Precursor miRBase

ssc-mir-100 (MI0013128)

Accession MI0013128
Name ssc-mir-100
similar to following miRCarta precursors ssc-24912.1
Organism Sus scrofa
Genome Sscrofa10.2
Location chr9:54,383,382-54,383,461 (-)
miRNA ssc-miR-100
Sequence (5' -> 3')
(80 nts)
AGGCCUGUUGCCACAAACCCGUAGAUCCGAACUUGUGCUGAUAGUGCACACAAGCUUGUGUCUAUAGGUAUGUGUCUGUG
MFE -25.00 kcal/mol
first miRBase version 15.0
last miRBase version 21.0
Clusters (10 kb)
(2 precursors)
ssc-let-7a-1
ssc-mir-100
Family mir-10 (MIPF0000033)
Experiments
experiment Pubmed link
Illumina 21312241 24499489 19917043
cloned 20180025
External DBs
Gene symbol MIR100
NCBI Gene 100498766

Predicted Structure

f234d51b-eee9-4353-94c4-5c95d22ddcb5b7b938c3-feea-43e8-8dc9-63860ab29ae43c1409d1-15b6-42a4-af9f-9b56cff54415f234d51b-eee9-4353-94c4-5c95d22ddcb5db386cf2-33ce-42d1-b9be-b6158d6ae1223001e7ce-8255-4167-bc93-2e0ca59ab336f234d51b-eee9-4353-94c4-5c95d22ddcb5db386cf2-33ce-42d1-b9be-b6158d6ae122d4660911-341f-452a-bef4-9aa10ea679c35c8a708c-8c4b-4ced-92da-525a60fa2225db386cf2-33ce-42d1-b9be-b6158d6ae122d4660911-341f-452a-bef4-9aa10ea679c3d4660911-341f-452a-bef4-9aa10ea679c392f559ba-d9c4-4946-8c1d-3848b702e92892f559ba-d9c4-4946-8c1d-3848b702e92849f07d4e-7988-4cf5-b486-3a5d66fbc8e749f07d4e-7988-4cf5-b486-3a5d66fbc8e7a10f3737-162b-468a-800b-a8f80b0ef6cea10f3737-162b-468a-800b-a8f80b0ef6ce6906ef52-d4ef-4847-8b53-8a6a048571596906ef52-d4ef-4847-8b53-8a6a048571591f9755ca-67e8-4ef9-bdec-ae529b99fa505c8a708c-8c4b-4ced-92da-525a60fa2225d4660911-341f-452a-bef4-9aa10ea679c31f9755ca-67e8-4ef9-bdec-ae529b99fa505c8a708c-8c4b-4ced-92da-525a60fa22253001e7ce-8255-4167-bc93-2e0ca59ab336db386cf2-33ce-42d1-b9be-b6158d6ae1225c8a708c-8c4b-4ced-92da-525a60fa22253001e7ce-8255-4167-bc93-2e0ca59ab336b7b938c3-feea-43e8-8dc9-63860ab29ae4f234d51b-eee9-4353-94c4-5c95d22ddcb53001e7ce-8255-4167-bc93-2e0ca59ab336b7b938c3-feea-43e8-8dc9-63860ab29ae421af3928-104d-4b55-9bd2-2bce76441ab79766ef5a-473b-413f-b4a7-6deb0e312fd9b7b938c3-feea-43e8-8dc9-63860ab29ae421af3928-104d-4b55-9bd2-2bce76441ab78daac864-f77b-425c-b9e1-d5cc8d0b006c5c23463c-79ad-4397-b280-d9f635736bcf21af3928-104d-4b55-9bd2-2bce76441ab78daac864-f77b-425c-b9e1-d5cc8d0b006c3a54f467-4f55-4ed2-a0dd-f3efda6f60f0261db536-7019-469c-bcbb-e808f68e03dc8daac864-f77b-425c-b9e1-d5cc8d0b006c3a54f467-4f55-4ed2-a0dd-f3efda6f60f03a54f467-4f55-4ed2-a0dd-f3efda6f60f08f321235-6e75-43b7-86f7-3eef1238db7e8253d1a2-151f-4f00-aec3-4369578bb8dc3f26ab4d-33ef-45d9-8e39-29598d373f188f321235-6e75-43b7-86f7-3eef1238db7e8253d1a2-151f-4f00-aec3-4369578bb8dcf2983ed4-ce4d-4e1f-90c5-f39d38a5c8be16445ac6-39a9-411f-967b-800ee12be5658253d1a2-151f-4f00-aec3-4369578bb8dcf2983ed4-ce4d-4e1f-90c5-f39d38a5c8be859f84cf-dfab-4224-94ca-b0ae8e8db12e5f1acd8a-5eb2-40da-851d-9a65af897d2ef2983ed4-ce4d-4e1f-90c5-f39d38a5c8