Precursor miRCarta

hsa-6550-5439.1

Accession hsa-6550-5439.1
Organism Homo sapiens
Genome GRCh38.p10
Location 13:32,176,085-32,176,135 (+)
miRNA m-6550
miRNA m-5439
Sequence (5' -> 3')
(51 nts)
AAGGAGAGUUUUAAAGCCCAGGGUCAAGUCUGGGCUCUCGAACUCUCCUCC
MFE -29.10 kcal/mol
first miRCarta version 1.0
last miRCarta version 1.1
Clusters (10 kb)
(3 precursors)
hsa-6550-5439.1
hsa-6033-6227.1
hsa-15597-6227.1

Predicted Structure

ac7b7d2f-d4e9-420c-8ae4-fe33cfa6f030a65998a1-2481-4c9c-8662-fdc567fc9ae6a65998a1-2481-4c9c-8662-fdc567fc9ae65273ebdc-9dfa-4aba-9de1-7dce78eaa17d5273ebdc-9dfa-4aba-9de1-7dce78eaa17dbdc4cafb-00f2-4af6-ae21-96cde971c0d3bdc4cafb-00f2-4af6-ae21-96cde971c0d304c22845-f1db-4fed-a611-2d85105b34b66e157dda-7a1a-4dca-9976-170bfb84e76a86ac7838-cf76-427f-8544-c86c3ff36db804c22845-f1db-4fed-a611-2d85105b34b66e157dda-7a1a-4dca-9976-170bfb84e76a7f7b87cd-5f8e-4bae-9f23-b52f60d22aa24df0a6a2-87e1-48b2-a8d5-81ef596739f56e157dda-7a1a-4dca-9976-170bfb84e76a7f7b87cd-5f8e-4bae-9f23-b52f60d22aa25b416a9e-eb1e-43ba-ad55-1b454107da14b1134649-a106-4ea6-8fcc-d948dc7aa4277f7b87cd-5f8e-4bae-9f23-b52f60d22aa25b416a9e-eb1e-43ba-ad55-1b454107da149937f3c5-a78f-4349-a65f-f2b77d5c83ea4d5386a8-2e26-4f2d-8559-dda1c1c02a7a5b416a9e-eb1e-43ba-ad55-1b454107da149937f3c5-a78f-4349-a65f-f2b77d5c83ea3ac420ff-7755-4bb4-8b4e-3ba2654574dbabdc4d90-0d0b-4d0c-ae30-7109be134a1c9937f3c5-a78f-4349-a65f-f2b77d5c83ea3ac420ff-7755-4bb4-8b4e-3ba2654574dbcfcaa9b8-b9ef-49e3-8c99-628814e92bb4513f0a28-97cb-445a-a481-720aa2e5e5c43ac420ff-7755-4bb4-8b4e-3ba2654574dbcfcaa9b8-b9ef-49e3-8c99-628814e92bb4cfcaa9b8-b9ef-49e3-8c99-628814e92bb401c88b63-c09c-4ed5-8f80-799ee648598f01c88b63-c09c-4ed5-8f80-799ee648598f6cd76ce0-51d5-48d6-9853-33d0edb5e7bd6cd76ce0-51d5-48d6-9853-33d0edb5e7bd4b074e48-d5d1-41f9-8b55-99c76887a2e94b074e48-d5d1-41f9-8b55-99c76887a2e97f106843-ce3f-4088-bb65-f0812d5987f27f106843-ce3f-4088-bb65-f0812d5987f23b0c18d8-5287-4549-ba5e-e37ec5f518f05f1f0fb7-57fd-46ef-bc75-6c8cae497d073d31770c-2c30-4f31-af62-b1f051688dce3b0c18d8-5287-4549-ba5e-e37ec5f518f05f1f0fb7-57fd-46ef-bc75-6c8cae497d07598454eb-6484-46a8-a92d-7b0d4164e172a80f02d3-e203-4e0a-9412-582422903e225f1f0fb7-57fd-46ef-bc75-6c8cae497d07598454eb-6484-46a8-a92d-7b0d4164e1727fe7a93d-2233-49bb-94fd-d31cba788ead6c2aae4e-00e0-4f4b-9db4-0bfb8d44a09b598454eb-6484-46a8-a92d-7b0d4164e1727fe7a93d-2233-49bb-94fd-d31cba788eaddba91125-8709-4206-87f4-c3cdca705d3780c5e03f-1713-469f-91b4-7455b732a3f17fe7a93d-2233-49bb-94fd-d31cba788eaddba91125-8709-4206-87f4-c3cdca705d37f724f0ac-2add-4c60-ad3e-ba257776663fce01c65d-30a5-4df7-96e1-5625c96167d4dba91125-8709-4206-87f4-c3cdca705d37f724f0ac-2add-4c60-ad3e-ba257776663fa1b6c9e2-32b6-49eb-9c66-dc5264aa7cf4a52d3a3a-422c-4e34-a694-4fcdfdb59b66f724f0ac-2add-4c60-ad3e-ba257776663fa1b6c9e2-32b6-49eb-9c66-dc5264aa7cf40385c01f-33f9-4439-949b-90f3afb182aba4f49635-dbe4-413c-927d-47dfc4b25103a1b6c9e2-32b6-49eb-9c66-dc5264aa7cf40385c01f-33f9-4439-949b-90f3afb182abd42d1484-85e3-4517-a71e-185481bd57f9daf03e73-94ff-4593-9622-8ed70fe8bbc70385c01f-33f9-4439-949b-90f3afb182abd42d1484-85e3-4517-a71e-185481bd57f9d90a74e6-af2c-43a4-a848-a159dbf891b5d73789a0-84b3-432d-b74f-17394cc87d0fd42d1484-85e3-4517-a71e-185481bd57f9d90a74e6-af2c-43a4-a848-a159dbf891b5d9a01ef7-315e-4e0f-afad-b2fa9c7601463c2ac1aa-9889-4a72-9dc6-a6384678ee29d90a74e6-af2c-43a4-a848-a159dbf891b5d9a01ef7-315e-4e0f-afad-b2fa9c760146d9a01ef7-315e-4e0f-afad-b2fa9c76014626bd4643-6744-4d35-9d3b-ca328b90961f26bd4643-6744-4d35-9d3b-ca328b90961fab978692-a6da-4d63-969f-ee7efa62cdbbab978692-a6da-4d63-969f-ee7efa62cdbb07a397cd-2527-48bf-abeb-a229ebc7cc57e103ead7-ac5d-4296-a375-164a58d742732ef08154-af95-4bad-a07a-f689220f3a2e07a397cd-2527-48bf-abeb-a229ebc7cc57e103ead7-ac5d-4296-a375-164a58d742739210b9bb-bf36-4fc7-ba95-a188dc48a90c628f0c88-14a5-4696-ae4e-19988b1fb1cae103ead7-ac5d-4296-a375-164a58d742739210b9bb-bf36-4fc7-ba95-a188dc48a90c4426f567-8155-49d3-81b4-6caedca91e174ce08f8a-5ea5-4bee-bd9e-837f2aff49e99210b9bb-bf36-4fc7-ba95-a188dc48a90c4426f567-8155-49d3-81b4-6caedca91e17f038ef41-8493-443d-b931-92bb7fb35b3f0a30f6e5-cc47-4740-b98f-7e1ad4c682e14426f567-8155-49d3-81b4-6caedca91e17f038ef41-8493-443d-b931-92bb7fb35b3fd5978386-1a30-4223-af94-0915d66ea670d7d7b0cf-3f39-49ae-a60c-b3b1b70916b2f038ef41-8493-443d-b931-92bb7fb35b3fd5978386-1a30-4223-af94-0915d66ea6709d12609a-ee53-4702-a925-750f9df549b1aebb64fb-0d50-45e9-a3fe-9bc7ba294556d5978386-1a30-4223-af94-0915d66ea6709d12609a-ee53-4702-a925-750f9df549b1cd61eeb4-d420-44d4-a6eb-339eef23a7186d859d81-0d37-4b75-af81-5a8fd13c58079d12609a-ee53-4702-a925-750f9df549b1cd61eeb4-d420-44d4-a6eb-339eef23a718ec21f95a-a262-4b40-9e64-d03d1e4a13e87a8c2550-a3f4-4ee9-8a49-39e70a3a3132cd61eeb4-d420-44d4-a6eb-339eef23a718ec21f95a-a262-4b40-9e64-d03d1e4a13e8ec21f95a-a262-4b40-9e64-d03d1e4a13e8ca180789-8d58-4ef6-980a-0077075ed2dcca180789-8d58-4ef6-980a-0077075ed2dce16ef3d6-b70e-420c-8e5d-7dc27a067000e16ef3d6-b70e-420c-8e5d-7dc27a06700066ae985f-7e4f-4f68-a8bc-d14d0d26205466ae985f-7e4f-4f68-a8bc-d14d0d26205411eb5840-19bd-4940-915c-15