Precursor miRCarta

hsa-3515.1

Accession hsa-3515.1
Organism Homo sapiens
Genome GRCh38.p10
Location 11:122,156,196-122,156,259 (-)
miRNA m-3515
Sequence (5' -> 3')
(64 nts)
CCAGGAAUCCUGCUGUGGUGGAGAGGCAUAGACUCAUGAGUCCACCACAAUCGGAUACUUGCUU
MFE -24.60 kcal/mol
first miRCarta version 1.0
last miRCarta version 1.1
Clusters (10 kb)
(5 precursors)
hsa-6-426.1
hsa-27-917.1
hsa-3515-8450.1
hsa-19358-14375.1
hsa-3515.1

Predicted Structure

f399e182-f97e-46cd-849b-5266d7b416524e2b862a-b9e0-423e-af09-c495ba5b46f54e2b862a-b9e0-423e-af09-c495ba5b46f5db950d00-d7d8-42ce-9e47-98f231bb1a75db950d00-d7d8-42ce-9e47-98f231bb1a752d4a22a4-5b2f-4eca-b57f-37f6427ee8f32d4a22a4-5b2f-4eca-b57f-37f6427ee8f3cc9ea40a-2804-4fd8-abdc-797e817093e3cc9ea40a-2804-4fd8-abdc-797e817093e3d884c0dd-50f5-473a-8fdd-c2b485d471d8d884c0dd-50f5-473a-8fdd-c2b485d471d8f98ca8b0-7a5b-42ba-9b0a-840555dc695bf98ca8b0-7a5b-42ba-9b0a-840555dc695bf578c87e-58ce-400a-b242-f842ddb26669f578c87e-58ce-400a-b242-f842ddb26669a5661ed9-0247-4325-adc4-ec0f3902ff92a5661ed9-0247-4325-adc4-ec0f3902ff920466e279-2297-4a66-9d9c-3a0e0bcbd57e0466e279-2297-4a66-9d9c-3a0e0bcbd57e8b31d043-4941-45a0-9949-fd0b21685b428b31d043-4941-45a0-9949-fd0b21685b42904c259a-53a3-4d4b-a596-0df2eb08b2bc0f0e5fd5-12f8-4035-a11b-5a3f8b6e428262b25305-b7c1-4908-b67c-4b650c3411f3904c259a-53a3-4d4b-a596-0df2eb08b2bc0f0e5fd5-12f8-4035-a11b-5a3f8b6e42821c5d5779-19d8-4f20-915a-34218e5a78ed23cdbe1a-bb42-49e8-b0e5-60839c155e1a0f0e5fd5-12f8-4035-a11b-5a3f8b6e42821c5d5779-19d8-4f20-915a-34218e5a78ed8ad0a7d9-82f2-48e8-a810-5b6a6807e11dfe128b90-ba57-4a5b-92e9-68d6e0003d261c5d5779-19d8-4f20-915a-34218e5a78ed8ad0a7d9-82f2-48e8-a810-5b6a6807e11dfb2973d2-dada-4ec9-b221-94677957bdf7568de995-9674-4711-9cdf-e72b30d717248ad0a7d9-82f2-48e8-a810-5b6a6807e11dfb2973d2-dada-4ec9-b221-94677957bdf7fb2973d2-dada-4ec9-b221-94677957bdf7a7f7229c-bc98-4efc-8812-2661fda4adfdbdc89526-29f7-436e-85f3-76277d60b7c87a679a2c-aabe-4853-a1eb-4be7dd4956e6a7f7229c-bc98-4efc-8812-2661fda4adfdbdc89526-29f7-436e-85f3-76277d60b7c8274252cd-f968-4304-9ba0-fd52fd735ccdcee729d4-cc34-41aa-99ae-c62c59678aa8bdc89526-29f7-436e-85f3-76277d60b7c8274252cd-f968-4304-9ba0-fd52fd735ccd031563e7-8ad0-45ad-8f35-1c11e8005230f37a81a0-7d3c-48ad-bd39-6c4a42930e02274252cd-f968-4304-9ba0-fd52fd735ccd031563e7-8ad0-45ad-8f35-1c11e8005230031563e7-8ad0-45ad-8f35-1c11e8005230fb11c4ed-5b6d-4270-9a39-4b92cf77b237ac9844d3-6c14-4e98-b6c9-0577c2c83af9bf615d0b-8ad3-41f7-a022-dee9aa2efee4fb11