Precursor miRBase

chi-mir-543 (MI0030820)

Accession MI0030820
Name chi-mir-543
similar to following miRCarta precursors chi-36880-579.1
Organism Capra hircus
Genome CHIR_1.0
Location chr21:62,836,246-62,836,368 (+)
miRNA chi-miR-543-5p
miRNA chi-miR-543-3p
Sequence (5' -> 3')
(123 nts)
GCUGAGCUGCCGAAUGAUCCUGACCUGUGGUGCUUAAGGAGAAGUUGCCCGUGUCUUUUUCGCUUUAUAUGUGACGAAACAUUCGCGGUGCACUUCUUUUUCAGUAUCCAAUUCAGCCUCGAA
MFE -38.30 kcal/mol
first miRBase version 21.0
last miRBase version 21.0
Clusters (10 kb)
(18 precursors)
chi-mir-411a
chi-mir-380
chi-mir-411b
chi-mir-1197
chi-mir-323a
chi-mir-758
chi-mir-329b
chi-mir-329a
chi-mir-494
chi-mir-543
chi-mir-495
chi-mir-3958
chi-mir-376e
chi-mir-376c
chi-mir-376d
chi-mir-376b
chi-mir-376a
chi-mir-1185
Family mir-329 (MIPF0000110)
Experiments
experiment Pubmed link
Illumina 23981187
External DBs
Gene symbol MIR543
NCBI Gene 104795854

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Wu et al. Reprod. Domest. Anim. 2014 23981187 Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing.