Precursor miRBase

mmu-mir-379 (MI0000796)

Accession MI0000796
Name mmu-mir-379
similar to following miRCarta precursors mmu-101-645.1
Organism Mus musculus
Genome GRCm38.p5
Location chr12:109,709,060-109,709,125 (+)
miRNA mmu-miR-379-5p
miRNA mmu-miR-379-3p
Sequence (5' -> 3')
(66 nts)
AGAGAUGGUAGACUAUGGAACGUAGGCGUUAUGUUUUUGACCUAUGUAACAUGGUCCACUAACUCU
MFE -27.10 kcal/mol
first miRBase version 5.1
last miRBase version 21.0
Clusters (10 kb)
(15 precursors)
mmu-mir-379
mmu-mir-411
mmu-mir-299a
mmu-mir-299b
mmu-mir-380
mmu-mir-1197
mmu-mir-323
mmu-mir-758
mmu-mir-329
mmu-mir-494
mmu-mir-679
mmu-mir-1193
mmu-mir-666
mmu-mir-543
mmu-mir-495
Family mir-379 (MIPF0000126)
Experiments
experiment Pubmed link
Illumina 20413612
454 20668074
External DBs
Gene symbol Mir379
NCBI Gene 723858

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Poy et al. Nature 2004 15538371 A pancreatic islet-specific microRNA regulates insulin secretion.
2 Sewer et al. BMC Bioinformatics 2005 16274478 Identification of clustered microRNAs using an ab initio prediction method.
3 Watanabe et al. Genes Dev. 2006 16766679 Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes.
4 Landgraf et al. Cell 2007 17604727 A mammalian microRNA expression atlas based on small RNA library sequencing.
5 Zhu et al. J. Virol. 2010 20668074 Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68.
6 Chiang et al. Genes Dev. 2010 20413612 Mammalian microRNAs: experimental evaluation of novel and previously annotated genes.
7 Ahn et al. Mol. Hum. Reprod. 2010 20215419 MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing.