Precursor miRBase

ppy-mir-539 (MI0015038)

Accession MI0015038
Name ppy-mir-539
similar to following miRCarta precursors ppy-433.1
Organism Pongo abelii
Genome PPYG2
Location 14:102,609,453-102,609,530 (+)
miRNA ppy-miR-539
Sequence (5' -> 3')
(78 nts)
AUACUUGAGGAGAAAUUAUCCUUGGUGUGUUCGCUUUAUUUAUGAUGAAUCAUACAAGGACAAUUUCUUUUUGAGUAU
MFE -27.90 kcal/mol
first miRBase version 15.0
last miRBase version 21.0
Clusters (10 kb)
(20 precursors)
ppy-mir-376c
ppy-mir-376a-2
ppy-mir-654
ppy-mir-376b
ppy-mir-376a-1
ppy-mir-300
ppy-mir-1185-1
ppy-mir-1185-2
ppy-mir-381
ppy-mir-487b
ppy-mir-539
ppy-mir-889
ppy-mir-544
ppy-mir-655
ppy-mir-487a
ppy-mir-382
ppy-mir-134
ppy-mir-668
ppy-mir-485
ppy-mir-453
Family mir-154 (MIPF0000018)

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Brameier et al. BMC Res Notes 2010 20214803 Genome-wide comparative analysis of microRNAs in three non-human primates.