Precursor miRBase

tch-mir-539 (MI0031162)

Accession MI0031162
Name tch-mir-539
similar to following miRCarta precursors tch-691.1
Organism Tupaia chinensis
Genome TupChi_1.0
Location KB321140.1:4,907,685-4,907,744 (+)
miRNA tch-miR-539-3p
Sequence (5' -> 3')
(60 nts)
AGAGAUUGUCCUCGGUGUGUUCGCUUUAUUUAUGAUGAAUCAUACAAGGACAAUUUCUUU
MFE -21.80 kcal/mol
first miRBase version 21.0
last miRBase version 21.0
Clusters (10 kb)
(6 precursors)
tch-mir-376c
tch-mir-376a-1
tch-mir-376b
tch-mir-376a-2
tch-mir-381
tch-mir-539
Family mir-154 (MIPF0000018)
Experiments
experiment Pubmed link
Illumina 24314655
External DBs
Gene symbol MIR539
NCBI Gene 104796600

Predicted Structure

c8cf91ef-bb0f-411d-be01-0018b32fca1619c53ea5-5db9-4b0f-bd76-6bf9fb69562e33549be2-ca55-441b-8da3-d6db88299ad8ac0a6448-759b-4d49-9628-da3acc06ce9dc8cf91ef-bb0f-411d-be01-0018b32fca1633549be2-ca55-441b-8da3-d6db88299ad88ae42856-daf8-4f8f-ac19-7d8854906ce7ab732730-389e-4e75-b944-0826e37608b233549be2-ca55-441b-8da3-d6db88299ad88ae42856-daf8-4f8f-ac19-7d8854906ce75e5526a8-a92a-4da4-9396-cda0d7ab2e2a7d6c1a0b-49ea-4355-bb9c-1dd92ccea4268ae42856-daf8-4f8f-ac19-7d8854906ce75e5526a8-a92a-4da4-9396-cda0d7ab2e2a89baf61e-fb39-4ae6-a024-92d878c6878b9bf6688f-c183-4764-88f4-10f249cf69e45e5526a8-a92a-4da4-9396-cda0d7ab2e2a89baf61e-fb39-4ae6-a024-92d878c6878b47dfb0f8-f191-4d75-b214-cf961a73872c34b6d783-4f76-4b90-81f5-1119f719d5aa89baf61e-fb39-4ae6-a024-92d878c6878b47dfb0f8-f191-4d75-b214-cf961a73872c70f880e9-e870-40db-9e83-c5207a2dea6953a1d759-b2bc-4711-a851-60cd2dd022a147dfb0f8-f191-4d75-b214-cf961a73872c70f880e9-e870-40db-9e83-c5207a2dea69a5d62757-c61c-4890-ae17-b9272c587f2044a3411f-7ebd-49f5-ac5a-b9e71ae6550170f880e9-e870-40db-9e83-c5207a2dea69a5d62757-c61c-4890-ae17-b9272c587f2028b44af2-e529-4be1-b587-861c95968b87ee6e9a5d-2163-4aad-8308-c3d5ace91b45a5d62757-c61c-4890-ae17-b9272c587f2028b44af2-e529-4be1-b587-861c95968b87adfcc3b8-97f2-4e0f-8693-1c08d90adbc8363c15dc-7396-463d-9fbf-fbf2e23d7c2a28b44af2-e529-4be1-b587-861c95968b87adfcc3b8-97f2-4e0f-8693-1c08d90adbc8fd705b6f-98c0-4a27-a89c-336b505083ba25624189-ab71-45c1-8bbb-b69d602ec5a0adfcc3b8-97f2-4e0f-8693-1c08d90adbc8fd705b6f-98c0-4a27-a89c-336b505083ba4dc96447-2c6a-4563-85d2-9128e4f8255365cc79fb-b68e-4cc6-9eed-cd6f0b7e3ab4fd705b6f-98c0-4a27-a89c-336b505083ba4dc96447-2c6a-4563-85d2-9128e4f825534dc96447-2c6a-4563-85d2-9128e4f825530c835993-3840-4b80-b5a0-824a3f0565630c835993-3840-4b80-b5a0-824a3f056563d7d3d46d-f02e-495d-bd6a-bc966999febf74aeb0ab-5da1-45bb-8e8d-8254f49ad4a957be4960-f62c-45bd-a5d5-12ec4949efbdd7d3d46d-f02e-495d-bd6a-bc966999febf74aeb0ab-5da1-45bb-8e8d-8254f49ad4a9eda6bef4-5196-4b94-b3fd-296b33d0f8c24183cf98-47c6-454c-8f52-1ada5e9dfc1374aeb0ab-5da1-45bb-8e8d-8254f49ad4a9eda6bef4-5196-4b94-b3fd-296b33d0f8c2d573d687-423d-4cee-96aa-bdb1647f8d84cd1ba029-f493-44af-9fd2-0c61808df307eda6bef4-5196-4b94-b3fd-296b33d0f8c2d573d687-423d-4cee-96aa-bdb1647f8d84b792b6a8-c08b-4856-baeb-870a945ee98e6976bead-523f-42d3-af9e-1c0232cc469dd573d687-423d-4cee-96aa-bdb1647f8d84b792b6a8-c08b-4856-baeb-870a945ee98e651fce59-e769-4d04-9bbd-4f67d819a068d7ca9a7d-2c34-401f-a060-831de62012a5b792b6a8-c08b-4856-baeb-870a945ee98e651fce59-e769-4d04-9bbd-4f67d819a06893dddfef-ab18-4398-870b-13039a3a62ddca73136d-4615-41ca-9b6b-e3d371cdf793651fce59-e769-4d04-9bbd-4f67d819a06893dddfef-ab18-4398-870b-13039a3a62dde33c325a-3d4f-41ce-b53e-2d8d84789d300d7544bb-e11f-4741-b4d1-377fbc74682293dddfef-ab18-4398-870b-13039a3a62dde33c325a-3d4f-41ce-b53e-2d8d84789d30202430b9-1484-4ace-982f-87103191c90a83579663-9e6d-4055-84b6-e6fa5d9ba7e8e33c325a-3d4f-41ce-b53e-2d8d84789d30202430b9-1484-4ace-982f-87103191c90a8181d39b-6fa5-4d97-8788-594071652f9d5bf9347c-84fa-4a33-a935-070bf273601c202430b9-1484-4ace-982f-87103191c90a8181d39b-6fa5-4d97-8788-594071652f9d8181d39b-6fa5-4d97-8788-594071652f9d5325d4b0-c3ab-4e34-b424-23ff292a3990cd5c7967-c52c-4f23-b002-3a4a04b8fa343bfdbc8e-c264-40bc-96c5-62ec269482eb5325d4b0-c3ab-4e34-b424-23ff292a3990cd5c7967-c52c-4f23-b002-3a4a04b8fa3459ab6126-6f2b-45a8-a631-48037e8786f2acfb1820-0dd4-4989-8676-0f6ef42c432fcd5c7967-c52c-4f23-b002-3a4a04b8fa3459ab6126-6f2b-45a8-a631-48037e8786f259ab6126-6f2b-45a8-a631-48037e8786f205e68fd8-c799-4f3a-a4af-6ffcb391d5a205e68fd8-c799-4f3a-a4af-6ffcb391d5a2af0f11b4-ae22-4965-8eac-3aa7ae4558e2af0f11b4-ae22-4965-8eac-3aa7ae4558e2362d57c0-36ac-40ab-844e-2f72d24cd0a3362d57c0-36ac-40ab-844e-2f72d24cd0a37e13fcc7-2951-4581-9037-3fbb5c746e2a7e13fcc7-2951-4581-9037-3fbb5c746e2abb8a0dd3-a9f7-43ad-9e5b-285884abc2dbbb8a0dd3-a9f7-43ad-9e5b-285884abc2db6b726e8d-2ba8-44bd-be77-4251ff3b3b766b726e8d-2ba8-44bd-be77-4251ff3b3b764432bed9-8a73-4ef9-91b7-c2f1657f7471acfb1820-0dd4-4989-8676-0f6ef42c432f59ab6126-6f2b-45a8-a631-48037e8786f24432bed9-8a73-4ef9-91b7-c2f1657f7471acfb1820-0dd4-4989-8676-0f6ef42c432f3bfdbc8e-c264-40bc-96c5-62ec269482ebcd5c7967-c52c-4f23-b002-3a4a04b8fa34acfb1820-0dd4-4989-8676-0f6ef42c432f3bfdbc8e-c264-40bc-96c5-62ec269482eb5bf9347c-84fa-4a33-a935-070bf273601c8181d39b-6fa5-4d97-8788-594071652f9d3bfdbc8e-c264-40bc-96c5-62ec269482eb5bf9347c-84fa-4a33-a935-070bf273601c83579663-9e6d-4055-84b6-e6fa5d9ba7e8202430b9-1484-4ace-982f-87103191c90a5bf9347c-84fa-4a33-a935-070bf273601c83579663-9e6d-4055-84b6-e6fa5d9ba7e80d7544bb-e11f-4741-b4d1-377fbc746822e33c325a-3d4f-41ce-b53e-2d8d84789d3083579663-9e6d-4055-84b6-e6fa5d9ba7e80d7544bb-e11f-4741-b4d1-377fbc746822ca73136d-4615-41ca-9b6b-e3d371cdf79393dddfef-ab18-4398-870b-13039a3a62dd0d7544bb-e11f-4741-b4d1-377fbc746822ca73136d-4615-41ca-9b6b-e3d371cdf793ca73136d-4615-41ca-9b6b-e3d371cdf7932a9345ae-b175-42ce-a16a-b256d000c4dbd7ca9a7d-2c34-401f-a060-831de62012a5651fce59-e769-4d04-9bbd-4f67d819a0682a9345ae-b175-42ce-a16a-b256d000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References

Authors Journal Year Pubmed link Title
1 Xu et al. Virology 2014 24314655 microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture.
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