708869643511eb5840-19bd-4940-915c-1570886964352ff50d5e-7700-4c97-8018-329d688e3ca32ff50d5e-7700-4c97-8018-329d688e3ca3929b68e1-7e55-495a-be1b-48e299767aa57a8c2550-a3f4-4ee9-8a49-39e70a3a3132ec21f95a-a262-4b40-9e64-d03d1e4a13e8929b68e1-7e55-495a-be1b-48e299767aa57a8c2550-a3f4-4ee9-8a49-39e70a3a31326d859d81-0d37-4b75-af81-5a8fd13c5807cd61eeb4-d420-44d4-a6eb-339eef23a7187a8c2550-a3f4-4ee9-8a49-39e70a3a31326d859d81-0d37-4b75-af81-5a8fd13c5807aebb64fb-0d50-45e9-a3fe-9bc7ba2945569d12609a-ee53-4702-a925-750f9df549b16d859d81-0d37-4b75-af81-5a8fd13c5807aebb64fb-0d50-45e9-a3fe-9bc7ba294556d7d7b0cf-3f39-49ae-a60c-b3b1b70916b2d5978386-1a30-4223-af94-0915d66ea670aebb64fb-0d50-45e9-a3fe-9bc7ba294556d7d7b0cf-3f39-49ae-a60c-b3b1b70916b20a30f6e5-cc47-4740-b98f-7e1ad4c682e1f038ef41-8493-443d-b931-92bb7fb35b3fd7d7b0cf-3f39-49ae-a60c-b3b1b70916b20a30f6e5-cc47-4740-b98f-7e1ad4c682e14ce08f8a-5ea5-4bee-bd9e-837f2aff49e94426f567-8155-49d3-81b4-6caedca91e170a30f6e5-cc47-4740-b98f-7e1ad4c682e14ce08f8a-5ea5-4bee-bd9e-837f2aff49e9628f0c88-14a5-4696-ae4e-19988b1fb1ca9210b9bb-bf36-4fc7-ba95-a188dc48a90c4ce08f8a-5ea5-4bee-bd9e-837f2aff49e9628f0c88-14a5-4696-ae4e-19988b1fb1ca2ef08154-af95-4bad-a07a-f689220f3a2ee103ead7-ac5d-4296-a375-164a58d74273628f0c88-14a5-4696-ae4e-19988b1fb1ca2ef08154-af95-4bad-a07a-f689220f3a2e2ef08154-af95-4bad-a07a-f689220f3a2ec4ba2639-78ae-4cf6-a1cf-072084e9daecc4ba2639-78ae-4cf6-a1cf-072084e9daec85d3fa10-c7fd-46c4-bd66-298896acc6ae85d3fa10-c7fd-46c4-bd66-298896acc6ae6c2252c2-9094-4d0c-96f2-eb5bacf6f5c63c2ac1aa-9889-4a72-9dc6-a6384678ee29d9a01ef7-315e-4e0f-afad-b2fa9c7601466c2252c2-9094-4d0c-96f2-eb5bacf6f5c63c2ac1aa-9889-4a72-9dc6-a6384678ee29d73789a0-84b3-432d-b74f-17394cc87d0fd90a74e6-af2c-43a4-a848-a159dbf891b53c2ac1aa-9889-4a72-9dc6-a6384678ee29d73789a0-84b3-432d-b74f-17394cc87d0fdaf03e73-94ff-4593-9622-8ed70fe8bbc7d42d1484-85e3-4517-a71e-185481bd57f9d73789a0-84b3-432d-b74f-17394cc87d0fdaf03e73-94ff-4593-9622-8ed70fe8bbc7a4f49635-dbe4-413c-927d-47dfc4b251030385c01f-33f9-4439-949b-90f3afb182abdaf03e73-94ff-4593-9622-8ed70fe8bbc7a4f49635-dbe4-413c-927d-47dfc4b25103a52d3a3a-422c-4e34-a694-4fcdfdb59b66a1b6c9e2-32b6-49eb-9c66-dc5264aa7cf4a4f49635-dbe4-413c-927d-47dfc4b25103a52d3a3a-422c-4e34-a694-4fcdfdb59b66ce01c65d-30a5-4df7-96e1-5625c96167d4f724f0ac-2add-4c60-ad3e-ba257776663fa52d3a3a-422c-4e34-a694-4fcdfdb59b66ce01c65d-30a5-4df7-96e1-5625c96167d480c5e03f-1713-469f-91b4-7455b732a3f1dba91125-8709-4206-87f4-c3cdca705d37ce01c65d-30a5-4df7-96e1-5625c96167d480c5e03f-1713-469f-91b4-7455b732a3f16c2aae4e-00e0-4f4b-9db4-0bfb8d44a09b7fe7a93d-2233-49bb-94fd-d31cba788ead80c5e03f-1713-469f-91b4-7455b732a3f16c2aae4e-00e0-4f4b-9db4-0bfb8d44a09ba80f02d3-e203-4e0a-9412-582422903e22598454eb-6484-46a8-a92d-7b0d4164e1726c2aae4e-00e0-4f4b-9db4-0bfb8d44a09ba80f02d3-e203-4e0a-9412-582422903e223d31770c-2c30-4f31-af62-b1f051688dce5f1f0fb7-57fd-46ef-bc75-6c8cae497d07a80f02d3-e203-4e0a-9412-582422903e223d31770c-2c30-4f31-af62-b1f051688dce3d31770c-2c30-4f31-af62-b1f051688dce4030d20c-dedb-4bd8-a852-e64223b3e3d94030d20c-dedb-4bd8-a852-e64223b3e3d9572f5454-657b-4b89-9040-c1de9d968a0c572f5454-657b-4b89-9040-c1de9d968a0cd54ec3b4-75db-4413-ba96-6242d9ecf591d54ec3b4-75db-4413-ba96-6242d9ecf59185b97fa5-97f5-418b-a635-53621928d31185b97fa5-97f5-418b-a635-53621928d3118f4e5f25-1076-43c7-b8e9-8ba3d4d5e6828f4e5f25-1076-43c7-b8e9-8ba3d4d5e68261768367-a545-4fb5-8a10-67906219ab69513f0a28-97cb-445a-a481-720aa2e5e5c4cfcaa9b8-b9ef-49e3-8c99-628814e92bb461768367-a545-4fb5-8a10-67906219ab69513f0a28-97cb-445a-a481-720aa2e5e5c4abdc4d90-0d0b-4d0c-ae30-7109be134a1c3ac420ff-7755-4bb4-8b4e-3ba2654574db513f0a28-97cb-445a-a481-720aa2e5e5c4abdc4d90-0d0b-4d0c-ae30-7109be134a1cabdc4d90-0d0b-4d0c-ae30-7109be134a1caf6ad32a-ede2-448d-82dc-12d99aa51a7daf6ad32a-ede2-448d-82dc-12d99aa51a7d126270c7-d3fa-4b6b-a93f-9187d86d5088126270c7-d3fa-4b6b-a93f-9187d86d50885916934f-5660-4ce8-813a-66b36263e9924d5386a8-2e26-4f2d-8559-dda1c1c02a7a9937f3c5-a78f-4349-a65f-f2b77d5c83ea5916934f-5660-4ce8-813a-66b36263e9924d5386a8-2e26-4f2d-8559-dda1c1c02a7ab1134649-a106-4ea6-8fcc-d948dc7aa4275b416a9e-eb1e-43ba-ad55-1b454107da144d5386a8-2e26-4f2d-8559-dda1c1c02a7ab1134649-a106-4ea6-8fcc-d948dc7aa4274df0a6a2-87e1-48b2-a8d5-81ef596739f57f7b87cd-5f8e-4bae-9f23-b52f60d22aa2b1134649-a106-4ea6-8fcc-d948dc7aa4274df0a6a2-87e1-48b2-a8d5-81ef596739f586ac7838-cf76-427f-8544-c86c3ff36db86e157dda-7a1a-4dca-9976-170bfb84e76a4df0a6a2-87e1-48b2-a8d5-81ef596739f586ac7838-cf76-427f-8544-c86c3ff36db886ac7838-cf76-427f-8544-c86c3ff36db897022412-0ed8-41ef-81cb-ad40fceb441897022412-0ed8-41ef-81cb-ad40fceb441807fe0cf2-f275-400b-aec3-62a0085bde263ac420ff-7755-4bb4-8b4e-3ba2654574db8c455f81-3d9c-4a3d-957e-ce6eeb583ecfdba91125-8709-4206-87f4-c3cdca705d37d33d6a43-621a-4b6f-8bd1-267fd1b0ee88e103ead7-ac5d-4296-a375-164a58d74273400fcd98-270b-4312-8320-8dae50e24efb66ae985f-7e4f-4f68-a8bc-d14d0d262054b7a165f8-9478-4b32-ac60-7353fd6f8971628f0c88-14a5-4696-ae4e-19988b1fb1ca6f79b948-8f05-4b97-8140-f927a01fba25ce01c65d-30a5-4df7-96e1-5625c96167d4ead04f80-f7ae-4610-a98e-54173dfc3d1b61768367-a545-4fb5-8a10-67906219ab694782c331-825b-4098-a4dd-facb9a50c74997022412-0ed8-41ef-81cb-ad40fceb441892b0a944-1d53-43f3-ae09-3b2329aff034empty:1empty:1Uempty:1empty:2empty:2Cempty:2empty:3empty:3Cempty:3empty:4empty:4Aempty:4empty:5empty:5Cempty:5empty:6empty:6Aempty:6empty:7empty:7Gempty:7empty:8empty:8Uempty:8empty:9empty:9Cempty:9empty:10empty:10Aempty:10empty:11empty:11Cempty:11empty:12empty:12Aempty:12empty:13empty:13Cempty:13empty:14empty:14Aempty:14empty:15empty:15Aempty:15m-6550empty:16Am-6550m-6550empty:17Am-6550m-6550empty:18Gm-6550m-6550empty:19Gm-6550m-6550empty:20Am-6550m-6550empty:21Gm-6550m-6550empty:22Am-6550m-6550empty:23Gm-6550m-6550empty:24Um-6550m-6550empty:25Um-6550m-6550empty:26Um-6550m-6550empty:27Um-6550m-6550empty:28Am-6550m-6550empty:29Am-6550m-6550empty:30Am-6550m-6550empty:31Gm-6550m-6550empty:32Cm-6550m-6550empty:33Cm-6550m-6550empty:34Cm-6550m-6550empty:35Am-6550m-6550empty:36Gm-6550m-6550empty:37Gm-6550empty:38empty:38Gempty:38empty:39empty:39Uempty:39empty:40empty:40Cempty:40empty:41empty:41Aempty:41empty:42empty:42Aempty:42empty:43empty:43Gempty:43empty:44empty:44Uempty:44empty:45empty:45Cempty:45m-5439empty:46Um-5439m-5439empty:47Gm-5439m-5439empty:48Gm-5439m-5439empty:49Gm-5439m-5439empty:50Cm-5439m-5439empty:51Um-5439m-5439empty:52Cm-5439m-5439empty:53Um-5439m-5439empty:54Cm-5439m-5439empty:55Gm-5439m-5439empty:56Am-5439m-5439empty:57Am-5439m-5439empty:58Cm-5439m-5439empty:59Um-5439m-5439empty:60Cm-5439m-5439empty:61Um-5439m-5439empty:62Cm-5439m-5439empty:63Cm-5439m-5439empty:64Um-5439m-5439empty:65Cm-5439m-5439empty:66Cm-5439empty:67empty:67Cempty:67empty:68empty:68Cempty:68empty:69empty:69Aempty:69empty:70empty:70Gempty:70empty:71empty:71Gempty:71empty:72empty:72Uempty:72empty:73empty:73Uempty:73empty:74empty:74Uempty:74empty:75empty:75Gempty:75empty:76empty:76Gempty:76empty:77empty:77Aempty:77empty:78empty:78Cempty:78empty:79empty:79Uempty:79empty:80empty:80Cempty:80empty:81empty:81Uempty:811020304050607080
UCCACAGUCACACAAAAGGAGAGUUUUAAAGCCCAGGGUCAAGUCUGGGCUCUCGAACUCUCCUCCCCAGGUUUGGACUCU0200400
RPMMone mismatchno mismatch
UCCACAGUCACACAAAAGGAGAGUUUUAAAGCCCAGGGUCAAGUCUGGGCUCUCGAACUCUCCUCCCCAGGUUUGGACUCU05001000
number of readsone mismatchno mismatch

Genomic context

Gene legend:

References

Authors Journal Year Pubmed link Title
1 Backes et al. Nucleic Acids Res. 2016 26635395 Prioritizing and selecting likely novel miRNAs from NGS data.
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