Precursor miRCarta

hsa-5310.1

Accession hsa-5310.1
Organism Homo sapiens
Genome GRCh38.p10
Location 19:51,690,903-51,690,958 (+)
miRNA m-5310
Sequence (5' -> 3')
(56 nts)
GUGUGGGGGGGUGGGGGCGGGGGCAGCCUCCUCCCUUCCCCUUCCUCCCCACCUUG
MFE -36.90 kcal/mol
first miRCarta version 1.0
last miRCarta version 1.1
Clusters (10 kb)
(7 precursors)
hsa-19413-15996.1
hsa-12419-12344.1
hsa-12344-21057.1
hsa-5310.1
hsa-10-151.1
hsa-50-260.1
hsa-63-333.1

Predicted Structure

911828f8-399d-49d9-858c-adc9250d7a58b9650b39-51d2-44d7-b5df-c16d713962ef20405ebf-d981-4c9f-b644-c8a4e5bd8e6c34c7aefe-403e-42c2-a782-041023e9b4e9b9650b39-51d2-44d7-b5df-c16d713962ef20405ebf-d981-4c9f-b644-c8a4e5bd8e6c92e0d377-aec3-48d3-8365-4bced7d63a648b163eb1-919d-4fff-9f40-1e129f594db620405ebf-d981-4c9f-b644-c8a4e5bd8e6c92e0d377-aec3-48d3-8365-4bced7d63a64d5f8bd30-4faa-4c3b-a103-9f093c93a7392a784837-b4ff-46bb-8fa7-46299813772e92e0d377-aec3-48d3-8365-4bced7d63a64d5f8bd30-4faa-4c3b-a103-9f093c93a739e5c8095d-dc20-4eb6-8677-416deb9d78d6a681210f-21d1-4f7c-bb69-3df8d0cf95e6d5f8bd30-4faa-4c3b-a103-9f093c93a739e5c8095d-dc20-4eb6-8677-416deb9d78d6a1e30370-31a0-403e-aa74-bf20d5c347653aa6e3d1-971c-4c6e-ac15-b6f963bbc869e5c8095d-dc20-4eb6-8677-416deb9d78d6a1e30370-31a0-403e-aa74-bf20d5c34765269431cf-38e2-4dd4-b951-eae86fb6cda74fbe3b06-4a12-4a55-b538-4131d7527ed7a1e30370-31a0-403e-aa74-bf20d5c34765269431cf-38e2-4dd4-b951-eae86fb6cda7d64f15a2-71be-456a-855d-9793f23bdda783395d7b-2eed-4bda-9bb4-2d40ec70b382269431cf-38e2-4dd4-b951-eae86fb6cda7d64f15a2-71be-456a-855d-9793f23bdda76ca28fa6-98e3-4c54-b93a-d584f3e3f7bc3d5baac7-4b26-4764-a838-249cde1460ead64f15a2-71be-456a-855d-9793f23bdda76ca28fa6-98e3-4c54-b93a-d584f3e3f7bc1fa9aa2f-3113-4036-b2b8-4334f5500223e46bb45c-0e31-4008-a3ca-db9616b6e55d6ca28fa6-98e3-4c54-b93a-d584f3e3f7bc1fa9aa2f-3113-4036-b2b8-4334f55002231fa9aa2f-3113-4036-b2b8-4334f55002232c5d2568-886a-4f8d-a2af-1061a4cf31339734e787-3915-4cdb-8760-54a921b245ee84cdcbc4-1d75-4e4d-ace1-6ffd0d512b9e2c5d2568-886a-4f8d-a2af-1061a4cf31339734e787-3915-4cdb-8760-54a921b245eedbfa68c5-bf08-45b4-b99a-8ae29b8212c3a4507cec-2b44-4a16-99a8-6b58b5d9c4209734e787-3915-4cdb-8760-54a921b245eedbfa68c5-bf08-45b4-b99a-8ae29b8212c3999f6aec-4bef-4ae3-ac40-7a0b73ea8d63b18809ee-b220-4f3e-90a0-e3644002f485dbfa68c5-bf08-45b4-b99a-8ae29b8212c3999f6aec-4bef-4ae3-ac40-7a0b73ea8d63a48bcb8d-bf73-4502-94d4-959e80de918ce83e7afb-e460-475b-9c6d-84f709428bf5999f6aec-4bef-4ae3-ac40-7a0b73ea8d63a48bcb8d-bf73-4502-94d4-959e80de918c9694cbe4-6b71-4621-bf1f-805765ca526128f9576f-20ff-4314-8c40-78c9c750a206a48bcb8d-bf73-4502-94d4-959e80de918c9694cbe4-6b71-4621-bf1f-805765ca52619694cbe4-6b71-4621-bf1f-805765ca526185ee7d3d-16cd-44bd-bc70-4aa3cb0e4d96c6e21e6d-07ea-4cea-84e1-bc11452bb3f3c0b49411-7e9f-4218-a6e2-e57ec104dab485ee7d3d-16cd-44bd-bc70-4aa3cb0e4d96c6e21e6d-07ea-4cea-84e1-bc11452bb3f3b9b4a627-36e3-4dd9-b888-78fe609514e82fc20d53-6c4b-4ab1-a555-7768e4ade22dc6e21e6d-07ea-4cea-84e1-bc11452bb3f3b9b4a627-36e3-4dd9-b888-78fe609514e812b1377b-e57f-453a-9eb7-52f856097ad71cecdb67-3d93-471b-8d40-fa8cacde76dbb9b4a627-36e3-4dd9-b888-78fe609514e812b1377b-e57f-453a-9eb7-52f856097ad7e5589111-94a3-429e-9f37-e068d86a4411807cdd82-4163-4247-9b7b-b60c285438f212b1377b-e57f-453a-9eb7-52