Precursor miRBase

ssc-let-7f-1 (MI0002446)

Accession MI0002446
Name ssc-let-7f-1
similar to following miRCarta precursors ssc-19.1
potential naming conflicts with ssc-let-7f (MIMAT0002152)
Organism Sus scrofa
Genome Sscrofa10.2
Location chrX:51,801,728-51,801,810 (-)
miRNA ssc-let-7f
Sequence (5' -> 3')
(83 nts)
UGUGGGAUGAGGUAGUAGAUUGUAUAGUUUUAGGGUCAUACCCCAUCUUGGAGAUAACUAUACAGUCUACUGUCUUUCCCACG
MFE -39.00 kcal/mol
first miRBase version 7.0
last miRBase version 21.0
Clusters (10 kb)
(2 precursors)
ssc-mir-98
ssc-let-7f-1
Family let-7 (MIPF0000002)
Experiments
experiment Pubmed link
Illumina 21312241 24499489
cloned 20180025
External DBs
Gene symbol MIRLET7F-1
NCBI Gene 100316608

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Wernersson et al. BMC Genomics 2005 15885146 Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing.
2 Cho et al. Mol. Biol. Rep. 2010 20180025 Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue.
3 Li et al. J. Cell. Biochem. 2011 21312241 MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing.
4 Chen et al. BMC Genomics 2014 24499489 Exploration of microRNAs in porcine milk exosomes.