be859f84cf-dfab-4224-94ca-b0ae8e8db12e859f84cf-dfab-4224-94ca-b0ae8e8db12e434cb554-5f74-4fe3-a72e-ad7d3a6af3e9ab747e0f-641e-4988-9c73-47e58761fcefdc2d8c7d-fedc-45f4-af9b-9b2a2de8daf1434cb554-5f74-4fe3-a72e-ad7d3a6af3e9ab747e0f-641e-4988-9c73-47e58761fcefe6164026-904f-42f8-a902-d0f70f55c8a116f7a5dc-23de-42ec-8dbb-745f3b84d88fab747e0f-641e-4988-9c73-47e58761fcefe6164026-904f-42f8-a902-d0f70f55c8a14cd86923-d947-4089-b479-47b12cf89eb5c79aa8f6-d38e-4532-9721-500578e72f20e6164026-904f-42f8-a902-d0f70f55c8a14cd86923-d947-4089-b479-47b12cf89eb5a6e15d08-2119-456e-bfdd-1a3f3b40e1b6e012258f-431f-47cc-aa26-d8843538d7cd4cd86923-d947-4089-b479-47b12cf89eb5a6e15d08-2119-456e-bfdd-1a3f3b40e1b60f930166-6db3-453f-ba55-d34fc3f25fee7b7d80d5-4ee6-4d7c-8516-1c8e0e0ad5cda6e15d08-2119-456e-bfdd-1a3f3b40e1b60f930166-6db3-453f-ba55-d34fc3f25fee3908fd45-ad5c-42b3-9dae-c0023feda348ff9f6806-91b6-4781-af03-797913b6e2860f930166-6db3-453f-ba55-d34fc3f25fee3908fd45-ad5c-42b3-9dae-c0023feda3483908fd45-ad5c-42b3-9dae-c0023feda34889727128-cfef-4701-9a30-71fa14cf456fbd34daa4-18e7-4182-a548-b1667c8a6a899d6932b3-e4ec-4e1c-b7cf-04a589ad5c7e89727128-cfef-4701-9a30-71fa14cf456fbd34daa4-18e7-4182-a548-b1667c8a6a89a7dadb4d-3039-4f82-850e-efa9db38226a21326ad7-9c9f-4cbd-a8c4-15e99ac9dd36bd34daa4-18e7-4182-a548-b1667c8a6a89a7dadb4d-3039-4f82-850e-efa9db38226a97412583-9cdc-46e0-b00d-0bd5bd0485a961b25ed7-6283-4d66-9ce3-9f6c3ea06945a7dadb4d-3039-4f82-850e-efa9db38226a97412583-9cdc-46e0-b00d-0bd5bd0485a997412583-9cdc-46e0-b00d-0bd5bd0485a9033d33a3-7bcc-4129-a431-2a21870f07fa0391871b-7007-4346-9dff-3c270341f96f8e35866e-7297-4ade-9309-4b59087623bc033d33a3-7bcc-4129-a431-2a21870f07fa0391871b-7007-4346-9dff-3c270341f96f0d1b5011-7716-46f6-89ee-35f10ef778be4a169c67-6200-412a-8301-500e65d419bc0391871b-7007-4346-9dff-3c270341f96f0d1b5011-7716-46f6-89ee-35f10ef778beb64fc727-0421-4212-a5cc-c0ddc69ff3c37ebe64c6-7284-4df7-a35c-8568eb3ec0530d1b5011-7716-46f6-89ee-35f10ef778beb64fc727-0421-4212-a5cc-c0ddc69ff3c3d6675f84-b5d7-441b-9de3-7d0987dc4fc205905105-8761-4aa0-9f84-dc8896c73242b64fc727-0421-4212-a5cc-c0ddc69ff3c3d6675f84-b5d7-441b-9de3-7d0987dc4fc2777e8c52-d1fa-4cda-9db9-213fd2cd7124b2ef068d-f7ba-4a29-bca6-49154adc1709d6675f84-b5d7-441b-9de3-7d0987dc4fc2777e8c52-d1fa-4cda-9db9-213fd2cd71242e700071-f955-492d-9398-61a61e25fc45e2240a59-ec9b-4836-80bc-91e0b19caaac777e8c52-d1fa-4cda-9db9-213fd2cd71242e700071-f955-492d-9398-61a61e25fc452e700071-f955-492d-9398-61a61e25fc458cd8fe84-eda1-4e0f-aa85-f0813d37e3caed32bc4f-cfbd-422d-bc02-aaadfba36bb6c7a472c6-d60e-40a0-b555-1a0fe2aca1778cd8fe84-eda1-4e0f-aa85-f0813d37e3caed32bc4f-cfbd-422d-bc02-aaadfba36bb61438563f-46f5-4b8a-a052-7c034efb31440a085c34-30c1-45ea-accb-f06eae692acbed32bc4f-cfbd-422d-bc02-aaadfba36bb61438563f-46f5-4b8a-a052-7c034efb31441438563f-46f5-4b8a-a052-7c034efb314444dc9143-559d-4539-a423-f514fe8a21e544dc9143-559d-4539-a423-f514fe8a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1d23691eempty:1empty:1Aempty:1empty:2empty:2Gempty:2empty:3empty:3Gempty:3empty:4empty:4Cempty:4empty:5empty:5Cempty:5empty:6empty:6Uempty:6empty:7empty:7Gempty:7empty:8empty:8Uempty:8empty:9empty:9Uempty:9empty:10empty:10Gempty:10empty:11empty:11Cempty:11empty:12empty:12Cempty:12empty:13empty:13Aempty:13empty:14empty:14Cempty:14empty:15empty:15Aempty:15ssc-miR-100empty:16Assc-miR-100ssc-miR-100empty:17Assc-miR-100ssc-miR-100empty:18Cssc-miR-100ssc-miR-100empty:19Cssc-miR-100ssc-miR-100empty:20Cssc-miR-100ssc-miR-100empty:21Gssc-miR-100ssc-miR-100empty:22Ussc-miR-100ssc-miR-100empty:23Assc-miR-100ssc-miR-100empty:24Gssc-miR-100ssc-miR-100empty:25Assc-miR-100ssc-miR-100empty:26Ussc-miR-100ssc-miR-100empty:27Cssc-miR-100ssc-miR-100empty:28Cssc-miR-100ssc-miR-100empty:29Gssc-miR-100ssc-miR-100empty:30Assc-miR-100ssc-miR-100empty:31Assc-miR-100ssc-miR-100empty:32Cssc-miR-100ssc-miR-100empty:33Ussc-miR-100ssc-miR-100empty:34Ussc-miR-100ssc-miR-100empty:35Gssc-miR-100ssc-miR-100empty:36Ussc-miR-100ssc-miR-100empty:37Gssc-miR-100empty:38empty:38Cempty:38empty:39empty:39Uempty:39empty:40empty:40Gempty:40empty:41empty:41Aempty:41empty:42empty:42Uempty:42empty:43empty:43Aempty:43empty:44empty:44Gempty:44empty:45empty:45Uempty:45empty:46empty:46Gempty:46empty:47empty:47Cempty:47empty:48empty:48Aempty:48empty:49empty:49Cempty:49empty:50empty:50Aempty:50empty:51empty:51Cempty:51empty:52empty:52Aempty:52empty:53empty:53Aempty:53empty:54empty:54Gempty:54empty:55empty:55Cempty:55empty:56empty:56Uempty:56empty:57empty:57Uempty:57empty:58empty:58Gempty:58empty:59empty:59Uempty:59empty:60empty:60Gempty:60empty:61empty:61Uempty:61empty:62empty:62Cempty:62empty:63empty:63Uempty:63empty:64empty:64Aempty:64empty:65empty:65Uempty:65empty:66empty:66Aempty:66empty:67empty:67Gempty:67empty:68empty:68Gempty:68empty:69empty:69Uempty:69empty:70empty:70Aempty:70empty:71empty:71Uempty:71empty:72empty:72Gempty:72empty:73empty:73Uempty:73empty:74empty:74Gempty:74empty:75empty:75Uempty:75empty:76empty:76Cempty:76empty:77empty:77Uempty:77empty:78empty:78Gempty:78empty:79empty:79Uempty:79empty:80empty:80Gempty:801020304050607080

References

Authors Journal Year Pubmed link Title
1 Nielsen et al. Anim. Genet. 2010 19917043 MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing.
2 Cho et al. Mol. Biol. Rep. 2010 20180025 Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue.
3 Li et al. J. Cell. Biochem. 2011 21312241 MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing.
4 Chen et al. BMC Genomics 2014 24499489 Exploration of microRNAs in porcine milk exosomes.
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