f1fae57c7e-d743-4c2c-8ab6-89d12d1c33f11c94d73b-7c45-43fc-821b-fe81465d083bdad5d660-e199-4af0-80f8-611a334e24f1e9a7e4a7-c9d4-41e7-a0b1-340ebcc1585689e2bad9-fe51-4019-acdd-3429d75c3ca9dad5d660-e199-4af0-80f8-611a334e24f1e9a7e4a7-c9d4-41e7-a0b1-340ebcc15856e9a7e4a7-c9d4-41e7-a0b1-340ebcc1585610965c50-ebce-4543-a343-ce4bdaffc1bad411c582-3060-46bd-832c-2bdf8f76d69122f5a304-5258-4364-97ef-b7c893f0eb3410965c50-ebce-4543-a343-ce4bdaffc1bad411c582-3060-46bd-832c-2bdf8f76d691f858c478-6103-42c6-815c-76667cabd6caf3be35f2-84be-4f79-9e3b-c5ac1eb98fb5d411c582-3060-46bd-832c-2bdf8f76d691f858c478-6103-42c6-815c-76667cabd6cabfc22579-06b9-439f-b00d-994ac66f9c7dc98d2cd5-85fe-4203-b39b-0770cd235589f858c478-6103-42c6-815c-76667cabd6cabfc22579-06b9-439f-b00d-994ac66f9c7df34e2ac2-5bed-4fcf-af48-5073722558ebc0e5fd0a-bc86-4fa2-bf76-017b7d6cfe9cbfc22579-06b9-439f-b00d-994ac66f9c7df34e2ac2-5bed-4fcf-af48-5073722558eb5aa95883-0517-4b27-81e6-17503393a782274b376f-9547-4676-ad84-eec427a055bdf34e2ac2-5bed-4fcf-af48-5073722558eb5aa95883-0517-4b27-81e6-17503393a782214ee66b-6721-4d0f-b53b-c95a9590ea8f51867049-6e0d-4b3b-bb48-ab4e387cacb25aa95883-0517-4b27-81e6-17503393a782214ee66b-6721-4d0f-b53b-c95a9590ea8f0f53b279-d819-42d0-a0ef-dde61bb7983bc8975091-d34d-42c8-8a65-e75ce6d13502214ee66b-6721-4d0f-b53b-c95a9590ea8f0f53b279-d819-42d0-a0ef-dde61bb7983bb46c0c1f-1943-4228-b69e-4b5a81821dc1b79927b2-a1ee-4014-a9a8-2085dd7713c10f53b279-d819-42d0-a0ef-dde61bb7983bb46c0c1f-1943-4228-b69e-4b5a81821dc15eace09a-57ea-4fbc-8545-6de86086847f4e667259-e70e-4338-afc8-35a684e96ec7b46c0c1f-1943-4228-b69e-4b5a81821dc15eace09a-57ea-4fbc-8545-6de86086847f5eace09a-57ea-4fbc-8545-6de86086847f7b2ef9fe-3c8f-412d-985f-56d710eaf7917b2ef9fe-3c8f-412d-985f-56d710eaf791dcaf3838-2c3c-496e-92b2-61d8b4ba4834dcaf3838-2c3c-496e-92b2-61d8b4ba48343fa120f3-b7a9-4fd1-b3f7-5c300975caedf3c35738-7d5c-4c47-a6fb-3698b525de91daeeb9b4-6c25-4fd1-9763-3f9764e34c9c3fa120f3-b7a9-4fd1-b3f7-5c300975caedf3c35738-7d5c-4c47-a6fb-3698b525de911365654f-5dce-4f92-9a2c-e9b470ef158ba2b09ee3-523a-4f79-91e4-3b2a866ebae2f3c35738-7d5c-4c47-a6fb-3698b525de911365654f-5dce-4f92-9a2c-e9b470ef158be9b5734f-423e-4a93-97fb-c9234c90f99106e4fe41-f1b8-4d7c-80c8-9fa266a460bc1365654f-5dce-4f92-9a2c-e9b470ef158be9b5734f-423e-4a93-97fb-c9234c90f991d1705b7d-ec2a-4db4-89c1-9fb117ab143f537cd9a0-c15f-4e43-aa91-7f10c2517719e9b5734f-423e-4a93-97fb-c9234c90f991d1705b7d-ec2a-4db4-89c1-9fb117ab143fd1705b7d-ec2a-4db4-89c1-9fb117ab143f309fdc97-a5be-441a-b8a9-8d6ae40295d4309fdc97-a5be-441a-b8a9-8d6ae40295d408da66c0-a41d-4ab2-8412-e6dae0f5080408da66c0-a41d-4ab2-8412-e6dae0f5080421f2ec5f-653d-4f69-a1b3-6336ddaf264b21f2ec5f-653d-4f69-a1b3-6336ddaf264b619e0775-4b30-4b7c-bae6-421853d91071619e0775-4b30-4b7c-bae6-421853d9107135618fd3-9814-4598-8f18-e6a07911e7ad35618fd3-9814-4598-8f18-e6a07911e7ad8b49d2cf-754f-4f74-844d-819d35145176537cd9a0-c15f-4e43-aa91-7f10c2517719d1705b7d-ec2a-4db4-89c1-9fb117ab143f8b49d2cf-754f-4f74-844d-819d35145176537cd9a0-c15f-4e43-aa91-7f10c251771906e4fe41-f1b8-4d7c-80c8-9fa266a460bce9b5734f-423e-4a93-97fb-c9234c90f991537cd9a0-c15f-4e43-aa91-7f10c251771906e4fe41-f1b8-4d7c-80c8-9fa266a460bca2b09ee3-523a-4f79-91e4-3b2a866ebae21365654f-5dce-4f92-9a2c-e9b470ef158b06e4fe41-f1b8-4d7c-80c8-9fa266a460bca2b09ee3-523a-4f79-91e4-3b2a866ebae2daeeb9b4-6c25-4fd1-9763-3f9764e34c9cf3c35738-7d5c-4c47-a6fb-3698b525de91a2b09ee3-523a-4f79-91e4-3b2a866ebae2daeeb9b4-6c25-4fd1-9763-3f9764e34c9c4e667259-e70e-4338-afc8-35a684e96ec75eace09a-57ea-4fbc-8545-6de86086847fdaeeb9b4-6c25-4fd1-9763-3f9764e34c9c4e667259-e70e-4338-afc8-35a684e96ec7b79927b2-a1ee-4014-a9a8-2085dd7713c1b46c0c1f-1943-4228-b69e-4b5a81821dc14e667259-e70e-4338-afc8-35a684e9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:3empty:4empty:4Gempty:4empty:5empty:5Gempty:5empty:6empty:6Gempty:6empty:7empty:7Gempty:7empty:8empty:8Gempty:8empty:9empty:9Gempty:9empty:10empty:10Gempty:10empty:11empty:11Cempty:11empty:12empty:12Aempty:12empty:13empty:13Gempty:13empty:14empty:14Gempty:14empty:15empty:15Aempty:15empty:16empty:16Gempty:16empty:17empty:17Gempty:17empty:18empty:18Uempty:18empty:19empty:19Gempty:19empty:20empty:20Uempty:20empty:21empty:21Cempty:21empty:22empty:22Gempty:22empty:23empty:23Gempty:23empty:24empty:24Cempty:24empty:25empty:25Uempty:25empty:26empty:26Gempty:26empty:27empty:27Gempty:27empty:28empty:28Gempty:28empty:29empty:29Gempty:29empty:30empty:30Cempty:30empty:31empty:31Cempty:31empty:32empty:32Aempty:32empty:33empty:33Gempty:33empty:34empty:34Gempty:34empty:35empty:35Cempty:35empty:36empty:36Cempty:36empty:37empty:37Aempty:37empty:38empty:38Gempty:38empty:39empty:39Gempty:39empty:40empty:40Cempty:40empty:41empty:41Uempty:41empty:42empty:42Gempty:42empty:43empty:43Cempty:43m-5050empty:44Um-5050m-5050empty:45Gm-5050m-5050empty:46Am-5050m-5050empty:47Cm-5050m-5050empty:48Gm-5050m-5050empty:49Gm-5050m-5050empty:50Cm-5050m-5050empty:51Cm-5050m-5050empty:52Cm-5050m-5050empty:53Cm-5050m-5050empty:54Cm-5050m-5050empty:55Cm-5050m-5050empty:56Um-5050m-5050empty:57Cm-5050m-5050empty:58Cm-5050m-5050empty:59Cm-5050m-5050empty:60Cm-5050m-5050empty:61Um-5050m-5050empty:62Cm-5050m-5050empty:63Cm-5050m-5050empty:64Am-5050m-5050empty:65Cm-5050m-5050empty:66Am-5050empty:67empty:67Gempty:67empty:68empty:68Cempty:68empty:69empty:69Cempty:69empty:70empty:70Aempty:70empty:71empty:71Uempty:71empty:72empty:72Cempty:72empty:73empty:73Uempty:73empty:74empty:74Cempty:74empty:75empty:75Aempty:75empty:76empty:76Gempty:76empty:77empty:77Cempty:77empty:78empty:78Uempty:78empty:79empty:79Uempty:79empty:80empty:80Cempty:80empty:81empty:81Uempty:811020304050607080
CCAGGGGGGGCAGGAGGUGUCGGCUGGGGCCAGGCCAGGCUGCUGACGGCCCCCCUCCCCUCCACAGCCAUCUCAGCUUCU050100150200
RPMMone mismatchno mismatch
CCAGGGGGGGCAGGAGGUGUCGGCUGGGGCCAGGCCAGGCUGCUGACGGCCCCCCUCCCCUCCACAGCCAUCUCAGCUUCU050010001500
number of readsone mismatchno mismatch

Genomic context

GCF_000001405.36_GRCh38.p10 5:176,869,654-176,889,734176,870,000176,872,000176,874,000176,876,000176,878,000176,880,000176,882,000176,884,000176,886,000176,888,000UNC5A>hsa-5050.1><HK3
Gene legend:
protein coding
miRCarta_miRNA

References

Authors Journal Year Pubmed link Title
1 Londin et al. Proc. Natl. Acad. Sci. U.S.A. 2015 25713380 Analysis of 13 cell types reveals evidence for the expression of numerous novel primate- and tissue-specific microRNAs.
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