Precursor miRBase

tgu-mir-100-1 (MI0013708)

Accession MI0013708
Name tgu-mir-100-1
similar to following miRCarta precursors tgu-35949-35948.1 tgu-35949-35948.2
Organism Taeniopygia guttata
Genome taeGut3.2.4
Location chr24:3,146,829-3,146,939 (-)
miRNA tgu-miR-100-5p
miRNA tgu-miR-100-3p
Sequence (5' -> 3')
(111 nts)
UGCUGCCACAAACCCGUAGAUCCGAACUUGUGCUCAUAUUCCACACAAGCUUGUAUCUAUAGGUCUGUGGCUGGCUGGCAAGAGCACCCCGGGGUGCUGCUGCACUUCCCC
MFE -46.60 kcal/mol
first miRBase version 15.0
last miRBase version 21.0
Clusters (10 kb)
(3 precursors)
tgu-let-7a-2
tgu-mir-100-1
tgu-mir-100-2
Family mir-10 (MIPF0000033)
Experiments
experiment Pubmed link
Illumina 23268654 20360741
454 20360741

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Warren et al. Nature 2010 20360741 The genome of a songbird.
2 Luo et al. BMC Genomics 2012 23268654 Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression.