Precursor miRBase

tgu-mir-138-1 (MI0013715)

Accession MI0013715
Name tgu-mir-138-1
similar to following miRCarta precursors tgu-35844-35843.1
Organism Taeniopygia guttata
Genome taeGut3.2.4
Location chr2:61,107,967-61,108,039 (-)
miRNA tgu-miR-138-5p
miRNA tgu-miR-138-1-3p
Sequence (5' -> 3')
(73 nts)
GCUGUGCAACAGCUGGUGUUGUGAAUCAGGCCGUCACCAGUCGGAGAACGGCUACUUCACAACACCAGGGUCG
MFE -34.40 kcal/mol
first miRBase version 15.0
last miRBase version 21.0
Clusters (10 kb)
(2 precursors)
tgu-mir-2972
tgu-mir-138-1
Family mir-138 (MIPF0000075)
Experiments
experiment Pubmed link
Illumina 23268654

Predicted Structure

6c427d8b-d7b5-42e7-ad45-c9d5c53f6727bfe4a6fa-e5cc-482d-bd0b-41b61523397af3cd58d2-0447-4dc6-b4e1-9c8f1d2581734a621755-7b01-40d1-9e91-2777000424ea6c427d8b-d7b5-42e7-ad45-c9d5c53f6727f3cd58d2-0447-4dc6-b4e1-9c8f1d2581739e1e6678-e727-4a20-80d9-33f18fa57ac3a5b19fbf-0d61-4fdb-bc41-c6aad63016bbf3cd58d2-0447-4dc6-b4e1-9c8f1d2581739e1e6678-e727-4a20-80d9-33f18fa57ac304fc51db-1363-4b21-aabf-f5429b909a38a9f7ece9-7a18-483c-a366-b3cff5dda9ca9e1e6678-e727-4a20-80d9-33f18fa57ac304fc51db-1363-4b21-aabf-f5429b909a38544cccf3-4678-4af2-aed2-fb3363964b7790b447d7-ce0c-4122-8717-565cf4f4879c04fc51db-1363-4b21-aabf-f5429b909a38544cccf3-4678-4af2-aed2-fb3363964b77544cccf3-4678-4af2-aed2-fb3363964b77307e8f66-e848-46ee-8175-1b398bf1ff55307e8f66-e848-46ee-8175-1b398bf1ff55f106ef73-e529-4ade-b5a1-af4417eb7ec0f106ef73-e529-4ade-b5a1-af4417eb7ec0c810a9b1-3607-4e09-9fa3-889a1dfdae9d90b447d7-ce0c-4122-8717-565cf4f4879c544cccf3-4678-4af2-aed2-fb3363964b77c810a9b1-3607-4e09-9fa3-889a1dfdae9d90b447d7-ce0c-4122-8717-565cf4f4879ca9f7ece9-7a18-483c-a366-b3cff5dda9ca04fc51db-1363-4b21-aabf-f5429b909a3890b447d7-ce0c-4122-8717-565cf4f4879ca9f7ece9-7a18-483c-a366-b3cff5dda9caa5b19fbf-0d61-4fdb-bc41-c6aad63016bb9e1e6678-e727-4a20-80d9-33f18fa57ac3a9f7ece9-7a18-483c-a366-b3cff5dda9caa5b19fbf-0d61-4fdb-bc41-c6aad63016bb4a621755-7b01-40d1-9e91-2777000424eaf3cd58d2-0447-4dc6-b4e1-9c8f1d258173a5b19fbf-0d61-4fdb-bc41-c6aad63016bb4a621755-7b01-40d1-9e91-2777000424eabfe4a6fa-e5cc-482d-bd0b-41b61523397a6c427d8b-d7b5-42e7-ad45-c9d5c53f67274a621755-7b01-40d1-9e91-2777000424eabfe4a6fa-e5cc-482d-bd0b-41b61523397ad3cc265f-d3dd-4ede-9604-4e91aeaef6facf8ec61d-d560-4dbc-bc30-aa703fb6adffbfe4a6fa-e5cc-482d-bd0b-41b61523397ad3cc265f-d3dd-4ede-9604-4e91aeaef6fa08cce0cb-9726-4461-95d5-2c83fd2525b23998c243-b278-4692-87a3-444f7f21f817d3cc265f-d3dd-4ede-9604-4e91aeaef6fa08cce0cb-9726-4461-95d5-2c83fd2525b2f789ad5a-2b49-4692-9bf7-23e562ba4a1e1cc8294a-a62c-4f68-94f2-d825dd51580008cce0cb-9726-4461-95d5-2c83fd2525b2f789ad5a-2b49-4692-9bf7-23e562ba4a1e77677baa-8992-440b-93fd-13c333c58b92992e88d9-20ff-4a5c-9543-ed73d4ebb1f3f789ad5a-2b49-4692-9bf7-23e562ba4a1e77677baa-8992-440b-93fd-13c333c58b92c42512e7-1ac6-4100-a9c6-eb3d616870a4ecbab173-4960-47df-a8a3-ec602b064cda77677baa-8992-440b-93fd-13c333c58b92c42512e7-1ac6-4100-a9c6-eb3d616870a41206f4c6-75f5-4187-98c2-24e23268807d475d4c42-499f-49a7-b465-227c3b478d47c42512e7-1ac6-4100-a9c6-eb3d616870a41206f4c6-75f5-4187-98c2-24e23268807dce2eda60-13fe-47b1-b01a-9d2eba712af07d8f31af-98ff-40a7-a0ab-85ee1b6f6a001206f4c6-75f5-4187-98c2-24e23268807dce2eda60-13fe-47b1-b01a-9d2eba712af08b668785-bdf1-46e0-8780-c1b2e1fe0f0a79f4d181-b4e9-4c3b-8274-363f49568aafce2eda60-13fe-47b1-b01a-9d2eba712af08b668785-bdf1-46e0-8780-c1b2e1fe0f0a3afbf75f-41d7-4398-802c-1e777ea8d5c011604d93-bf1e-4d3d-af66-e28db8a811c78b668785-bdf1-46e0-8780-c1b2e1fe0f0a3afbf75f-41d7-4398-802c-1e777ea8d5c084922fcd-32e5-4eb2-a3d2-12b356911c5afce1fdd1-018c-453b-9aef-c9b099cc6b273afbf75f-41d7-4398-802c-1e777ea8d5c084922fcd-32e5-4eb2-a3d2-12b356911c5a411be374-efa4-41d9-9e70-3740400c395578068d62-36c8-4455-9341-0b4877eb508084922fcd-32e5-4eb2-a3d2-12b356911c5a411be374-efa4-41d9-9e70-3740400c395551542eb8-6d5a-4f7e-8681-aee6e26fcf6b5fd11caa-5776-42f3-9e5c-bd5478e42aa9411be374-efa4-41d9-9e70-3740400c395551542eb8-6d5a-4f7e-8681-aee6e26fcf6b51542eb8-6d5a-4f7e-8681-aee6e26fcf6b96ebe081-ca29-4dc0-94ee-9ead8d81720596ebe081-ca29-4dc0-94ee-9ead8d817205b5eb03c8-3842-41c8-bafa-05d22c0b368ab5eb03c8-3842-41c8-bafa-05d22c0b368a7cc97ca8-06a2-438b-9d4b-48e83d237e357db86888-a259-4979-b258-4c1e3bb282bedc142f2d-eb61-4dbc-9a85-c4537ed10fc07cc97ca8-06a2-438b-9d4b-48e83d237e357db86888-a259-4979-b258-4c1e3bb282beb6e0f3a7-aa0d-486e-bc39-3d1aa92d607bc6bc00e5-9fb0-44d5-a560-683ec77567f47db86888-a259-4979-b258-4c1e3bb282beb6e0f3a7-aa0d-486e-bc39-3d1aa92d607b57d36cf3-fac9-4472-af1d-60925608acbc241c4ccd-9031-4fe4-9b3b-f516e251f98cb6e0f3a7-aa0d-486e-bc39-3d1aa92d607b57d36cf3-fac9-4472-af1d-60925608acbc3aab181c-64e4-4d33-97b9-81c7feb294d400a21df0-14c7-417e-a6fd-a45aade9c3c957d36cf3-fac9-4472-af1d-60925608acbc3aab181c-64e4-4d33-97b9-81c7feb294d404a8b00d-0726-4688-bc3b-c0cf99c2faf5134c0933-d827-4075-9948-d095da840c4d3aab181c-64e4-4d33-97b9-81c7feb294d404a8b00d-0726-4688-bc3b-c0cf99c2faf580e790f2-d71c-4d0a-bb43-1f95340cc39d994a71cc-4e29-4946-a7a8-18884efe52f704a8b00d-0726-4688-bc3b-c0cf99c2faf580e790f2-d71c-4d0a-bb43-1f95340cc39d42a08601-09d0-4fb2-a9d5-0f8472f8a6780470b8f8-0cd2-4e17-a7f8-2d507ec83c8580e790f2-d71c-4d0a-bb43-1f95340cc39d42a08601-09d0-4fb2-a9d5-0f8472f8a67842a08601-09d0-4fb2-a9d5-0f8472f8a6783a57fa1c-347c-4a1f-8ab6-9cdfcd75452a02adce20-3457-41de-a6ef-31fae6d12c4ffbf71207-8b20-44b9-a3fe-22f9883166453a57fa1c-347c-4a1f-8ab6-9cdfcd75452a02adce20-3457-41de-a6ef-31fae6d12c4fb81b6ffb-e663-4600-b0a8-5a9cbf0fc4651d25150f-3d50-4738-922b-8186f185617f02adce20-3457-41de-a6ef-31fae6d12c4fb81b6ffb-e663-4600-b0a8-5a9cbf0fc465b81b6ffb-e663-4600-b0a8-5a9cbf0fc465bf17f214-cee0-48ee-8907-43935c68ba2cbf17f214-cee0-48ee-8907-43935c68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5pempty:20Utgu-miR-138-5ptgu-miR-138-5pempty:21Gtgu-miR-138-5ptgu-miR-138-5pempty:22Utgu-miR-138-5ptgu-miR-138-5pempty:23Gtgu-miR-138-5ptgu-miR-138-5pempty:24Atgu-miR-138-5ptgu-miR-138-5pempty:25Atgu-miR-138-5ptgu-miR-138-5pempty:26Utgu-miR-138-5ptgu-miR-138-5pempty:27Ctgu-miR-138-5ptgu-miR-138-5pempty:28Atgu-miR-138-5ptgu-miR-138-5pempty:29Gtgu-miR-138-5ptgu-miR-138-5pempty:30Gtgu-miR-138-5ptgu-miR-138-5pempty:31Ctgu-miR-138-5ptgu-miR-138-5pempty:32Ctgu-miR-138-5ptgu-miR-138-5pempty:33Gtgu-miR-138-5pempty:34empty:34Uempty:34empty:35empty:35Cempty:35empty:36empty:36Aempty:36empty:37empty:37Cempty:37empty:38empty:38Cempty:38empty:39empty:39Aempty:39empty:40empty:40Gempty:40empty:41empty:41Uempty:41empty:42empty:42Cempty:42empty:43empty:43Gempty:43empty:44empty:44Gempty:44empty:45empty:45Aempty:45empty:46empty:46Gempty:46empty:47empty:47Aempty:47empty:48empty:48Aempty:48empty:49empty:49Cempty:49empty:50empty:50Gempty:50tgu-miR-138-1-3pempty:51Gtgu-miR-138-1-3ptgu-miR-138-1-3pempty:52Ctgu-miR-138-1-3ptgu-miR-138-1-3pempty:53Utgu-miR-138-1-3ptgu-miR-138-1-3pempty:54Atgu-miR-138-1-3ptgu-miR-138-1-3pempty:55Ctgu-miR-138-1-3ptgu-miR-138-1-3pempty:56Utgu-miR-138-1-3ptgu-miR-138-1-3pempty:57Utgu-miR-138-1-3ptgu-miR-138-1-3pempty:58Ctgu-miR-138-1-3ptgu-miR-138-1-3pempty:59Atgu-miR-138-1-3ptgu-miR-138-1-3pempty:60Ctgu-miR-138-1-3ptgu-miR-138-1-3pempty:61Atgu-miR-138-1-3ptgu-miR-138-1-3pempty:62Atgu-miR-138-1-3ptgu-miR-138-1-3pempty:63Ctgu-miR-138-1-3ptgu-miR-138-1-3pempty:64Atgu-miR-138-1-3ptgu-miR-138-1-3pempty:65Ctgu-miR-138-1-3ptgu-miR-138-1-3pempty:66Ctgu-miR-138-1-3ptgu-miR-138-1-3pempty:67Atgu-miR-138-1-3ptgu-miR-138-1-3pempty:68Gtgu-miR-138-1-3ptgu-miR-138-1-3pempty:69Gtgu-miR-138-1-3ptgu-miR-138-1-3pempty:70Gtgu-miR-138-1-3ptgu-miR-138-1-3pempty:71Utgu-miR-138-1-3pempty:72empty:72Cempty:72empty:73empty:73Gempty:7310203040506070

References

Authors Journal Year Pubmed link Title
1 Warren et al. Nature 2010 20360741 The genome of a songbird.
2 Luo et al. BMC Genomics 2012 23268654 Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression.
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