f856097ad7e5589111-94a3-429e-9f37-e068d86a441114e42ddb-92be-48d8-83b2-52d54b03e1244d5b152f-bf89-4844-af89-d381fe137e80e5589111-94a3-429e-9f37-e068d86a441114e42ddb-92be-48d8-83b2-52d54b03e12414e42ddb-92be-48d8-83b2-52d54b03e124b37b2cff-0f8b-4ae4-a6b6-59a6b1d3a8b6b37b2cff-0f8b-4ae4-a6b6-59a6b1d3a8b6a84144c2-1772-48a7-ba3f-ef139487c450a84144c2-1772-48a7-ba3f-ef139487c450427a3a9a-a140-44c8-9e28-cf009f59b4e6427a3a9a-a140-44c8-9e28-cf009f59b4e6c9fe742b-3e6d-4f52-ad12-9187317b8658c9fe742b-3e6d-4f52-ad12-9187317b86584c713ec6-53bb-4f5b-90b9-fd3099c8e3bd4c713ec6-53bb-4f5b-90b9-fd3099c8e3bd385249a2-5a5f-4262-b043-0d8508ee4c7c385249a2-5a5f-4262-b043-0d8508ee4c7c24348299-43ab-4d11-aad7-7828f81eca6624348299-43ab-4d11-aad7-7828f81eca66ae1f9b48-0274-4563-8db3-a5c6bee54bf54d5b152f-bf89-4844-af89-d381fe137e8014e42ddb-92be-48d8-83b2-52d54b03e124ae1f9b48-0274-4563-8db3-a5c6bee54bf54d5b152f-bf89-4844-af89-d381fe137e80807cdd82-4163-4247-9b7b-b60c285438f2e5589111-94a3-429e-9f37-e068d86a44114d5b152f-bf89-4844-af89-d381fe137e80807cdd82-4163-4247-9b7b-b60c285438f21cecdb67-3d93-471b-8d40-fa8cacde76db12b1377b-e57f-453a-9eb7-52f856097ad7807cdd82-4163-4247-9b7b-b60c285438f21cecdb67-3d93-471b-8d40-fa8cacde76db2fc20d53-6c4b-4ab1-a555-7768e4ade22db9b4a627-36e3-4dd9-b888-78fe609514e81cecdb67-3d93-471b-8d40-fa8cacde76db2fc20d53-6c4b-4ab1-a555-7768e4ade22dc0b49411-7e9f-4218-a6e2-e57ec104dab4c6e21e6d-07ea-4cea-84e1-bc11452bb3f32fc20d53-6c4b-4ab1-a555-7768e4ade22dc0b49411-7e9f-4218-a6e2-e57ec104dab4c0b49411-7e9f-4218-a6e2-e57ec104dab4ed94704c-117e-46cb-8db6-305de4f232b928f9576f-20ff-4314-8c40-78c9c750a2069694cbe4-6b71-4621-bf1f-805765ca5261ed94704c-117e-46cb-8db6-305de4f232b928f9576f-20ff-4314-8c40-78c9c750a206e83e7afb-e460-475b-9c6d-84f709428bf5a48bcb8d-bf73-4502-94d4-959e80de918c28f9576f-20ff-4314-8c40-78c9c750a206e83e7afb-e460-475b-9c6d-84f709428bf5b18809ee-b220-4f3e-90a0-e3644002f485999f6aec-4bef-4ae3-ac40-7a0b73ea8d63e83e7afb-e460-475b-9c6d-84f709428bf5b18809ee-b220-4f3e-90a0-e3644002f485a4507cec-2b44-4a16-99a8-6b58b5d9c420dbfa68c5-bf08-45b4-b99a-8ae29b8212c3b18809ee-b220-4f3e-90a0-e3644002f485a4507cec-2b44-4a16-99a8-6b58b5d9c42084cdcbc4-1d75-4e4d-ace1-6ffd0d512b9e9734e787-3915-4cdb-8760-54a921b245eea4507cec-2b44-4a16-99a8-6b58b5d9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ty:57empty:57Gempty:57empty:58empty:58Cempty:58empty:59empty:59Cempty:59empty:60empty:60Uempty:60empty:61empty:61Gempty:61empty:62empty:62Aempty:62empty:63empty:63Cempty:63empty:64empty:64Uempty:64empty:65empty:65Cempty:65empty:66empty:66Uempty:66empty:67empty:67Cempty:67empty:68empty:68Gempty:68empty:69empty:69Cempty:69empty:70empty:70Cempty:70empty:71empty:71Cempty:7110203040506070
GUGUGGGGGGGUGGGGGCGGGGGCAGCCUCCUCCCUUCCCCUUCCUCCCCACCUUGGCCUGACUCUCGCCC0200400
RPMMone mismatchno mismatch
GUGUGGGGGGGUGGGGGCGGGGGCAGCCUCCUCCCUUCCCCUUCCUCCCCACCUUGGCCUGACUCUCGCCC010002000
number of readsone mismatchno mismatch

Genomic context

Gene legend:

References

Authors Journal Year Pubmed link Title
1 Londin et al. Proc. Natl. Acad. Sci. U.S.A. 2015 25713380 Analysis of 13 cell types reveals evidence for the expression of numerous novel primate- and tissue-specific microRNAs.
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