Precursor miRCarta

hsa-5815-5860.1

Accession hsa-5815-5860.1
Organism Homo sapiens
Genome GRCh38.p10
Location 15:74,611,073-74,611,137 (+)
miRNA m-5815
miRNA m-5860
Sequence (5' -> 3')
(65 nts)
CUGGGGGGCCACAGGGACCCUGGCCCUUCCUUCACCUCCAGCAGUGUCCCUAGCCACCCCCAGCA
MFE -27.50 kcal/mol
first miRCarta version 1.0
last miRCarta version 1.1
Clusters (10 kb)
(7 precursors)
hsa-9564-18871.1
hsa-6162-6204.1
hsa-4855-4331.1
hsa-5815-5860.1
hsa-21041-14111.1
hsa-12087-16212.1
hsa-3959-3970.1

Predicted Structure

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UCCCUCAGAUUCUCCCUGGGGGGCCACAGGGACCCUGGCCCUUCCUUCACCUCCAGCAGUGUCCCUAGCCACCCCCAGCAUAUGCCUCUCAGGCA02040
RPMMone mismatchno mismatch
UCCCUCAGAUUCUCCCUGGGGGGCCACAGGGACCCUGGCCCUUCCUUCACCUCCAGCAGUGUCCCUAGCCACCCCCAGCAUAUGCCUCUCAGGCA0200400600
number of readsone mismatchno mismatch

Genomic context

Gene legend:

References

Authors Journal Year Pubmed link Title
1 Backes et al. Nucleic Acids Res. 2016 26635395 Prioritizing and selecting likely novel miRNAs from NGS data.
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