Precursor miRBase

rno-mir-196b-2 (MI0031760)

Accession MI0031760
Name rno-mir-196b-2
similar to following miRCarta precursors rno-146-1143.1 rno-146-1143.2
Organism Rattus norvegicus
Genome Rnor_5.0
Location chr4:146,951,682-146,951,766 (-)
miRNA rno-miR-196b-5p
miRNA rno-miR-196b-3p
Sequence (5' -> 3')
(85 nts)
AACUGGUCGGUGAUUUAGGUAGUUUCCUGUUGUUGGGAUCCACCUUUCUCUCGACAGCACGACACUGCCUUCAUUACUUCAGUUG
MFE -35.50 kcal/mol
first miRBase version 21.0
last miRBase version 21.0
Clusters (10 kb)
(1 precursors)
rno-mir-196b-2
Family mir-196 (MIPF0000031)
Experiments
experiment Pubmed link
SOLiD 20403161

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Yekta et al. Science 2004 15105502 MicroRNA-directed cleavage of HOXB8 mRNA.
2 Landgraf et al. Cell 2007 17604727 A mammalian microRNA expression atlas based on small RNA library sequencing.
3 Linsen et al. BMC Genomics 2010 20403161 Small RNA expression and strain specificity in the rat.