Precursor miRBase

rno-mir-29b-3 (MI0031777)

Accession MI0031777
Name rno-mir-29b-3
similar to following miRCarta precursors rno-239-81.1 rno-239-81.2
Organism Rattus norvegicus
Genome Rnor_5.0
Location chr13:118,329,450-118,329,530 (+)
miRNA rno-miR-29b-5p
miRNA rno-miR-29b-3p
Sequence (5' -> 3')
(81 nts)
CUUCUGGAAGCUGGUUUCACAUGGUGGCUUAGAUUUUUCCAUCUUUGUAUCUAGCACCAUUUGAAAUCAGUGUUUUAGGAG
MFE -31.10 kcal/mol
first miRBase version 21.0
last miRBase version 21.0
Clusters (10 kb)
(3 precursors)
rno-mir-29b-3
rno-mir-3556b-2
rno-mir-29c-2
Family mir-29 (MIPF0000009)
Experiments
experiment Pubmed link
cloned 17604727
SOLiD 20403161

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Miska et al. Genome Biol. 2004 15345052 Microarray analysis of microRNA expression in the developing mammalian brain.
2 Watanabe et al. Genes Dev. 2006 16766679 Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes.
3 Landgraf et al. Cell 2007 17604727 A mammalian microRNA expression atlas based on small RNA library sequencing.
4 He et al. Acta Biochim. Biophys. Sin. (Shanghai) 2007 17805466 Cloning and identification of novel microRNAs from rat hippocampus.
5 Linsen et al. BMC Genomics 2010 20403161 Small RNA expression and strain specificity in the rat.