Precursor miRBase

bta-mir-541 (MI0009858)

Accession MI0009858
Name bta-mir-541
similar to following miRCarta precursors bta-27901.1
Organism Bos taurus
Genome UMD3.1
Location chr21:67,602,344-67,602,427 (+)
miRNA bta-miR-541
Sequence (5' -> 3')
(84 nts)
ACGUCAGGGAAAGGAUUCUGCUGUCGGUCCCACUCCAAAGUUCAAAAAAUGGGUGGUGGGCACAGAAUCCGGCCUCUGCUUGUG
MFE -31.10 kcal/mol
first miRBase version 13.0
last miRBase version 21.0
Clusters (10 kb)
(17 precursors)
bta-mir-3578
bta-mir-382
bta-mir-134
bta-mir-485
bta-mir-453
bta-mir-154a
bta-mir-154b
bta-mir-496
bta-mir-377
bta-mir-541
bta-mir-3957
bta-mir-409a
bta-mir-409b
bta-mir-412
bta-mir-369
bta-mir-410
bta-mir-656
Family mir-541 (MIPF0000213)
Experiments
experiment Pubmed link
qRT-PCR 19170227
microarray 19170227
External DBs
Gene symbol MIR541
NCBI Gene 100313266

Predicted Structure

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References

Authors Journal Year Pubmed link Title
1 Artzi et al. BMC Bioinformatics 2008 18215311 miRNAminer: a tool for homologous microRNA gene search.
2 Strozzi et al. Anim. Genet. 2009 18945293 Annotation of 390 bovine miRNA genes by sequence similarity with other species.
3 Tesfaye et al. Mol. Reprod. Dev. 2009 19170227 Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach.
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