Precursor miRBase

tgu-mir-200b (MI0013820)

Accession MI0013820
Name tgu-mir-200b
similar to following miRCarta precursors tgu-35943-26067.1
Organism Taeniopygia guttata
Genome taeGut3.2.4
Location chr21:5,892,896-5,892,968 (+)
miRNA tgu-miR-200b-5p
miRNA tgu-miR-200b-3p
Sequence (5' -> 3')
(73 nts)
CAGCAUCUUACUGGGCAGCAUUGGAUGAUCCAUGCCGCUCUAAUACUGCCUGGUAAUGAUGAUGAAGGCUCUU
MFE -26.40 kcal/mol
first miRBase version 15.0
last miRBase version 21.0
Clusters (10 kb)
(2 precursors)
tgu-mir-200b
tgu-mir-200a
Family mir-8 (MIPF0000019)
Experiments
experiment Pubmed link
Illumina 23268654
454 20360741

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Warren et al. Nature 2010 20360741 The genome of a songbird.
2 Luo et al. BMC Genomics 2012 23268654 Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression.