| Accession | MI0009857 | ||||
| Name | bta-mir-539 | ||||
| similar to following miRCarta precursors | bta-433.1 | ||||
| Organism | Bos taurus | ||||
| Genome | UMD3.1 | ||||
| Location |
chr21:67,584,372-67,584,449 (+) |
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| miRNA | bta-miR-539 | ||||
| Sequence (5' -> 3') (78 nts) |
AUACUUGAGGAGAAAUUAUCCUUGGUGUGUUCGCUUUAUUUGGGAUGAAUCAUACAAGGACAAUUUCUUUCUGAGUAU | ||||
| MFE | -26.80 kcal/mol | ||||
| first miRBase version | 13.0 | ||||
| last miRBase version | 21.0 | ||||
| Clusters (10 kb) (20 precursors) |
bta-mir-154c
bta-mir-376e bta-mir-376c bta-mir-376d bta-mir-654 bta-mir-376b bta-mir-376a bta-mir-1185 bta-mir-3956 bta-mir-381 bta-mir-487b bta-mir-539 bta-mir-544a bta-mir-655 bta-mir-411c bta-mir-487a bta-mir-3578 bta-mir-382 bta-mir-134 bta-mir-485 |
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| Family | mir-154 (MIPF0000018) | ||||
| Experiments |
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| External DBs |
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| Authors | Journal | Year | Pubmed link | Title | |
|---|---|---|---|---|---|
| 1 | Artzi et al. | BMC Bioinformatics | 2008 | 18215311 | miRNAminer: a tool for homologous microRNA gene search. |
| 2 | Strozzi et al. | Anim. Genet. | 2009 | 18945293 | Annotation of 390 bovine miRNA genes by sequence similarity with other species. |
| 3 | Jin et al. | BMC Mol. Biol. | 2009 | 19758457 | Characterization of bovine miRNAs by sequencing and bioinformatics analysis. |