c4ed-5b6d-4270-9a39-4b92cf77b237ac9844d3-6c14-4e98-b6c9-0577c2c83af9cf28e79c-f981-41bf-84d7-28d30ba2ac677230a620-df1c-484a-aa83-78c3d3a34f35ac9844d3-6c14-4e98-b6c9-0577c2c83af9cf28e79c-f981-41bf-84d7-28d30ba2ac6747f8c149-2e2b-4fcc-9d44-5b74e20dfb8928742599-c140-455f-95e2-4094494aefbdcf28e79c-f981-41bf-84d7-28d30ba2ac6747f8c149-2e2b-4fcc-9d44-5b74e20dfb8997b6d7f2-b000-4443-b7d6-a6c355f2eb3a3c440a4d-8e92-4272-8b9e-4efd5a2895f447f8c149-2e2b-4fcc-9d44-5b74e20dfb8997b6d7f2-b000-4443-b7d6-a6c355f2eb3a97b6d7f2-b000-4443-b7d6-a6c355f2eb3a97a6b129-804a-4ee6-b744-dd6ade37d61a97a6b129-804a-4ee6-b744-dd6ade37d61aaa185637-a143-4e70-953f-6169c70a67daaa185637-a143-4e70-953f-6169c70a67da0d0bc637-1e09-48a9-9b99-c6c1663bff32e282f4fc-4b32-4321-8dad-16f1f585b30d1170348e-9ff0-40a7-8d1c-915d79188f5a0d0bc637-1e09-48a9-9b99-c6c1663bff32e282f4fc-4b32-4321-8dad-16f1f585b30d0aeea6b0-db17-403b-9466-874e7560d7774cc8bfdf-d5fe-4fa6-a099-02925f48c9a9e282f4fc-4b32-4321-8dad-16f1f585b30d0aeea6b0-db17-403b-9466-874e7560d7775b09eef4-6028-4fd3-b459-5b3f2067c502e0ad7928-8eca-45ab-9b8d-bf6ce16dec5a0aeea6b0-db17-403b-9466-874e7560d7775b09eef4-6028-4fd3-b459-5b3f2067c5021e1d89d4-92d9-4ecc-956c-2cecc7da44e58e7866e2-fdab-47ff-bd04-ef3482f266215b09eef4-6028-4fd3-b459-5b3f2067c5021e1d89d4-92d9-4ecc-956c-2cecc7da44e570765c67-64a9-42c3-a437-69155a34239223317c95-2f1b-4fff-b625-1b60459a17b21e1d89d4-92d9-4ecc-956c-2cecc7da44e570765c67-64a9-42c3-a437-69155a342392a11920bd-be5b-4246-8cd4-fd772209e60f8b463a7e-eb1b-4093-a18b-d6ead499fdd570765c67-64a9-42c3-a437-69155a342392a11920bd-be5b-4246-8cd4-fd772209e60f0b435850-7f9c-442d-b4ba-2fac95426949e5427bb0-743f-488d-9b3d-f3ffc9d20dbba11920bd-be5b-4246-8cd4-fd772209e60f0b435850-7f9c-442d-b4ba-2fac95426949a7444a75-367a-462e-b6b5-2af10ab10e0a32bd16b3-99b1-4d83-a05e-b18a8940285c0b435850-7f9c-442d-b4ba-2fac95426949a7444a75-367a-462e-b6b5-2af10ab10e0a35778ef1-e0bf-4f53-b046-cfc7ffdec048a9d53bd1-bb27-4767-9b8f-9c52a1b2af08a7444a75-367a-462e-b6b5-2af10ab10e0a35778ef1-e0bf-4f53-b046-cfc7ffdec04851061d0e-4c7c-4fa0-a28a-ca6c13650c94c838a8dd-120b-4c66-b721-a67dc0a61c4735778ef1-e0bf-4f53-b046-cfc7ffdec04851061d0e-4c7c-4fa0-a28a-ca6c13650c9466c1cf29-1d57-4987-99a0-82fb1068527707284b0a-79dd-4af0-941b-fdf5c10f05c151061d0e-4c7c-4fa0-a28a-ca6c13650c9466c1cf29-1d57-4987-99a0-82fb10685277eb207747-553e-48bf-8386-12ab382770dbceeab51b-6f89-4ec6-8237-4c9496fee22b66c1cf29-1d57-4987-99a0-82fb10685277eb207747-553e-48bf-8386-12ab382770dbeb207747-553e-48bf-8386-12ab382770dbb8bd0b81-f0d6-4f1a-8ef3-c12ad0841ea8b8bd0b81-f0d6-4f1a-8ef3-c12ad0841ea82df5575d-91ca-4bd4-b000-d3961787e96d2df5575d-91ca-4bd4-b000-d3961787e96def662d47-18e6-4145-afe0-d28cb5a1f8f2ef662d47-18e6-4145-afe0-d28cb5a1f8f2800a472d-798c-4a69-9e28-f2bf1b8b7476800a472d-798c-4a69-9e28-f2bf1b8b74769c364a6d-4af3-44a7-8bc4-8b12a3fe33ec9c364a6d-4af3-44a7-8bc4-8b12a3fe33ecc03289e7-9c6a-41cc-83fc-aae3832c6492c03289e7-9c6a-41cc-83fc-aae3832c64929bd48762-530c-4cf6-9c4a-7c63c49666d4ceeab51b-6f89-4ec6-8237-4c9496fe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y:26Um-3515m-3515empty:27Gm-3515m-3515empty:28Cm-3515m-3515empty:29Um-3515m-3515empty:30Gm-3515m-3515empty:31Um-3515m-3515empty:32Gm-3515m-3515empty:33Gm-3515m-3515empty:34Um-3515m-3515empty:35Gm-3515m-3515empty:36Gm-3515m-3515empty:37Am-3515empty:38empty:38Gempty:38empty:39empty:39Aempty:39empty:40empty:40Gempty:40empty:41empty:41Gempty:41empty:42empty:42Cempty:42empty:43empty:43Aempty:43empty:44empty:44Uempty:44empty:45empty:45Aempty:45empty:46empty:46Gempty:46empty:47empty:47Aempty:47empty:48empty:48Cempty:48empty:49empty:49Uempty:49empty:50empty:50Cempty:50empty:51empty:51Aempty:51empty:52empty:52Uempty:52empty:53empty:53Gempty:53empty:54empty:54Aempty:54empty:55empty:55Gempty:55empty:56empty:56Uempty:56empty:57empty:57Cempty:57empty:58empty:58Cempty:58empty:59empty:59Aempty:59empty:60empty:60Cempty:60empty:61empty:61Cempty:61empty:62empty:62Aempty:62empty:63empty:63Cempty:63empty:64empty:64Aempty:64empty:65empty:65Aempty:65empty:66empty:66Uempty:66empty:67empty:67Cempty:67empty:68empty:68Gempty:68empty:69empty:69Gempty:69empty:70empty:70Aempty:70empty:71empty:71Uempty:71empty:72empty:72Aempty:72empty:73empty:73Cempty:73empty:74empty:74Uempty:74empty:75empty:75Uempty:75empty:76empty:76Gempty:76empty:77empty:77Cempty:77empty:78empty:78Uempty:78empty:79empty:79Uempty:7910203040506070
ACACUGGAAUGGAAGCCAGGAAUCCUGCUGUGGUGGAGAGGCAUAGACUCAUGAGUCCACCACAAUCGGAUACUUGCUU0500100015002000
RPMMone mismatchno mismatch
ACACUGGAAUGGAAGCCAGGAAUCCUGCUGUGGUGGAGAGGCAUAGACUCAUGAGUCCACCACAAUCGGAUACUUGCUU05k10k15k20k
number of readsone mismatchno mismatch

Genomic context

Gene legend:

References

Authors Journal Year Pubmed link Title
1 Londin et al. Proc. Natl. Acad. Sci. U.S.A. 2015 25713380 Analysis of 13 cell types reveals evidence for the expression of numerous novel primate- and tissue-specific microRNAs.
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