Precursor miRBase

tch-mir-539 (MI0031162)

Accession MI0031162
Name tch-mir-539
similar to following miRCarta precursors tch-691.1
Organism Tupaia chinensis
Genome TupChi_1.0
Location KB321140.1:4,907,685-4,907,744 (+)
miRNA tch-miR-539-3p
Sequence (5' -> 3')
(60 nts)
AGAGAUUGUCCUCGGUGUGUUCGCUUUAUUUAUGAUGAAUCAUACAAGGACAAUUUCUUU
MFE -21.80 kcal/mol
first miRBase version 21.0
last miRBase version 21.0
Clusters (10 kb)
(6 precursors)
tch-mir-376c
tch-mir-376a-1
tch-mir-376b
tch-mir-376a-2
tch-mir-381
tch-mir-539
Family mir-154 (MIPF0000018)
Experiments
experiment Pubmed link
Illumina 24314655
External DBs
Gene symbol MIR539
NCBI Gene 104796600

Predicted Structure

a7a3b2d4-f738-485f-afef-41a3f1f36fcc8ead16a6-282e-49ab-b48b-f6b4808207121782d6f9-1de4-457b-8d53-571355c22484ae8ab133-77b5-4cbb-b1e4-28279db271c8a7a3b2d4-f738-485f-afef-41a3f1f36fcc1782d6f9-1de4-457b-8d53-571355c224847982fd46-b614-4db5-9768-ba533f8ccfbd15f2cf5b-6f41-4931-835b-84d84ca02d591782d6f9-1de4-457b-8d53-571355c224847982fd46-b614-4db5-9768-ba533f8ccfbd08ddde88-59a8-47be-821d-d3a3c9570f71707cf64c-cbfc-4ee0-bac9-17f71446e2207982fd46-b614-4db5-9768-ba533f8ccfbd08ddde88-59a8-47be-821d-d3a3c9570f71b98a305f-622a-4b8b-bbe5-069c8822995215bb0d6c-9ee1-4aff-9227-33adc81c85fe08ddde88-59a8-47be-821d-d3a3c9570f71b98a305f-622a-4b8b-bbe5-069c8822995231f26cb8-c4ab-4e34-b19c-77a2dcfa999491c0adb2-f44d-4dad-8360-b0fefae8453eb98a305f-622a-4b8b-bbe5-069c8822995231f26cb8-c4ab-4e34-b19c-77a2dcfa9994ad28170d-50e0-4318-b2d6-67201951309bc83b43e9-f769-4df6-8aec-0b3189f6941231f26cb8-c4ab-4e34-b19c-77a2dcfa9994ad28170d-50e0-4318-b2d6-67201951309bc571906a-58ad-4897-96aa-48632182ed107c005cc4-6fc0-4742-babb-bb08e4a40576ad28170d-50e0-4318-b2d6-67201951309bc571906a-58ad-4897-96aa-48632182ed10d53f9d9d-5f6b-4848-8b81-042d6f1b9e9015921b66-8370-4ca7-8416-f06c62dc8f48c571906a-58ad-4897-96aa-48632182ed10d53f9d9d-5f6b-4848-8b81-042d6f1b9e9020e0a3bb-3fb2-4b11-af30-0747a290abe9b8f58ad8-987a-45f6-a981-441a81d41acfd53f9d9d-5f6b-4848-8b81-042d6f1b9e9020e0a3bb-3fb2-4b11-af30-0747a290abe9705212c9-1dcb-4654-a617-764ad85a9aab60a18599-be5d-4639-8908-f4005248ccfb20e0a3bb-3fb2-4b11-af30-0747a290abe9705212c9-1dcb-4654-a617-764ad85a9aab14d14c9b-9d9c-4342-b8b0-6ee09e8d4205bacdb0d2-8e09-4568-8622-ace0ec525aec705212c9-1dcb-4654-a617-764ad85a9aab14d14c9b-9d9c-4342-b8b0-6ee09e8d420514d14c9b-9d9c-4342-b8b0-6ee09e8d420531e15fa0-2d58-468f-bc8c-cf8087f3fc0131e15fa0-2d58-468f-bc8c-cf8087f3fc018fd3074a-2979-4ecf-953a-a9186e092f3d6404f860-3af3-43bc-8ecd-2b485c9b77f86fa94762-cbc3-45a6-aee2-de42bc90f80f8fd3074a-2979-4ecf-953a-a9186e092f3d6404f860-3af3-43bc-8ecd-2b485c9b77f8135f2a53-447a-4b8b-82e8-5e37c65ede3394b62bac-5a02-4f02-96f2-e6e9b0738df46404f860-3af3-43bc-8ecd-2b485c9b77f8135f2a53-447a-4b8b-82e8-5e37c65ede3316b4e552-8afe-4d33-91af-7d76487d1918a14a2b0b-8a02-4273-84c0-845bfa5a11ce135f2a53-447a-4b8b-82e8-5e37c65ede3316b4e552-8afe-4d33-91af-7d76487d1918bc9f5ff8-6148-4576-9df7-f6b6c4e2c5cfe760588c-4ef7-444d-a5fd-1902f051699b16b4e552-8afe-4d33-91af-7d76487d1918bc9f5ff8-6148-4576-9df7-f6b6c4e2c5cfff34e809-33e8-4606-9296-56a52cafc955973539cd-fb20-4a90-9809-348a108dc510bc9f5ff8-6148-4576-9df7-f6b6c4e2c5cfff34e809-33e8-4606-9296-56a52cafc95509636fa8-b0f3-4c1f-af91-108d3470bf4e8df395b6-df8d-41e7-b94f-afbfd8990075ff34e809-33e8-4606-9296-56a52cafc95509636fa8-b0f3-4c1f-af91-108d3470bf4e8e1aff8d-1217-4fcc-bf9c-1570c066081f906aa287-01b2-45d6-9596-d8a12c591d2509636fa8-b0f3-4c1f-af91-108d3470bf4e8e1aff8d-1217-4fcc-bf9c-1570c066081f89f64939-2ebc-4cce-bb27-3b9d08f3789764033dc7-04b9-4171-a62f-b7ec8723ae4f8e1aff8d-1217-4fcc-bf9c-1570c066081f89f64939-2ebc-4cce-bb27-3b9d08f37897a1046f14-9c07-42d7-b2b8-667f9174338bf88bae8c-118e-45ca-9c49-79f540da5c4589f64939-2ebc-4cce-bb27-3b9d08f37897a1046f14-9c07-42d7-b2b8-667f9174338ba1046f14-9c07-42d7-b2b8-667f9174338b97f8598a-7849-4491-aa44-d3c9e5489bd297eec6c8-3bdd-41c8-9e14-c4c9603ef07088c56a0e-28b3-4449-b51a-9dcab962d94f97f8598a-7849-4491-aa44-d3c9e5489bd297eec6c8-3bdd-41c8-9e14-c4c9603ef070ce61c84a-545f-4e85-a74e-b1f347dd0ffadb504daa-3105-4e21-ac40-67bde131fdb897eec6c8-3bdd-41c8-9e14-c4c9603ef070ce61c84a-545f-4e85-a74e-b1f347dd0fface61c84a-545f-4e85-a74e-b1f347dd0ffa93f16696-537d-4511-9f5c-f2210394f93293f16696-537d-4511-9f5c-f2210394f932b0d45483-a40b-47b8-a83c-2b806bc1651eb0d45483-a40b-47b8-a83c-2b806bc1651ec16aeb46-6e0b-41a9-9286-c4db27ea7c5fc16aeb46-6e0b-41a9-9286-c4db27ea7c5f862a396b-21ee-4fbd-8b93-49e67eb4c9dd862a396b-21ee-4fbd-8b93-49e67eb4c9dd6082151c-b55f-447e-add6-b5e51dec04436082151c-b55f-447e-add6-b5e51dec0443d075be30-e185-464a-93c7-a1dd32c7fc4dd075be30-e185-464a-93c7-a1dd32c7fc4daf24aeb2-7ea2-40b7-b74c-b7f94825290edb504daa-3105-4e21-ac40-67bde131fdb8ce61c84a-545f-4e85-a74e-b1f347dd0ffaaf24aeb2-7ea2-40b7-b74c-b7f94825290edb504daa-3105-4e21-ac40-67bde131fdb888c56a0e-28b3-4449-b51a-9dcab962d94f97eec6c8-3bdd-41c8-9e14-c4c9603ef070db504daa-3105-4e21-ac40-67bde131fdb888c56a0e-28b3-4449-b51a-9dcab962d94ff88bae8c-118e-45ca-9c49-79f540da5c45a1046f14-9c07-42d7-b2b8-667f9174338b88c56a0e-28b3-4449-b51a-9dcab962d94ff88bae8c-118e-45ca-9c49-79f540da5c4564033dc7-04b9-4171-a62f-b7ec8723ae4f89f64939-2ebc-4cce-bb27-3b9d08f37897f88bae8c-118e-45ca-9c49-79f540da5c4564033dc7-04b9-4171-a62f-b7ec8723ae4f906aa287-01b2-45d6-9596-d8a12c591d258e1aff8d-1217-4fcc-bf9c-1570c066081f64033dc7-04b9-4171-a62f-b7ec8723ae4f906aa287-01b2-45d6-9596-d8a12c591d258df395b6-df8d-41e7-b94f-afbfd899007509636fa8-b0f3-4c1f-af91-108d3470bf4e906aa287-01b2-45d6-9596-d8a12c591d258df395b6-df8d-41e7-b94f-afbfd89900758df395b6-df8d-41e7-b94f-afbfd899007502a493f6-c409-43f0-85e5-4546760f5db7973539cd-fb20-4a90-9809-348a108dc510ff34e809-33e8-4606-9296-56a52cafc95502a493f6-c409-43f0-85e5-4546760f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References

Authors Journal Year Pubmed link Title
1 Xu et al. Virology 2014 24314655 microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture.
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