Precursor miRCarta

hsa-3515.1

Accession hsa-3515.1
Organism Homo sapiens
Genome GRCh38.p10
Location 11:122,156,196-122,156,259 (-)
miRNA m-3515
Sequence (5' -> 3')
(64 nts)
CCAGGAAUCCUGCUGUGGUGGAGAGGCAUAGACUCAUGAGUCCACCACAAUCGGAUACUUGCUU
MFE -24.60 kcal/mol
first miRCarta version 1.0
last miRCarta version 1.1
Clusters (10 kb)
(5 precursors)
hsa-6-426.1
hsa-27-917.1
hsa-3515-8450.1
hsa-19358-14375.1
hsa-3515.1

Predicted Structure

bbf786a0-4ae8-46ec-8602-77811156bee9cd02d081-156c-41be-94d5-e2497fe0ee94cd02d081-156c-41be-94d5-e2497fe0ee94eea67613-b461-441d-9e88-0ac011b7f25beea67613-b461-441d-9e88-0ac011b7f25bc7d03dec-5c09-4010-9f3b-016dad3f9b38c7d03dec-5c09-4010-9f3b-016dad3f9b38886e6d9f-52ce-456e-95ac-6a0669e8f231886e6d9f-52ce-456e-95ac-6a0669e8f23160e0208b-eb66-4ffc-9aae-57d446977daa60e0208b-eb66-4ffc-9aae-57d446977daade53044f-b2c5-4b1e-9950-d2fc9a296315de53044f-b2c5-4b1e-9950-d2fc9a296315c967edd6-d07c-4051-86d6-c685ce1ac79bc967edd6-d07c-4051-86d6-c685ce1ac79bfbd42cbd-64ef-412e-910b-6d37a9dd8956fbd42cbd-64ef-412e-910b-6d37a9dd8956acf7f57c-0f44-48f4-aa93-5fb539a9e61bacf7f57c-0f44-48f4-aa93-5fb539a9e61ba974e64f-e7b5-4ba9-979f-34fc3b8d9876a974e64f-e7b5-4ba9-979f-34fc3b8d987607a6da45-6647-454a-abd2-611c4e2b620a53b5d7d0-c7f7-4b60-92ca-18ee42023dc6a6550e85-6b79-4214-b238-b908b28a110607a6da45-6647-454a-abd2-611c4e2b620a53b5d7d0-c7f7-4b60-92ca-18ee42023dc6eeb537a5-4a84-4fca-be8e-4ab279e34ffa48b5b61e-1321-42ee-b737-ef552e691a6653b5d7d0-c7f7-4b60-92ca-18ee42023dc6eeb537a5-4a84-4fca-be8e-4ab279e34ffad7b8061e-09d6-4fb5-b128-05fbaa7d698581e28e82-a17e-4628-960e-6601826a2818eeb537a5-4a84-4fca-be8e-4ab279e34ffad7b8061e-09d6-4fb5-b128-05fbaa7d6985029745ed-fca4-47f8-93fc-4ecba8670be0ab9cb176-51fc-4678-849a-d28a7df3ee1ad7b8061e-09d6-4fb5-b128-05fbaa7d6985029745ed-fca4-47f8-93fc-4ecba8670be0029745ed-fca4-47f8-93fc-4ecba8670be0932e8cc1-64bb-4bec-b00e-573314bba5aced5822f8-5488-4e25-a330-9c1d6037895d8f292b93-8c43-48f5-839f-940011443918932e8cc1-64bb-4bec-b00e-573314bba5aced5822f8-5488-4e25-a330-9c1d6037895db18200aa-3312-43a0-b96c-18ed1d318dfa8e988a23-64d1-4b88-948b-35e4a7f8bab0ed5822f8-5488-4e25-a330-9c1d6037895db18200aa-3312-43a0-b96c-18ed1d318dfacf698a64-5151-4d78-94cf-5d8395a64fd8a7d2744a-3dd6-4070-885e-85a8c25abb73b18200aa-3312-43a0-b96c-18ed1d318dfacf698a64-5151-4d78-94cf-5d8395a64fd8cf698a64-5151-4d78-94cf-5d8395a64fd828991147-1805-4aac-bb13-6b085410dd934a556019-5f0b-462a-bb07-9360efdb84359715df85-7bd4-4644-9934-52d7d5d5cfd928991147-1805-4aac-bb13-6b085410dd934a556019-5f0b-462a-bb07-9360efdb8435acf8d2c7-6844-490e-824b-745fe55b9ddf3e5f4c00-9e79-42ef-ad75-5642160a2ce74a556019-5f0b-462a-bb07-9360efdb8435acf8d2c7-6844-490e-824b-745fe55b9ddf6a3955da-6bf2-421e-91ef-0d04fce68abda8cf9517-0550-4f49-8a70-30fd2b4303a4acf8d2c7-6844-490e-824b-745fe55b9ddf6a3955da-6bf2-421e-91ef-0d04fce68abd533aa87a-6ecc-45af-89e4-0d21c394e7bf9e6532f2-e0be-4682-a597-6cf238a4d4946a3955da-6bf2-421e-91ef-0d04fce68abd533aa87a-6ecc-45af-89e4-0d21c394e7bf533aa87a-6ecc-45af-89e4-0d21c394e7bf8764572e-b979-4e21-8d1d-cf175d9feaee8764572e-b979-4e21-8d1d-cf175d9feaeeba9f39c7-fc55-41cb-87f5-c247f04969dcba9f39c7-fc55-41cb-87f5-c247f04969dcf5161890-8496-4734-a9ae-b241153673b691e49193-6777-4a3e-8cad-28ddc0c1e089a7e29be2-b25e-4db1-8ed9-d78463c23101f5161890-8496-4734-a9ae-b241153673b691e49193-6777-4a3e-8cad-28ddc0c1e089489e6c98-f745-4039-842c-272540da3eb75ea94dc3-7cf1-42ec-b246-cae2ca57e8d191e49193-6777-4a3e-8cad-28ddc0c1e089489e6c98-f745-4039-842c-272540da3eb76c6d9410-16d2-4d8b-a086-35c838d1c03394087692-6137-44b8-9f3d-84204d79632d489e6c98-f745-4039-842c-272540da3eb76c6d9410-16d2-4d8b-a086-35c838d1c033eb94349f-30a5-4ba1-92c8-f342104ef0ee13b645f8-ef96-489e-a0b9-6f5147c782216c6d9410-16d2-4d8b-a086-35c838d1c033eb94349f-30a5-4ba1-92c8-f342104ef0eee49e9089-5360-42af-a051-7666e092525108adb21b-a3ea-45e1-a0c8-b7c88927b07ceb94349f-30a5-4ba1-92c8-f342104ef0eee49e9089-5360-42af-a051-7666e09252511def9c9c-8702-4e60-92a0-d99bf160415aa6188690-0fc3-4e88-9c23-67178330bf6ce49e9089-5360-42af-a051-7666e09252511def9c9c-8702-4e60-92a0-d99bf160415af5b3e1e3-abc6-4e38-bb01-fdec8ff6ff6682363037-a3da-4ddf-8877-ced07ffd52551def9c9c-8702-4e60-92a0-d99bf160415af5b3e1e3-abc6-4e38-bb01-fdec8ff6ff66f82c91c4-cb0c-4e29-9a51-9dc43b9c5fab20597156-f071-4b93-ba3a-d66e8913682bf5b3e1e3-abc6-4e38-bb01-fdec8ff6ff66f82c91c4-cb0c-4e29-9a51-9dc43b9c5fab2a5ead0d-a407-49ef-a840-6e3a16970c4a65ab10f1-c765-4938-a2c3-b222e5c34fbcf82c91c4-cb0c-4e29-9a51-9dc43b9c5fab2a5ead0d-a407-49ef-a840-6e3a16970c4a8d1ad629-ec4f-418e-8ffc-a656a2d264f5248caff1-f76c-4c32-9f36-9c3979b703692a5ead0d-a407-49ef-a840-6e3a16970c4a8d1ad629-ec4f-418e-8ffc-a656a2d264f559368874-b99f-4082-ae21-9695c0b93321d2606062-d4ec-4180-8f3b-3d1e1b0d8fb08d1ad629-ec4f-418e-8ffc-a656a2d264f559368874-b99f-4082-ae21-9695c0b93321699d4f6f-cc92-41c0-8df6-3402b792d8f2a4a8a329-ef28-477b-830f-ca87ddec4ea959368874-b99f-4082-ae21-9695c0b93321699d4f6f-cc92-41c0-8df6-3402b792d8f2699d4f6f-cc92-41c0-8df6-3402b792d8f2940536e2-508d-43c4-ab18-f1e7ed74adc7940536e2-508d-43c4-ab18-f1e7ed74adc74119760b-0c95-4a9f-a0ec-c7dc68b6fe104119760b-0c95-4a9f-a0ec-c7dc68b6fe10a3447de2-79b3-4c11-8883-60f6b681bb6aa3447de2-79b3-4c11-8883-60f6b681bb6a10822134-e9a1-4667-b9c5-685f52ea9eb710822134-e9a1-4667-b9c5-685f52ea9eb7417a80c3-3d71-4cc8-a765-1007d5ddabde417a80c3-3d71-4cc8-a765-1007d5ddabde0d16ae9e-9f2e-4030-be88-b3010dcd55860d16ae9e-9f2e-4030-be88-b3010dcd558674bd9fb1-31a9-49d3-b77e-b11fbbba98fba4a8a329-ef28-477b-830f-ca87ddec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y:26Um-3515m-3515empty:27Gm-3515m-3515empty:28Cm-3515m-3515empty:29Um-3515m-3515empty:30Gm-3515m-3515empty:31Um-3515m-3515empty:32Gm-3515m-3515empty:33Gm-3515m-3515empty:34Um-3515m-3515empty:35Gm-3515m-3515empty:36Gm-3515m-3515empty:37Am-3515empty:38empty:38Gempty:38empty:39empty:39Aempty:39empty:40empty:40Gempty:40empty:41empty:41Gempty:41empty:42empty:42Cempty:42empty:43empty:43Aempty:43empty:44empty:44Uempty:44empty:45empty:45Aempty:45empty:46empty:46Gempty:46empty:47empty:47Aempty:47empty:48empty:48Cempty:48empty:49empty:49Uempty:49empty:50empty:50Cempty:50empty:51empty:51Aempty:51empty:52empty:52Uempty:52empty:53empty:53Gempty:53empty:54empty:54Aempty:54empty:55empty:55Gempty:55empty:56empty:56Uempty:56empty:57empty:57Cempty:57empty:58empty:58Cempty:58empty:59empty:59Aempty:59empty:60empty:60Cempty:60empty:61empty:61Cempty:61empty:62empty:62Aempty:62empty:63empty:63Cempty:63empty:64empty:64Aempty:64empty:65empty:65Aempty:65empty:66empty:66Uempty:66empty:67empty:67Cempty:67empty:68empty:68Gempty:68empty:69empty:69Gempty:69empty:70empty:70Aempty:70empty:71empty:71Uempty:71empty:72empty:72Aempty:72empty:73empty:73Cempty:73empty:74empty:74Uempty:74empty:75empty:75Uempty:75empty:76empty:76Gempty:76empty:77empty:77Cempty:77empty:78empty:78Uempty:78empty:79empty:79Uempty:7910203040506070
ACACUGGAAUGGAAGCCAGGAAUCCUGCUGUGGUGGAGAGGCAUAGACUCAUGAGUCCACCACAAUCGGAUACUUGCUU0500100015002000
RPMMone mismatchno mismatch
ACACUGGAAUGGAAGCCAGGAAUCCUGCUGUGGUGGAGAGGCAUAGACUCAUGAGUCCACCACAAUCGGAUACUUGCUU05k10k15k20k
number of readsone mismatchno mismatch

Genomic context

Gene legend:

References

Authors Journal Year Pubmed link Title
1 Londin et al. Proc. Natl. Acad. Sci. U.S.A. 2015 25713380 Analysis of 13 cell types reveals evidence for the expression of numerous novel primate- and tissue-specific microRNAs.
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