Precursor miRBase

oar-mir-539 (MI0016942)

Accession MI0016942
Name oar-mir-539
similar to following miRCarta precursors oar-41326-41325.1
Organism Ovis aries
Genome Oar_v3.1
Location chr18:64,640,979-64,641,088 (+)
miRNA oar-miR-539-5p
miRNA oar-miR-539-3p
Sequence (5' -> 3')
(110 nts)
CACGUCGCUAUCUCAUACUUGAGGAGAAAUUAUCCUUGGUGUGUUCACUUUAUUUGGGAUGAAUCAUACAAGGACAAUUUCUUUUUGAGUAUCAAAUCCUGCCUCGGCGG
MFE -36.30 kcal/mol
first miRBase version 17.0
last miRBase version 21.0
Clusters (10 kb)
(21 precursors)
oar-mir-3958
oar-mir-376e
oar-mir-376c
oar-mir-376d
oar-mir-654
oar-mir-376b
oar-mir-376a
oar-mir-1185
oar-mir-3956
oar-mir-381
oar-mir-487b
oar-mir-539
oar-mir-544
oar-mir-655
oar-mir-3959
oar-mir-487a
oar-mir-382
oar-mir-134
oar-mir-668
oar-mir-485
oar-mir-323b
Family mir-154 (MIPF0000018)
Experiments
experiment Pubmed link
Illumina 20944086
External DBs
Gene symbol MIR539
NCBI Gene 102466463

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Caiment et al. Genome Res. 2010 20944086 Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing.