Precursor miRBase

rno-mir-544 (MI0012593)

Accession MI0012593
Name rno-mir-544
similar to following miRCarta precursors rno-29553-25243.1
Organism Rattus norvegicus
Genome Rnor_5.0
Location chr6:143,041,526-143,041,603 (+)
miRNA rno-miR-544-5p
miRNA rno-miR-544-3p
Sequence (5' -> 3')
(78 nts)
CACCUAGGGAUCUUGUUAAAAAGCAGAUUCUGAUUGAGGGACCAAGAUUCUGCAUUUUUAGCAAGCUCUCAAGUGAUG
MFE -27.00 kcal/mol
first miRBase version 14.0
last miRBase version 21.0
Clusters (10 kb)
(18 precursors)
rno-mir-667
rno-mir-376c
rno-mir-376b
rno-mir-3595
rno-mir-376a
rno-mir-300
rno-mir-381
rno-mir-487b
rno-mir-3576
rno-mir-539
rno-mir-6331
rno-mir-544
rno-mir-3592
rno-mir-382
rno-mir-134
rno-mir-668
rno-mir-485
rno-mir-154
Family mir-544 (MIPF0000436)
Experiments
experiment Pubmed link
SOLiD 20403161
External DBs
Gene symbol Mir544
NCBI Gene 100314128

Predicted Structure

83286c24-0506-476f-bf14-24d2c3aff072a2a09177-554d-4daf-bc6e-0ee12cbf814410afc2fe-aa11-4e3f-a5f1-133e9a69a211e2270eae-433c-41d7-b1a4-8bc120866a6c83286c24-0506-476f-bf14-24d2c3aff07210afc2fe-aa11-4e3f-a5f1-133e9a69a211b64df73d-bd1b-4c57-bf76-4a31a1cd96cd6ee8caf8-38d2-4cff-aa13-57a80441aced10afc2fe-aa11-4e3f-a5f1-133e9a69a211b64df73d-bd1b-4c57-bf76-4a31a1cd96cdb64df73d-bd1b-4c57-bf76-4a31a1cd96cd75b1bfce-6248-43bb-9a4c-d45f8a59d3ea75b1bfce-6248-43bb-9a4c-d45f8a59d3ea13bbea0c-df04-4e3b-b894-101b2e59fad513bbea0c-df04-4e3b-b894-101b2e59fad5f0e185bc-a7a1-4135-bebe-e8f84fa5e6e46b41bde7-edd8-4ad8-90c7-0a52bd6eed6e758e4f3e-e79d-4391-9a0c-9b2b01c4b7eaf0e185bc-a7a1-4135-bebe-e8f84fa5e6e46b41bde7-edd8-4ad8-90c7-0a52bd6eed6e946afb2d-9520-4279-859c-093294c8dadbaf307810-782b-4d78-94bb-f16b131dcafc6b41bde7-edd8-4ad8-90c7-0a52bd6eed6e946afb2d-9520-4279-859c-093294c8dadb993b1b9a-a52e-4691-a8b0-9a48dbcdf33cd89fa66e-f6bd-40bb-beb6-79a2bce37824946afb2d-9520-4279-859c-093294c8dadb993b1b9a-a52e-4691-a8b0-9a48dbcdf33c2bf56e69-3160-4fa0-b900-4fe615389d9602a0e783-a218-452d-a39a-6e1cc5902336993b1b9a-a52e-4691-a8b0-9a48dbcdf33c2bf56e69-3160-4fa0-b900-4fe615389d962bf56e69-3160-4fa0-b900-4fe615389d96d02f925f-94a3-44c6-b155-ca3d237a9f2d0044f562-1dc8-40c1-94a9-71e86cbed8a4e63a08b3-521c-4d8c-b756-f3f301d19b80d02f925f-94a3-44c6-b155-ca3d237a9f2d0044f562-1dc8-40c1-94a9-71e86cbed8a4c24536b6-ce38-46eb-830f-1470d8d9eb15648be633-2974-4f45-aa49-0312d43103ff0044f562-1dc8-40c1-94a9-71e86cbed8a4c24536b6-ce38-46eb-830f-1470d8d9eb151a368826-0371-40bf-8a3f-e80e42f425f1e87c870e-1fcd-4362-9567-0d29e2ef12acc24536b6-ce38-46eb-830f-1470d8d9eb151a368826-0371-40bf-8a3f-e80e42f425f1da8bcc12-0c72-4c66-93dd-d233d4098263613b65b0-22d3-4a7a-a3f5-afbec877c07a1a368826-0371-40bf-8a3f-e80e42f425f1da8bcc12-0c72-4c66-93dd-d233d4098263a86f68b2-a6cf-427c-9fff-4ca3897690cd1646c3da-4b2b-4921-a548-cb9176bf4440da8bcc12-0c72-4c66-93dd-d233d4098263a86f68b2-a6cf-427c-9fff-4ca3897690cd97d5dc6a-637d-417b-a997-8c8fe723dcfe73c5f17d-0216-4a7d-980f-3e90c0982462a86f68b2-a6cf-427c-9fff-4ca3897690cd97d5dc6a-637d-417b-a997-8c8fe723dcfef78a92cb-84f6-425c-b197-43ab42e087f15f0d4d4a-555f-4a94-b9fb-87fd820c4d2e97d5dc6a-637d-417b-a997-8c8fe723dcfef78a92cb-84f6-425c-b197-43ab42e087f154bbd134-d9e2-421d-8b67-b1e78f547807fd750426-86c1-4fe7-97ac-34edd2c73389f78a92cb-84f6-425c-b197-43ab42e087f154bbd134-d9e2-421d-8b67-b1e78f5478074d330e57-b905-4a58-9299-a4b99737cb9eec245100-21d6-4971-a79f-a238e34cd4e854bbd134-d9e2-421d-8b67-b1e78f5478074d330e57-b905-4a58-9299-a4b99737cb9efb13ed7d-3dd8-477a-8c5f-7d9d54d3cd0fa57082a7-b28a-42bf-ac93-2970513def4d4d330e57-b905-4a58-9299-a4b99737cb9efb13ed7d-3dd8-477a-8c5f-7d9d54d3cd0f185a473c-57f1-491c-84f2-685ea747e371a4bdf65e-2c7a-42bc-a99f-c8e045448f4afb13ed7d-3dd8-477a-8c5f-7d9d54d3cd0f185a473c-57f1-491c-84f2-685ea747e3716c49cb92-95ee-42f6-a5b1-78701987d5726f68b62a-ed38-4217-a857-29cf73bc2dcb185a473c-57f1-491c-84f2-685ea747e3716c49cb92-95ee-42f6-a5b1-78701987d57217328199-a74d-4222-aeab-03fab2db4dd73129345a-55e5-4e9e-9855-c83d5c49622e6c49cb92-95ee-42f6-a5b1-78701987d57217328199-a74d-4222-aeab-03fab2db4dd7550cf744-2687-42fd-a073-58510de52a44410406a2-fae2-4c24-a4b2-b9e3879b579b17328199-a74d-4222-aeab-03fab2db4dd7550cf744-2687-42fd-a073-58510de52a44aa8d7fbb-32e7-4b53-8887-851743328077b3ee3bb0-0cdc-4e72-8749-94a1faa8c3a7550cf744-2687-42fd-a073-58510de52a44aa8d7fbb-32e7-4b53-8887-851743328077ecc48e1d-f28b-4365-8992-785336d15861514b1225-6b91-47fc-8cf9-2017cb2c6e93aa8d7fbb-32e7-4b53-8887-851743328077ecc48e1d-f28b-4365-8992-785336d15861ecc48e1d-f28b-4365-8992-785336d15861f07248ec-7856-4b76-bd52-d76a0cc26727c63dad7e-2eef-4784-a9bd-a174ae1161d5773d5491-7e85-4a93-ace6-556c0aeb0200f07248ec-7856-4b76-bd52-d76a0cc26727c63dad7e-2eef-4784-a9bd-a174ae1161d5166b03ce-5187-4d89-92f1-ee372c08f9dbcbbf06fe-e4c5-4655-9e58-c49d572ee980c63dad7e-2eef-4784-a9bd-a174ae1161d5166b03ce-5187-4d89-92f1-ee372c08f9dbc5080765-5663-4985-a2a2-65efa94fa35ab627bbd1-2672-40a4-84e7-405b9df86f40166b03ce-5187-4d89-92f1-ee372c08f9dbc5080765-5663-4985-a2a2-65efa94fa35ac5080765-5663-4985-a2a2-65efa94fa35aa07b77d8-b14f-4ad2-bea8-86de7d890eb9a07b77d8-b14f-4ad2-bea8-86de7d890eb937b4af09-f859-4b9f-b588-3e13396ba1fa37b4af09-f859-4b9f-b588-3e13396ba1faba0ac60f-2f4c-4920-b0ba-af1c7149b3fcba0ac60f-2f4c-4920-b0ba-af1c7149b3fc85ab9d5e-8bf6-415f-a316-73f24517b97c85ab9d5e-8bf6-415f-a316-73f24517b97c8aa7f429-7afc-4877-8571-09d1aedf8b9d8aa7f429-7afc-4877-8571-09d1aedf8b9d8ef964ee-28a0-4526-9d56-2c28a536b4598ef964ee-28a0-4526-9d56-2c28a536b45918da2028-c338-48ec-836f-0d8f3499e80718da2028-c338-48ec-836f-0d8f3499e80765f85ded-73c8-43d9-8674-90953630bf6865f85ded-73c8-43d9-8674-90953630bf6888c1efbb-4890-43a2-b56a-bcadf932521388c1efbb-4890-43a2-b56a-bcadf93252138ec696e1-0149-472f-8b28-8af3260ed77e8ec696e1-0149-472f-8b28-8af3260ed77eee813327-1017-4f74-b553-c386b5829a6aee813327-1017-4f74-b553-c386b5829a6a88b27a3d-fc5d-4461-a813-d93bc95a9b4988b27a3d-fc5d-4461-a813-d93bc95a9b4975d63b03-0870-45be-9ddc-a4097837b57fb627bbd1-2672-40a4-84e7-405b9df8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pty:10Aempty:10empty:11empty:11Uempty:11rno-miR-544-5pempty:12Crno-miR-544-5prno-miR-544-5pempty:13Urno-miR-544-5prno-miR-544-5pempty:14Urno-miR-544-5prno-miR-544-5pempty:15Grno-miR-544-5prno-miR-544-5pempty:16Urno-miR-544-5prno-miR-544-5pempty:17Urno-miR-544-5prno-miR-544-5pempty:18Arno-miR-544-5prno-miR-544-5pempty:19Arno-miR-544-5prno-miR-544-5pempty:20Arno-miR-544-5prno-miR-544-5pempty:21Arno-miR-544-5prno-miR-544-5pempty:22Arno-miR-544-5prno-miR-544-5pempty:23Grno-miR-544-5prno-miR-544-5pempty:24Crno-miR-544-5prno-miR-544-5pempty:25Arno-miR-544-5prno-miR-544-5pempty:26Grno-miR-544-5prno-miR-544-5pempty:27Arno-miR-544-5prno-miR-544-5pempty:28Urno-miR-544-5prno-miR-544-5pempty:29Urno-miR-544-5prno-miR-544-5pempty:30Crno-miR-544-5prno-miR-544-5pempty:31Urno-miR-544-5pempty:32empty:32Gempty:32empty:33empty:33Aempty:33empty:34empty:34Uempty:34empty:35empty:35Uempty:35empty:36empty:36Gempty:36empty:37empty:37Aempty:37empty:38empty:38Gempty:38empty:39empty:39Gempty:39empty:40empty:40Gempty:40empty:41empty:41Aempty:41empty:42empty:42Cempty:42empty:43empty:43Cempty:43empty:44empty:44Aempty:44empty:45empty:45Aempty:45empty:46empty:46Gempty:46rno-miR-544-3pempty:47Arno-miR-544-3prno-miR-544-3pempty:48Urno-miR-544-3prno-miR-544-3pempty:49Urno-miR-544-3prno-miR-544-3pempty:50Crno-miR-544-3prno-miR-544-3pempty:51Urno-miR-544-3prno-miR-544-3pempty:52Grno-miR-544-3prno-miR-544-3pempty:53Crno-miR-544-3prno-miR-544-3pempty:54Arno-miR-544-3prno-miR-544-3pempty:55Urno-miR-544-3prno-miR-544-3pempty:56Urno-miR-544-3prno-miR-544-3pempty:57Urno-miR-544-3prno-miR-544-3pempty:58Urno-miR-544-3prno-miR-544-3pempty:59Urno-miR-544-3prno-miR-544-3pempty:60Arno-miR-544-3prno-miR-544-3pempty:61Grno-miR-544-3prno-miR-544-3pempty:62Crno-miR-544-3prno-miR-544-3pempty:63Arno-miR-544-3prno-miR-544-3pempty:64Arno-miR-544-3prno-miR-544-3pempty:65Grno-miR-544-3prno-miR-544-3pempty:66Crno-miR-544-3prno-miR-544-3pempty:67Urno-miR-544-3pempty:68empty:68Cempty:68empty:69empty:69Uempty:69empty:70empty:70Cempty:70empty:71empty:71Aempty:71empty:72empty:72Aempty:72empty:73empty:73Gempty:73empty:74empty:74Uempty:74empty:75empty:75Gempty:75empty:76empty:76Aempty:76empty:77empty:77Uempty:77empty:78empty:78Gempty:7810203040506070

References

Authors Journal Year Pubmed link Title
1 Artzi et al. BMC Bioinformatics 2008 18215311 miRNAminer: a tool for homologous microRNA gene search.
2 Linsen et al. BMC Genomics 2010 20403161 Small RNA expression and strain specificity in the rat.
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