Precursor miRBase

ssc-mir-100 (MI0013128)

Accession MI0013128
Name ssc-mir-100
similar to following miRCarta precursors ssc-24912.1
Organism Sus scrofa
Genome Sscrofa10.2
Location chr9:54,383,382-54,383,461 (-)
miRNA ssc-miR-100
Sequence (5' -> 3')
(80 nts)
AGGCCUGUUGCCACAAACCCGUAGAUCCGAACUUGUGCUGAUAGUGCACACAAGCUUGUGUCUAUAGGUAUGUGUCUGUG
MFE -25.00 kcal/mol
first miRBase version 15.0
last miRBase version 21.0
Clusters (10 kb)
(2 precursors)
ssc-let-7a-1
ssc-mir-100
Family mir-10 (MIPF0000033)
Experiments
experiment Pubmed link
Illumina 21312241 24499489 19917043
cloned 20180025
External DBs
Gene symbol MIR100
NCBI Gene 100498766

Predicted Structure

94670344-5621-4a0c-a44b-57af9bd2a84eb6a83936-103f-44fd-b847-05045a11f1d832436017-1cfa-4d30-a718-054048873f7a94670344-5621-4a0c-a44b-57af9bd2a84ebcc4e17b-3ebf-4bcd-85cf-459ae659d38d8a79ba3b-2ccd-4bb3-a578-b68c50858c5594670344-5621-4a0c-a44b-57af9bd2a84ebcc4e17b-3ebf-4bcd-85cf-459ae659d38d01cf54ae-e33d-48ee-88fb-07f533da2a9720d47dee-8100-4188-8f7b-2a98d4571c3ebcc4e17b-3ebf-4bcd-85cf-459ae659d38d01cf54ae-e33d-48ee-88fb-07f533da2a9701cf54ae-e33d-48ee-88fb-07f533da2a971560f107-837a-48c4-aebc-2fc78593ddff1560f107-837a-48c4-aebc-2fc78593ddffe21b8b6f-ed34-48de-9cba-0cab6a41d3b0e21b8b6f-ed34-48de-9cba-0cab6a41d3b029e1fb5b-c08f-4668-b446-c7301c62953629e1fb5b-c08f-4668-b446-c7301c6295368a901acb-095c-4acf-b995-7a290439d0fb8a901acb-095c-4acf-b995-7a290439d0fb1a90bca7-a9b0-4132-bd89-520d79b2f8b920d47dee-8100-4188-8f7b-2a98d4571c3e01cf54ae-e33d-48ee-88fb-07f533da2a971a90bca7-a9b0-4132-bd89-520d79b2f8b920d47dee-8100-4188-8f7b-2a98d4571c3e8a79ba3b-2ccd-4bb3-a578-b68c50858c55bcc4e17b-3ebf-4bcd-85cf-459ae659d38d20d47dee-8100-4188-8f7b-2a98d4571c3e8a79ba3b-2ccd-4bb3-a578-b68c50858c55b6a83936-103f-44fd-b847-05045a11f1d894670344-5621-4a0c-a44b-57af9bd2a84e8a79ba3b-2ccd-4bb3-a578-b68c50858c55b6a83936-103f-44fd-b847-05045a11f1d85d5146cf-e2e2-48a2-a304-7c033113c1fe198d31b9-857d-4808-b2e0-ff8dbbb5880bb6a83936-103f-44fd-b847-05045a11f1d85d5146cf-e2e2-48a2-a304-7c033113c1fe4c46e061-6fcb-4498-ac1f-75ee190100aff07da2e3-c4cb-498a-b5c7-dea5c6d6f4415d5146cf-e2e2-48a2-a304-7c033113c1fe4c46e061-6fcb-4498-ac1f-75ee190100afa681dcfc-6767-4d53-8b3f-6917824138a129033c69-d97e-4c7b-abd2-f654799759e34c46e061-6fcb-4498-ac1f-75ee190100afa681dcfc-6767-4d53-8b3f-6917824138a1a681dcfc-6767-4d53-8b3f-6917824138a1742884ac-f234-4e5c-a523-153fae660da32b79ae8f-6d55-4b31-9834-de158af578117e910107-a148-4ee3-8975-556d78aaeb54742884ac-f234-4e5c-a523-153fae660da32b79ae8f-6d55-4b31-9834-de158af57811bc0b177b-7e68-4ca2-8147-0309769b9502b22da981-f5f4-406c-b493-64fbc9d48fa12b79ae8f-6d55-4b31-9834-de158af57811bc0b177b-7e68-4ca2-8147-0309769b95020e2fe763-7e77-4415-941a-73c1a8a8166ef5979563-cd7b-4a5e-a350-5ab76b2928ccbc0b177b-7e68-4ca2-8147-0309769b95020e2fe763-7e77-4415-941a-73c1a8a8166e0e2fe763-7e77-4415-941a-73c1a8a8166eb51b7557-bd46-4cc2-8faf-cc9f4f0312b3e4fcd339-9495-436d-9a4d-edd78531dada4b3c96b5-72dd-4f19-b2f5-38553abb49e7b51b7557-bd46-4cc2-8faf-cc9f4f0312b3e4fcd339-9495-436d-9a4d-edd78531dada33c13064-f9f1-4cce-b52d-ecdb095771f1c685b109-42fc-44e4-b7e5-370de18d9face4fcd339-9495-436d-9a4d-edd78531dada33c13064-f9f1-4cce-b52d-ecdb095771f1c200c049-f3a6-4867-a7ea-74df893597b01f315986-6a65-424c-a3f9-260a34b640c733c13064-f9f1-4cce-b52d-ecdb095771f1c200c049-f3a6-4867-a7ea-74df893597b05436ddec-36ec-46f8-8d05-096bb6cdf7641dd1c741-07f4-4cd7-bc68-7b432671e5bdc200c049-f3a6-4867-a7ea-74df893597b05436ddec-36ec-46f8-8d05-096bb6cdf76423755b25-9dfd-425a-8668-a653f29bbf494f7dcdb4-58d7-4358-a22f-9047684d5e205436ddec-36ec-46f8-8d05-096bb6cdf76423755b25-9dfd-425a-8668-a653f29bbf4981d6e69e-89f6-4720-b531-b782e526b189e91488dd-41f1-46ff-99a3-3e52ebe0f25b23755b25-9dfd-425a-8668-a653f29bbf4981d6e69e-89f6-4720-b531-b782e526b18981d6e69e-89f6-4720-b531-b782e526b18958ed05cb-ed4c-4f89-89f6-3007ba23236f8a3e6d64-8a1a-44cb-9724-1f90fcae5c091ab2c548-0647-4335-95d0-ff1617e5643a58ed05cb-ed4c-4f89-89f6-3007ba23236f8a3e6d64-8a1a-44cb-9724-1f90fcae5c09d58fd870-500c-4ecc-b65c-81a10aad7d46904e52c7-fb2c-4d05-8be6-c319952847fe8a3e6d64-8a1a-44cb-9724-1f90fcae5c09d58fd870-500c-4ecc-b65c-81a10aad7d46e748c612-b9de-4e2f-88a3-11617f3131e5dd112723-f8a5-4c0b-8e45-e7d72fefd809d58fd870-500c-4ecc-b65c-81a10aad7d46e748c612-b9de-4e2f-88a3-11617f3131e5e748c612-b9de-4e2f-88a3-11617f3131e5badad661-d5a2-4859-b767-1d55fb0e37153594299f-123c-42ee-9c35-e7ffad7d19efdbd24a8e-3b60-483f-b403-b049b16e62a6badad661-d5a2-4859-b767-1d55fb0e37153594299f-123c-42ee-9c35-e7ffad7d19efb84747cb-ec0d-4cb9-91e9-439f10d404d5f3840726-ff5b-4e19-a2f4-0710af37df393594299f-123c-42ee-9c35-e7ffad7d19efb84747cb-ec0d-4cb9-91e9-439f10d404d558381200-ecd3-40f3-8744-d69b057fbc95bb2bfaa1-fab5-4c8f-8ee6-7567a4575c02b84747cb-ec0d-4cb9-91e9-439f10d404d558381200-ecd3-40f3-8744-d69b057fbc95c3be3893-adb7-4c8d-9876-e3bcdcd3667d11764a3d-ff4b-4777-b90d-cdfdf186b90d58381200-ecd3-40f3-8744-d69b057fbc95c3be3893-adb7-4c8d-9876-e3bcdcd3667d2c8841ed-5f90-4d49-b3d9-4a549c31c87d2799363e-8ed2-460a-ba6c-458872fbac36c3be3893-adb7-4c8d-9876-e3bcdcd3667d2c8841ed-5f90-4d49-b3d9-4a549c31c87d22eafb3f-969c-4de8-a238-cdfd9e976ab44a58c88c-8098-44cd-941f-4f40c4f0eb4b2c8841ed-5f90-4d49-b3d9-4a549c31c87d22eafb3f-969c-4de8-a238-cdfd9e976ab422eafb3f-969c-4de8-a238-cdfd9e976ab4ed7280ef-18eb-482b-8a68-57478d904b5bc8e7d274-e389-4d16-ae1a-fdcf2b44c07c13f39672-a6f1-4f88-a556-b02db47a7ab9ed7280ef-18eb-482b-8a68-57478d904b5bc8e7d274-e389-4d16-ae1a-fdcf2b44c07ca45a9733-34bc-4c22-b3a0-f5b33f58258888d6ad8e-bc31-4482-9a78-07c603830e4cc8e7d274-e389-4d16-ae1a-fdcf2b44c07ca45a9733-34bc-4c22-b3a0-f5b33f582588a45a9733-34bc-4c22-b3a0-f5b33f58258888d683e2-5a91-489c-812c-375b4968805088d683e2-5a91-489c-812c-375b4968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b15e10d6empty:1empty:1Aempty:1empty:2empty:2Gempty:2empty:3empty:3Gempty:3empty:4empty:4Cempty:4empty:5empty:5Cempty:5empty:6empty:6Uempty:6empty:7empty:7Gempty:7empty:8empty:8Uempty:8empty:9empty:9Uempty:9empty:10empty:10Gempty:10empty:11empty:11Cempty:11empty:12empty:12Cempty:12empty:13empty:13Aempty:13empty:14empty:14Cempty:14empty:15empty:15Aempty:15ssc-miR-100empty:16Assc-miR-100ssc-miR-100empty:17Assc-miR-100ssc-miR-100empty:18Cssc-miR-100ssc-miR-100empty:19Cssc-miR-100ssc-miR-100empty:20Cssc-miR-100ssc-miR-100empty:21Gssc-miR-100ssc-miR-100empty:22Ussc-miR-100ssc-miR-100empty:23Assc-miR-100ssc-miR-100empty:24Gssc-miR-100ssc-miR-100empty:25Assc-miR-100ssc-miR-100empty:26Ussc-miR-100ssc-miR-100empty:27Cssc-miR-100ssc-miR-100empty:28Cssc-miR-100ssc-miR-100empty:29Gssc-miR-100ssc-miR-100empty:30Assc-miR-100ssc-miR-100empty:31Assc-miR-100ssc-miR-100empty:32Cssc-miR-100ssc-miR-100empty:33Ussc-miR-100ssc-miR-100empty:34Ussc-miR-100ssc-miR-100empty:35Gssc-miR-100ssc-miR-100empty:36Ussc-miR-100ssc-miR-100empty:37Gssc-miR-100empty:38empty:38Cempty:38empty:39empty:39Uempty:39empty:40empty:40Gempty:40empty:41empty:41Aempty:41empty:42empty:42Uempty:42empty:43empty:43Aempty:43empty:44empty:44Gempty:44empty:45empty:45Uempty:45empty:46empty:46Gempty:46empty:47empty:47Cempty:47empty:48empty:48Aempty:48empty:49empty:49Cempty:49empty:50empty:50Aempty:50empty:51empty:51Cempty:51empty:52empty:52Aempty:52empty:53empty:53Aempty:53empty:54empty:54Gempty:54empty:55empty:55Cempty:55empty:56empty:56Uempty:56empty:57empty:57Uempty:57empty:58empty:58Gempty:58empty:59empty:59Uempty:59empty:60empty:60Gempty:60empty:61empty:61Uempty:61empty:62empty:62Cempty:62empty:63empty:63Uempty:63empty:64empty:64Aempty:64empty:65empty:65Uempty:65empty:66empty:66Aempty:66empty:67empty:67Gempty:67empty:68empty:68Gempty:68empty:69empty:69Uempty:69empty:70empty:70Aempty:70empty:71empty:71Uempty:71empty:72empty:72Gempty:72empty:73empty:73Uempty:73empty:74empty:74Gempty:74empty:75empty:75Uempty:75empty:76empty:76Cempty:76empty:77empty:77Uempty:77empty:78empty:78Gempty:78empty:79empty:79Uempty:79empty:80empty:80Gempty:801020304050607080

References

Authors Journal Year Pubmed link Title
1 Nielsen et al. Anim. Genet. 2010 19917043 MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing.
2 Cho et al. Mol. Biol. Rep. 2010 20180025 Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue.
3 Li et al. J. Cell. Biochem. 2011 21312241 MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing.
4 Chen et al. BMC Genomics 2014 24499489 Exploration of microRNAs in porcine milk exosomes.
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