Precursor miRBase

ssc-mir-100 (MI0013128)

Accession MI0013128
Name ssc-mir-100
similar to following miRCarta precursors ssc-24912.1
Organism Sus scrofa
Genome Sscrofa10.2
Location chr9:54,383,382-54,383,461 (-)
miRNA ssc-miR-100
Sequence (5' -> 3')
(80 nts)
AGGCCUGUUGCCACAAACCCGUAGAUCCGAACUUGUGCUGAUAGUGCACACAAGCUUGUGUCUAUAGGUAUGUGUCUGUG
MFE -25.00 kcal/mol
first miRBase version 15.0
last miRBase version 21.0
Clusters (10 kb)
(2 precursors)
ssc-let-7a-1
ssc-mir-100
Family mir-10 (MIPF0000033)
Experiments
experiment Pubmed link
Illumina 21312241 24499489 19917043
cloned 20180025
External DBs
Gene symbol MIR100
NCBI Gene 100498766

Predicted Structure

a7b941cc-fcee-413b-a092-4701a127ac62be386e36-e380-4e52-9f74-5e844080dccdbdad4bbf-0c44-422f-96b4-64cc1938f87ba7b941cc-fcee-413b-a092-4701a127ac62e3edc3a6-cbbe-4ffb-a14f-7c63c73879c9a8b3ebd0-2a4e-44db-8aaf-c3b8d11eb734a7b941cc-fcee-413b-a092-4701a127ac62e3edc3a6-cbbe-4ffb-a14f-7c63c73879c939e5d80c-a27b-4fd1-874b-917398eb65b8e665e5b5-0da3-47c8-8490-232b808b3f78e3edc3a6-cbbe-4ffb-a14f-7c63c73879c939e5d80c-a27b-4fd1-874b-917398eb65b839e5d80c-a27b-4fd1-874b-917398eb65b83d313a48-ec4c-4d1c-9506-d589dbfdd4dc3d313a48-ec4c-4d1c-9506-d589dbfdd4dc2d77dd93-0fcc-408b-a701-df4a856db18f2d77dd93-0fcc-408b-a701-df4a856db18f1a4a06c4-3146-46b7-9e91-1e43539a60e21a4a06c4-3146-46b7-9e91-1e43539a60e2d7fa59ee-d053-404e-8e59-280f3241dbc6d7fa59ee-d053-404e-8e59-280f3241dbc6dfcba059-04cb-4c36-95a6-1143dc46bc1fe665e5b5-0da3-47c8-8490-232b808b3f7839e5d80c-a27b-4fd1-874b-917398eb65b8dfcba059-04cb-4c36-95a6-1143dc46bc1fe665e5b5-0da3-47c8-8490-232b808b3f78a8b3ebd0-2a4e-44db-8aaf-c3b8d11eb734e3edc3a6-cbbe-4ffb-a14f-7c63c73879c9e665e5b5-0da3-47c8-8490-232b808b3f78a8b3ebd0-2a4e-44db-8aaf-c3b8d11eb734be386e36-e380-4e52-9f74-5e844080dccda7b941cc-fcee-413b-a092-4701a127ac62a8b3ebd0-2a4e-44db-8aaf-c3b8d11eb734be386e36-e380-4e52-9f74-5e844080dccd548dbada-7bbc-4a91-a4bc-e5a10d98396a3aa032e9-eee6-4f95-b275-1903f5462f43be386e36-e380-4e52-9f74-5e844080dccd548dbada-7bbc-4a91-a4bc-e5a10d98396ac48bb538-3ec4-4b15-9da8-6f1f4fd3151dba08e7d5-cece-456c-828f-da84e443dca3548dbada-7bbc-4a91-a4bc-e5a10d98396ac48bb538-3ec4-4b15-9da8-6f1f4fd3151d5af677a4-0770-4e9c-852c-59d27e385d7f8edc71ba-821c-477b-a05e-9e3d4c74c94fc48bb538-3ec4-4b15-9da8-6f1f4fd3151d5af677a4-0770-4e9c-852c-59d27e385d7f5af677a4-0770-4e9c-852c-59d27e385d7f6cca6596-f130-40e2-9d60-1b14d7c28ad9f1213db4-7b26-4d9e-b3b1-9952c58de865151519fe-0267-409a-a2e8-140ba61c3a276cca6596-f130-40e2-9d60-1b14d7c28ad9f1213db4-7b26-4d9e-b3b1-9952c58de865c95386e0-a149-4a47-be30-8650c204ee6a8e6f18da-8443-4810-acae-125d2329be27f1213db4-7b26-4d9e-b3b1-9952c58de865c95386e0-a149-4a47-be30-8650c204ee6ae65aae8a-cb02-48fc-ad33-c22c09d0628874871351-5108-4567-a4c9-48fe76fd0ed1c95386e0-a149-4a47-be30-8650c204ee6ae65aae8a-cb02-48fc-ad33-c22c09d06288e65aae8a-cb02-48fc-ad33-c22c09d062888347ab2f-855f-4bcd-83d1-173fc090283a22ae2f44-514e-42ee-a9ef-a5772888788557fb5266-546f-4c9e-a55d-e01aa100c9cb8347ab2f-855f-4bcd-83d1-173fc090283a22ae2f44-514e-42ee-a9ef-a57728887885e965a519-f35f-446f-bc44-dd5f812479e86a4a657c-f11c-491e-a2b4-81ed313a1c1522ae2f44-514e-42ee-a9ef-a57728887885e965a519-f35f-446f-bc44-dd5f812479e85870c752-f0e5-4428-886e-5fdf621bb07d00b18896-e411-4520-8d9a-51adb38945ede965a519-f35f-446f-bc44-dd5f812479e85870c752-f0e5-4428-886e-5fdf621bb07d2631feff-8957-443f-8552-219fe0556c20939b0380-ff23-4790-be2a-c517ada1a9695870c752-f0e5-4428-886e-5fdf621bb07d2631feff-8957-443f-8552-219fe0556c204115ff7c-0dbd-44d0-8b78-8c92db1c7aa1c9a3b7b4-4654-4de9-8cc1-94e12b6114092631feff-8957-443f-8552-219fe0556c204115ff7c-0dbd-44d0-8b78-8c92db1c7aa137615503-c924-4393-80dd-9d7eac6aca842f4eef4b-5a90-406f-988c-f3be253816d34115ff7c-0dbd-44d0-8b78-8c92db1c7aa137615503-c924-4393-80dd-9d7eac6aca8437615503-c924-4393-80dd-9d7eac6aca848d33ea0d-43b5-4e25-a5aa-2b34f205a76a093eb91e-ac30-402a-b888-f8018f95004742b17375-1ce5-46cb-aabc-9ebae8c902d48d33ea0d-43b5-4e25-a5aa-2b34f205a76a093eb91e-ac30-402a-b888-f8018f950047042b6276-2fb4-4dee-bc60-54f61c114caf5403e897-2b07-4052-898f-44928f136206093eb91e-ac30-402a-b888-f8018f950047042b6276-2fb4-4dee-bc60-54f61c114caf04d69798-2fde-4b8b-abd4-1da1bfac41d7e2ad0665-ccf0-46c5-bda9-57a8c0e01c3e042b6276-2fb4-4dee-bc60-54f61c114caf04d69798-2fde-4b8b-abd4-1da1bfac41d704d69798-2fde-4b8b-abd4-1da1bfac41d761b845b8-e673-430a-9264-95a4862772e243cd532f-2be2-458c-910e-4c76686131afbe89bd14-05e2-462a-8fa6-0ce6e3680fc061b845b8-e673-430a-9264-95a4862772e243cd532f-2be2-458c-910e-4c76686131af9958ea8a-0927-4fb8-87fc-db72d3e1ba3879d4402e-2d2b-4dc9-8f02-3401471d6e0843cd532f-2be2-458c-910e-4c76686131af9958ea8a-0927-4fb8-87fc-db72d3e1ba3879e3c585-6da8-4b0e-bc80-0d821e4a664f3e727deb-6c08-435b-bb1c-e991b9e200799958ea8a-0927-4fb8-87fc-db72d3e1ba3879e3c585-6da8-4b0e-bc80-0d821e4a664f18a8f43f-9c73-452b-aa16-f0b90190591e618e4032-b8e9-4c28-aaa5-acb726667da179e3c585-6da8-4b0e-bc80-0d821e4a664f18a8f43f-9c73-452b-aa16-f0b90190591ecbe89d79-e0ed-468f-86dc-81ad3a2d0819b1a24623-49a9-44b7-8f95-e3417f2ab87718a8f43f-9c73-452b-aa16-f0b90190591ecbe89d79-e0ed-468f-86dc-81ad3a2d081901920ddc-a08c-4810-bd2c-57b1ea56f6ea17d1df44-22f9-41f6-a957-868b2e17183bcbe89d79-e0ed-468f-86dc-81ad3a2d081901920ddc-a08c-4810-bd2c-57b1ea56f6ea01920ddc-a08c-4810-bd2c-57b1ea56f6eaa6823af7-009e-4a1c-bc76-73dd30cf78ca30156aa3-0eac-4a53-8f9f-aab972edfa007a633f77-b0f6-4288-bcad-4f10bf68d63ea6823af7-009e-4a1c-bc76-73dd30cf78ca30156aa3-0eac-4a53-8f9f-aab972edfa00101b257b-c64d-4adf-b73f-6023f4d4ebb3972e7d4f-86d3-4b6c-a867-943085d5a92b30156aa3-0eac-4a53-8f9f-aab972edfa00101b257b-c64d-4adf-b73f-6023f4d4ebb3101b257b-c64d-4adf-b73f-6023f4d4ebb370730a9f-a384-4b74-9ba6-f9f14f0adaa070730a9f-a384-4b74-9ba6-f9f14f0a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92f4aa6fempty:1empty:1Aempty:1empty:2empty:2Gempty:2empty:3empty:3Gempty:3empty:4empty:4Cempty:4empty:5empty:5Cempty:5empty:6empty:6Uempty:6empty:7empty:7Gempty:7empty:8empty:8Uempty:8empty:9empty:9Uempty:9empty:10empty:10Gempty:10empty:11empty:11Cempty:11empty:12empty:12Cempty:12empty:13empty:13Aempty:13empty:14empty:14Cempty:14empty:15empty:15Aempty:15ssc-miR-100empty:16Assc-miR-100ssc-miR-100empty:17Assc-miR-100ssc-miR-100empty:18Cssc-miR-100ssc-miR-100empty:19Cssc-miR-100ssc-miR-100empty:20Cssc-miR-100ssc-miR-100empty:21Gssc-miR-100ssc-miR-100empty:22Ussc-miR-100ssc-miR-100empty:23Assc-miR-100ssc-miR-100empty:24Gssc-miR-100ssc-miR-100empty:25Assc-miR-100ssc-miR-100empty:26Ussc-miR-100ssc-miR-100empty:27Cssc-miR-100ssc-miR-100empty:28Cssc-miR-100ssc-miR-100empty:29Gssc-miR-100ssc-miR-100empty:30Assc-miR-100ssc-miR-100empty:31Assc-miR-100ssc-miR-100empty:32Cssc-miR-100ssc-miR-100empty:33Ussc-miR-100ssc-miR-100empty:34Ussc-miR-100ssc-miR-100empty:35Gssc-miR-100ssc-miR-100empty:36Ussc-miR-100ssc-miR-100empty:37Gssc-miR-100empty:38empty:38Cempty:38empty:39empty:39Uempty:39empty:40empty:40Gempty:40empty:41empty:41Aempty:41empty:42empty:42Uempty:42empty:43empty:43Aempty:43empty:44empty:44Gempty:44empty:45empty:45Uempty:45empty:46empty:46Gempty:46empty:47empty:47Cempty:47empty:48empty:48Aempty:48empty:49empty:49Cempty:49empty:50empty:50Aempty:50empty:51empty:51Cempty:51empty:52empty:52Aempty:52empty:53empty:53Aempty:53empty:54empty:54Gempty:54empty:55empty:55Cempty:55empty:56empty:56Uempty:56empty:57empty:57Uempty:57empty:58empty:58Gempty:58empty:59empty:59Uempty:59empty:60empty:60Gempty:60empty:61empty:61Uempty:61empty:62empty:62Cempty:62empty:63empty:63Uempty:63empty:64empty:64Aempty:64empty:65empty:65Uempty:65empty:66empty:66Aempty:66empty:67empty:67Gempty:67empty:68empty:68Gempty:68empty:69empty:69Uempty:69empty:70empty:70Aempty:70empty:71empty:71Uempty:71empty:72empty:72Gempty:72empty:73empty:73Uempty:73empty:74empty:74Gempty:74empty:75empty:75Uempty:75empty:76empty:76Cempty:76empty:77empty:77Uempty:77empty:78empty:78Gempty:78empty:79empty:79Uempty:79empty:80empty:80Gempty:801020304050607080

References

Authors Journal Year Pubmed link Title
1 Nielsen et al. Anim. Genet. 2010 19917043 MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing.
2 Cho et al. Mol. Biol. Rep. 2010 20180025 Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue.
3 Li et al. J. Cell. Biochem. 2011 21312241 MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing.
4 Chen et al. BMC Genomics 2014 24499489 Exploration of microRNAs in porcine milk exosomes.
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