Precursor miRBase

rno-mir-544 (MI0012593)

Accession MI0012593
Name rno-mir-544
similar to following miRCarta precursors rno-29553-25243.1
Organism Rattus norvegicus
Genome Rnor_5.0
Location chr6:143,041,526-143,041,603 (+)
miRNA rno-miR-544-5p
miRNA rno-miR-544-3p
Sequence (5' -> 3')
(78 nts)
CACCUAGGGAUCUUGUUAAAAAGCAGAUUCUGAUUGAGGGACCAAGAUUCUGCAUUUUUAGCAAGCUCUCAAGUGAUG
MFE -27.00 kcal/mol
first miRBase version 14.0
last miRBase version 21.0
Clusters (10 kb)
(18 precursors)
rno-mir-667
rno-mir-376c
rno-mir-376b
rno-mir-3595
rno-mir-376a
rno-mir-300
rno-mir-381
rno-mir-487b
rno-mir-3576
rno-mir-539
rno-mir-6331
rno-mir-544
rno-mir-3592
rno-mir-382
rno-mir-134
rno-mir-668
rno-mir-485
rno-mir-154
Family mir-544 (MIPF0000436)
Experiments
experiment Pubmed link
SOLiD 20403161
External DBs
Gene symbol Mir544
NCBI Gene 100314128

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Artzi et al. BMC Bioinformatics 2008 18215311 miRNAminer: a tool for homologous microRNA gene search.
2 Linsen et al. BMC Genomics 2010 20403161 Small RNA expression and strain specificity in the rat.