Precursor miRBase

tgu-mir-138-1 (MI0013715)

Accession MI0013715
Name tgu-mir-138-1
similar to following miRCarta precursors tgu-35844-35843.1
Organism Taeniopygia guttata
Genome taeGut3.2.4
Location chr2:61,107,967-61,108,039 (-)
miRNA tgu-miR-138-5p
miRNA tgu-miR-138-1-3p
Sequence (5' -> 3')
(73 nts)
GCUGUGCAACAGCUGGUGUUGUGAAUCAGGCCGUCACCAGUCGGAGAACGGCUACUUCACAACACCAGGGUCG
MFE -34.40 kcal/mol
first miRBase version 15.0
last miRBase version 21.0
Clusters (10 kb)
(2 precursors)
tgu-mir-2972
tgu-mir-138-1
Family mir-138 (MIPF0000075)
Experiments
experiment Pubmed link
Illumina 23268654

Predicted Structure

ad414ec4-b2c4-43f6-9dd9-c08e7e31972dbf65c40b-0560-49e5-a513-c075692cd6a0ccc7d1b6-0131-45e0-91d4-e0eccb8f09fba21e7ac0-54ba-4ff0-a162-e3c31991f1eaad414ec4-b2c4-43f6-9dd9-c08e7e31972dccc7d1b6-0131-45e0-91d4-e0eccb8f09fb8f19be97-6af5-4e48-81dc-7d360821fe34fab834fd-ec1b-4af3-b267-9a1ce3d93063ccc7d1b6-0131-45e0-91d4-e0eccb8f09fb8f19be97-6af5-4e48-81dc-7d360821fe349c051f83-3c95-400b-bfe3-8fbf982069e397304f4e-fa21-42ea-b5e1-384cd4821e8e8f19be97-6af5-4e48-81dc-7d360821fe349c051f83-3c95-400b-bfe3-8fbf982069e36ff7ac8e-5eec-49e7-bcc1-48de8fb93b50c13c4133-4b24-47ff-a1d4-2980715ce7839c051f83-3c95-400b-bfe3-8fbf982069e36ff7ac8e-5eec-49e7-bcc1-48de8fb93b506ff7ac8e-5eec-49e7-bcc1-48de8fb93b50f7a96ba0-dba2-4d17-b07f-8f7ab05c4cfef7a96ba0-dba2-4d17-b07f-8f7ab05c4cfe5d93b548-7b0c-4f7c-9247-a123aa95dac25d93b548-7b0c-4f7c-9247-a123aa95dac24a2efab9-f363-4e49-a863-0da0f73c1707c13c4133-4b24-47ff-a1d4-2980715ce7836ff7ac8e-5eec-49e7-bcc1-48de8fb93b504a2efab9-f363-4e49-a863-0da0f73c1707c13c4133-4b24-47ff-a1d4-2980715ce78397304f4e-fa21-42ea-b5e1-384cd4821e8e9c051f83-3c95-400b-bfe3-8fbf982069e3c13c4133-4b24-47ff-a1d4-2980715ce78397304f4e-fa21-42ea-b5e1-384cd4821e8efab834fd-ec1b-4af3-b267-9a1ce3d930638f19be97-6af5-4e48-81dc-7d360821fe3497304f4e-fa21-42ea-b5e1-384cd4821e8efab834fd-ec1b-4af3-b267-9a1ce3d93063a21e7ac0-54ba-4ff0-a162-e3c31991f1eaccc7d1b6-0131-45e0-91d4-e0eccb8f09fbfab834fd-ec1b-4af3-b267-9a1ce3d93063a21e7ac0-54ba-4ff0-a162-e3c31991f1eabf65c40b-0560-49e5-a513-c075692cd6a0ad414ec4-b2c4-43f6-9dd9-c08e7e31972da21e7ac0-54ba-4ff0-a162-e3c31991f1eabf65c40b-0560-49e5-a513-c075692cd6a0fcf4331a-487b-46bf-b8fe-0cedf3d3392c3cd63b57-7dac-4a01-b59b-a64232f99450bf65c40b-0560-49e5-a513-c075692cd6a0fcf4331a-487b-46bf-b8fe-0cedf3d3392ca2ffeb0e-280a-499b-abd8-f6146ad167deae2e29dc-4086-46d1-88b0-8c1e9f04e030fcf4331a-487b-46bf-b8fe-0cedf3d3392ca2ffeb0e-280a-499b-abd8-f6146ad167de76e13f4d-cf97-4dd2-8277-c71dd9af9aacdc938aec-8303-488f-872e-9eb8a51b9369a2ffeb0e-280a-499b-abd8-f6146ad167de76e13f4d-cf97-4dd2-8277-c71dd9af9aaca0bcb82f-f7cd-4591-a2fe-53ea928a648181dfdd0f-b66e-4f98-a700-7e437acb271d76e13f4d-cf97-4dd2-8277-c71dd9af9aaca0bcb82f-f7cd-4591-a2fe-53ea928a6481f0913179-3d5b-47cb-89ca-b07e8d6bfbf8e972ee46-5a26-4666-bae4-223d898d0503a0bcb82f-f7cd-4591-a2fe-53ea928a6481f0913179-3d5b-47cb-89ca-b07e8d6bfbf8b22a85c5-d52f-4712-9055-ba558ba41365f4ab4d62-424f-46a0-b750-b2d4489c5d39f0913179-3d5b-47cb-89ca-b07e8d6bfbf8b22a85c5-d52f-4712-9055-ba558ba41365b872d98d-c1d3-41f7-aaf2-305be3e68222248c54fc-3f79-4c9a-b8f9-d7ce9ef7cba9b22a85c5-d52f-4712-9055-ba558ba41365b872d98d-c1d3-41f7-aaf2-305be3e68222c179b444-2fd0-4ccd-b9dd-c8109ffe91c562e1ea4a-e7aa-469b-8393-3cf253020473b872d98d-c1d3-41f7-aaf2-305be3e68222c179b444-2fd0-4ccd-b9dd-c8109ffe91c53f4ad35f-9fd8-45ef-9bac-60adffbbdaaeb92fbbcb-7795-44c6-b67b-008d3fe6ed15c179b444-2fd0-4ccd-b9dd-c8109ffe91c53f4ad35f-9fd8-45ef-9bac-60adffbbdaae44a5b1f1-8a59-4dbb-bd1b-456a470df59dca4a0e81-e932-4fdc-8606-0156fad74e9c3f4ad35f-9fd8-45ef-9bac-60adffbbdaae44a5b1f1-8a59-4dbb-bd1b-456a470df59dfc8492fe-ea03-42ea-b3d5-50cbe6f1a61c9de7ff12-20b7-4417-979c-675916eccaef44a5b1f1-8a59-4dbb-bd1b-456a470df59dfc8492fe-ea03-42ea-b3d5-50cbe6f1a61c2035c5e7-bb5b-4a76-8234-8fe12a9d0a02228ef5ff-edce-48b8-ad98-309facb6631ffc8492fe-ea03-42ea-b3d5-50cbe6f1a61c2035c5e7-bb5b-4a76-8234-8fe12a9d0a022035c5e7-bb5b-4a76-8234-8fe12a9d0a02b3f771ad-3cfc-4006-bf15-f6a64ded78dfb3f771ad-3cfc-4006-bf15-f6a64ded78dfff14fe3d-cdbf-4554-97dc-a4c40751977aff14fe3d-cdbf-4554-97dc-a4c40751977afc22148c-8b81-4865-af48-0e7b946ce608439ac6ea-e38c-466f-8608-807bbe387b7987ac933e-7343-46a6-8f96-55586e28b82ffc22148c-8b81-4865-af48-0e7b946ce608439ac6ea-e38c-466f-8608-807bbe387b793ddac8d9-9545-4e1a-aeb6-606c72fcff3db6f3d583-a642-4e86-9cd2-06d3646f6b87439ac6ea-e38c-466f-8608-807bbe387b793ddac8d9-9545-4e1a-aeb6-606c72fcff3d0574daa3-531a-489b-b9b7-09f18fe2276ac1662d86-52d2-4b5d-b39c-73220efdfe613ddac8d9-9545-4e1a-aeb6-606c72fcff3d0574daa3-531a-489b-b9b7-09f18fe2276a23030fee-d48c-4d4e-80ea-8e98254352a972a463ba-c791-4675-abee-65a6e6fbd10d0574daa3-531a-489b-b9b7-09f18fe2276a23030fee-d48c-4d4e-80ea-8e98254352a932d87ea2-a4b2-4921-ab19-3d73ba98789cef7ea92a-cf55-442e-8167-6f17274ab9bb23030fee-d48c-4d4e-80ea-8e98254352a932d87ea2-a4b2-4921-ab19-3d73ba98789c26c78de8-3d47-4d91-a4d7-6378a534dd724f730bbe-14bf-40e7-a411-ce318046ddec32d87ea2-a4b2-4921-ab19-3d73ba98789c26c78de8-3d47-4d91-a4d7-6378a534dd72a11f899f-1cf6-4a82-a9ff-61b5dbe9c3091e5da397-b2d3-4d8a-8666-e0cae091492426c78de8-3d47-4d91-a4d7-6378a534dd72a11f899f-1cf6-4a82-a9ff-61b5dbe9c309a11f899f-1cf6-4a82-a9ff-61b5dbe9c3099a25f6d5-2b39-4c31-8c25-71d20a8c3405cbaf8011-16f7-45ed-ac31-7d617b3102c986679ed4-3da1-4788-bbbc-739c9912971b9a25f6d5-2b39-4c31-8c25-71d20a8c3405cbaf8011-16f7-45ed-ac31-7d617b3102c9686819c1-e458-453a-ae45-2e5356c947d6c4b75be2-6d79-4890-8cc2-fa79c0abdbbccbaf8011-16f7-45ed-ac31-7d617b3102c9686819c1-e458-453a-ae45-2e5356c947d6686819c1-e458-453a-ae45-2e5356c947d64b951e60-9a1a-4293-812c-252c565005b84b951e60-9a1a-4293-812c-252c5650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5pempty:20Utgu-miR-138-5ptgu-miR-138-5pempty:21Gtgu-miR-138-5ptgu-miR-138-5pempty:22Utgu-miR-138-5ptgu-miR-138-5pempty:23Gtgu-miR-138-5ptgu-miR-138-5pempty:24Atgu-miR-138-5ptgu-miR-138-5pempty:25Atgu-miR-138-5ptgu-miR-138-5pempty:26Utgu-miR-138-5ptgu-miR-138-5pempty:27Ctgu-miR-138-5ptgu-miR-138-5pempty:28Atgu-miR-138-5ptgu-miR-138-5pempty:29Gtgu-miR-138-5ptgu-miR-138-5pempty:30Gtgu-miR-138-5ptgu-miR-138-5pempty:31Ctgu-miR-138-5ptgu-miR-138-5pempty:32Ctgu-miR-138-5ptgu-miR-138-5pempty:33Gtgu-miR-138-5pempty:34empty:34Uempty:34empty:35empty:35Cempty:35empty:36empty:36Aempty:36empty:37empty:37Cempty:37empty:38empty:38Cempty:38empty:39empty:39Aempty:39empty:40empty:40Gempty:40empty:41empty:41Uempty:41empty:42empty:42Cempty:42empty:43empty:43Gempty:43empty:44empty:44Gempty:44empty:45empty:45Aempty:45empty:46empty:46Gempty:46empty:47empty:47Aempty:47empty:48empty:48Aempty:48empty:49empty:49Cempty:49empty:50empty:50Gempty:50tgu-miR-138-1-3pempty:51Gtgu-miR-138-1-3ptgu-miR-138-1-3pempty:52Ctgu-miR-138-1-3ptgu-miR-138-1-3pempty:53Utgu-miR-138-1-3ptgu-miR-138-1-3pempty:54Atgu-miR-138-1-3ptgu-miR-138-1-3pempty:55Ctgu-miR-138-1-3ptgu-miR-138-1-3pempty:56Utgu-miR-138-1-3ptgu-miR-138-1-3pempty:57Utgu-miR-138-1-3ptgu-miR-138-1-3pempty:58Ctgu-miR-138-1-3ptgu-miR-138-1-3pempty:59Atgu-miR-138-1-3ptgu-miR-138-1-3pempty:60Ctgu-miR-138-1-3ptgu-miR-138-1-3pempty:61Atgu-miR-138-1-3ptgu-miR-138-1-3pempty:62Atgu-miR-138-1-3ptgu-miR-138-1-3pempty:63Ctgu-miR-138-1-3ptgu-miR-138-1-3pempty:64Atgu-miR-138-1-3ptgu-miR-138-1-3pempty:65Ctgu-miR-138-1-3ptgu-miR-138-1-3pempty:66Ctgu-miR-138-1-3ptgu-miR-138-1-3pempty:67Atgu-miR-138-1-3ptgu-miR-138-1-3pempty:68Gtgu-miR-138-1-3ptgu-miR-138-1-3pempty:69Gtgu-miR-138-1-3ptgu-miR-138-1-3pempty:70Gtgu-miR-138-1-3ptgu-miR-138-1-3pempty:71Utgu-miR-138-1-3pempty:72empty:72Cempty:72empty:73empty:73Gempty:7310203040506070

References

Authors Journal Year Pubmed link Title
1 Warren et al. Nature 2010 20360741 The genome of a songbird.
2 Luo et al. BMC Genomics 2012 23268654 Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression.
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