Precursor miRBase

rno-mir-544 (MI0012593)

Accession MI0012593
Name rno-mir-544
similar to following miRCarta precursors rno-29553-25243.1
Organism Rattus norvegicus
Genome Rnor_5.0
Location chr6:143,041,526-143,041,603 (+)
miRNA rno-miR-544-5p
miRNA rno-miR-544-3p
Sequence (5' -> 3')
(78 nts)
CACCUAGGGAUCUUGUUAAAAAGCAGAUUCUGAUUGAGGGACCAAGAUUCUGCAUUUUUAGCAAGCUCUCAAGUGAUG
MFE -27.00 kcal/mol
first miRBase version 14.0
last miRBase version 21.0
Clusters (10 kb)
(18 precursors)
rno-mir-667
rno-mir-376c
rno-mir-376b
rno-mir-3595
rno-mir-376a
rno-mir-300
rno-mir-381
rno-mir-487b
rno-mir-3576
rno-mir-539
rno-mir-6331
rno-mir-544
rno-mir-3592
rno-mir-382
rno-mir-134
rno-mir-668
rno-mir-485
rno-mir-154
Family mir-544 (MIPF0000436)
Experiments
experiment Pubmed link
SOLiD 20403161
External DBs
Gene symbol Mir544
NCBI Gene 100314128

Predicted Structure

3dd03bbf-8473-4c4f-8b34-9da8638b9cd13c8c4043-2313-42a6-8978-0b0fa2be27d6f7c42197-9823-4073-a5a1-c3f0628c3d3d3ff3b98f-b3e3-4faa-849b-ddaed908e9533dd03bbf-8473-4c4f-8b34-9da8638b9cd1f7c42197-9823-4073-a5a1-c3f0628c3d3d9957335c-a661-41ec-90ac-e5452affca7092cfe5a6-f5b6-44bd-8ab4-ae426eba8314f7c42197-9823-4073-a5a1-c3f0628c3d3d9957335c-a661-41ec-90ac-e5452affca709957335c-a661-41ec-90ac-e5452affca7069f3598d-b371-4678-a012-f59bbcb2af5369f3598d-b371-4678-a012-f59bbcb2af537a1ad411-89df-43fc-9055-1f73e94102127a1ad411-89df-43fc-9055-1f73e9410212c2c501f5-e7d0-485f-8d5b-71ff9b467fc14bd14a31-10af-4a5c-8d19-3875abd3bcafd415c8fe-0cf0-4371-887f-ad333b168fffc2c501f5-e7d0-485f-8d5b-71ff9b467fc14bd14a31-10af-4a5c-8d19-3875abd3bcafcef9578f-daa6-47ef-b195-b2424630db37b79c303d-5b24-4f41-aee6-4d287d6a62e24bd14a31-10af-4a5c-8d19-3875abd3bcafcef9578f-daa6-47ef-b195-b2424630db37475a6906-47aa-4baf-b58d-1a3c5ddafcdfc0093851-5e9f-4dfe-bcbd-954dce1b2334cef9578f-daa6-47ef-b195-b2424630db37475a6906-47aa-4baf-b58d-1a3c5ddafcdfed97cc2b-df42-4ae6-aa08-d58fcb1fc227ca26a045-f1aa-4805-a9a3-8b80ebced998475a6906-47aa-4baf-b58d-1a3c5ddafcdfed97cc2b-df42-4ae6-aa08-d58fcb1fc227ed97cc2b-df42-4ae6-aa08-d58fcb1fc2274decc2b6-8731-47fc-bdb5-733ce879a2bed01967bb-986b-42fc-b5d6-a6983bfe38f139824c0b-33e7-4608-8fb9-5b76504c1bc44decc2b6-8731-47fc-bdb5-733ce879a2bed01967bb-986b-42fc-b5d6-a6983bfe38f18bfbbb4d-7b7f-4620-a1a9-214013e0aa6bc8351653-edcc-4091-ab45-efd756831904d01967bb-986b-42fc-b5d6-a6983bfe38f18bfbbb4d-7b7f-4620-a1a9-214013e0aa6b912b8c24-84e6-461a-afeb-96390074ff42e624deff-cd7a-4bdd-aba8-699b7de2420b8bfbbb4d-7b7f-4620-a1a9-214013e0aa6b912b8c24-84e6-461a-afeb-96390074ff4297d11ee3-9316-4cc0-9c4f-2ae2d20f3d130e365e34-f04d-49b5-81f4-003461b2b6af912b8c24-84e6-461a-afeb-96390074ff4297d11ee3-9316-4cc0-9c4f-2ae2d20f3d13d9c0e57a-54de-4508-b3f3-cbce57fece47ac5f9408-4442-40b6-bdec-d9196023579c97d11ee3-9316-4cc0-9c4f-2ae2d20f3d13d9c0e57a-54de-4508-b3f3-cbce57fece4721326d77-4794-4701-9b22-07e01704521ecf8bf402-79e5-4afb-afbb-881e81594db5d9c0e57a-54de-4508-b3f3-cbce57fece4721326d77-4794-4701-9b22-07e01704521e2a7b7b30-f1f7-48cc-ba49-22166dab07d67dc02b15-2849-4473-9182-3835c3623bcf21326d77-4794-4701-9b22-07e01704521e2a7b7b30-f1f7-48cc-ba49-22166dab07d643e57f65-9515-4152-b53b-ef5cffcf265db7f21ee2-1a1c-430e-a6fd-a36ad222bd042a7b7b30-f1f7-48cc-ba49-22166dab07d643e57f65-9515-4152-b53b-ef5cffcf265d3af01fec-637c-4652-beb6-9ed90bc305ab766c237c-f415-4d9b-99ac-b95919b51c9d43e57f65-9515-4152-b53b-ef5cffcf265d3af01fec-637c-4652-beb6-9ed90bc305ab1425962d-1337-4773-9ce9-62f3e4572407b4047c8e-b710-495d-af1b-d72940c926fa3af01fec-637c-4652-beb6-9ed90bc305ab1425962d-1337-4773-9ce9-62f3e4572407a217a080-3875-4511-936b-ad19f4a4d546acd60a66-096f-4c07-b2a2-24a70ba6db631425962d-1337-4773-9ce9-62f3e4572407a217a080-3875-4511-936b-ad19f4a4d54631d4e0bc-d4bc-4354-840b-146f212d87f2d44c7f4b-09c7-4d18-8400-7af1884762efa217a080-3875-4511-936b-ad19f4a4d54631d4e0bc-d4bc-4354-840b-146f212d87f28ff6f49b-1a3f-4a49-b346-830452bd32d2b4ffeee5-8635-472a-8f69-f115d36f233231d4e0bc-d4bc-4354-840b-146f212d87f28ff6f49b-1a3f-4a49-b346-830452bd32d294a4eaa0-1910-4124-99a5-882e2a88322600dac987-f4d1-4312-830e-6646b70df80a8ff6f49b-1a3f-4a49-b346-830452bd32d294a4eaa0-1910-4124-99a5-882e2a8832265e84435b-d990-4623-a7b9-b0a69208b93ec23593c1-fe23-4cc4-bcda-1c34559d045894a4eaa0-1910-4124-99a5-882e2a8832265e84435b-d990-4623-a7b9-b0a69208b93ee889b2dd-217b-45b9-96af-96b5e00f3f6e66f253fc-c9bb-472d-83d9-345c1b5396575e84435b-d990-4623-a7b9-b0a69208b93ee889b2dd-217b-45b9-96af-96b5e00f3f6ee889b2dd-217b-45b9-96af-96b5e00f3f6e0df387ee-871f-4faf-bcda-a4c448c80d302d95f367-0cec-4a1e-95d0-636ea80f0036316c2398-d202-425e-bf50-244801ef595c0df387ee-871f-4faf-bcda-a4c448c80d302d95f367-0cec-4a1e-95d0-636ea80f003667221e6b-97f7-455e-8490-a59027ef0753e48def92-52f8-4e31-9d7d-f6341467ec9e2d95f367-0cec-4a1e-95d0-636ea80f003667221e6b-97f7-455e-8490-a59027ef075334e52f27-176f-4ef8-ba52-a9e394b9ddd873de42ad-199a-4460-bd25-8dad0b7507b467221e6b-97f7-455e-8490-a59027ef075334e52f27-176f-4ef8-ba52-a9e394b9ddd834e52f27-176f-4ef8-ba52-a9e394b9ddd865bd8087-e03d-4a1d-8e6f-1ee1b379518a65bd8087-e03d-4a1d-8e6f-1ee1b379518a55149eb3-d36a-4a85-9afc-c07e0b3df7cb55149eb3-d36a-4a85-9afc-c07e0b3df7cbcf500087-4fb9-483c-b4d7-4e97bbbf31c6cf500087-4fb9-483c-b4d7-4e97bbbf31c6dfac53a5-7172-4663-a844-16e88a06c165dfac53a5-7172-4663-a844-16e88a06c165696d3ee8-4167-4324-a7c2-e50073b5586a696d3ee8-4167-4324-a7c2-e50073b5586af23997fc-5789-48d6-9b6f-5f95c2f560ddf23997fc-5789-48d6-9b6f-5f95c2f560dd68eeccfb-7996-4878-8238-122bbc1e1e4d68eeccfb-7996-4878-8238-122bbc1e1e4d9cd70706-0db8-4869-910c-a27a275f67499cd70706-0db8-4869-910c-a27a275f67491969d582-e1b9-4859-9640-11a3d8898c061969d582-e1b9-4859-9640-11a3d8898c060053d238-9f4f-4404-8dd3-a741689a5c910053d238-9f4f-4404-8dd3-a741689a5c916fc5817a-4176-46f0-9574-1fdefc1871496fc5817a-4176-46f0-9574-1fdefc187149a49e98c7-2c6b-404a-b21b-50d31ffd05b3a49e98c7-2c6b-404a-b21b-50d31ffd05b33b6d6f35-cc96-4ea3-b193-dd995cbf6da373de42ad-199a-4460-bd25-8dad0b75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pty:10Aempty:10empty:11empty:11Uempty:11rno-miR-544-5pempty:12Crno-miR-544-5prno-miR-544-5pempty:13Urno-miR-544-5prno-miR-544-5pempty:14Urno-miR-544-5prno-miR-544-5pempty:15Grno-miR-544-5prno-miR-544-5pempty:16Urno-miR-544-5prno-miR-544-5pempty:17Urno-miR-544-5prno-miR-544-5pempty:18Arno-miR-544-5prno-miR-544-5pempty:19Arno-miR-544-5prno-miR-544-5pempty:20Arno-miR-544-5prno-miR-544-5pempty:21Arno-miR-544-5prno-miR-544-5pempty:22Arno-miR-544-5prno-miR-544-5pempty:23Grno-miR-544-5prno-miR-544-5pempty:24Crno-miR-544-5prno-miR-544-5pempty:25Arno-miR-544-5prno-miR-544-5pempty:26Grno-miR-544-5prno-miR-544-5pempty:27Arno-miR-544-5prno-miR-544-5pempty:28Urno-miR-544-5prno-miR-544-5pempty:29Urno-miR-544-5prno-miR-544-5pempty:30Crno-miR-544-5prno-miR-544-5pempty:31Urno-miR-544-5pempty:32empty:32Gempty:32empty:33empty:33Aempty:33empty:34empty:34Uempty:34empty:35empty:35Uempty:35empty:36empty:36Gempty:36empty:37empty:37Aempty:37empty:38empty:38Gempty:38empty:39empty:39Gempty:39empty:40empty:40Gempty:40empty:41empty:41Aempty:41empty:42empty:42Cempty:42empty:43empty:43Cempty:43empty:44empty:44Aempty:44empty:45empty:45Aempty:45empty:46empty:46Gempty:46rno-miR-544-3pempty:47Arno-miR-544-3prno-miR-544-3pempty:48Urno-miR-544-3prno-miR-544-3pempty:49Urno-miR-544-3prno-miR-544-3pempty:50Crno-miR-544-3prno-miR-544-3pempty:51Urno-miR-544-3prno-miR-544-3pempty:52Grno-miR-544-3prno-miR-544-3pempty:53Crno-miR-544-3prno-miR-544-3pempty:54Arno-miR-544-3prno-miR-544-3pempty:55Urno-miR-544-3prno-miR-544-3pempty:56Urno-miR-544-3prno-miR-544-3pempty:57Urno-miR-544-3prno-miR-544-3pempty:58Urno-miR-544-3prno-miR-544-3pempty:59Urno-miR-544-3prno-miR-544-3pempty:60Arno-miR-544-3prno-miR-544-3pempty:61Grno-miR-544-3prno-miR-544-3pempty:62Crno-miR-544-3prno-miR-544-3pempty:63Arno-miR-544-3prno-miR-544-3pempty:64Arno-miR-544-3prno-miR-544-3pempty:65Grno-miR-544-3prno-miR-544-3pempty:66Crno-miR-544-3prno-miR-544-3pempty:67Urno-miR-544-3pempty:68empty:68Cempty:68empty:69empty:69Uempty:69empty:70empty:70Cempty:70empty:71empty:71Aempty:71empty:72empty:72Aempty:72empty:73empty:73Gempty:73empty:74empty:74Uempty:74empty:75empty:75Gempty:75empty:76empty:76Aempty:76empty:77empty:77Uempty:77empty:78empty:78Gempty:7810203040506070

References

Authors Journal Year Pubmed link Title
1 Artzi et al. BMC Bioinformatics 2008 18215311 miRNAminer: a tool for homologous microRNA gene search.
2 Linsen et al. BMC Genomics 2010 20403161 Small RNA expression and strain specificity in the rat.
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