Precursor miRBase

gga-mir-454 (MI0006984)

Accession MI0006984
Name gga-mir-454
similar to following miRCarta precursors gga-26705-25840.1
Organism Gallus gallus
Genome Gallus-gallus-4.0
Location chr15:391,656-391,776 (-)
miRNA gga-miR-454-5p
miRNA gga-miR-454-3p
Sequence (5' -> 3')
(121 nts)
CCAUUAUCCAGCUUCCUAACCUUAAGGAUGAGACCCUAUCAAUAUUGCCUCUGCUUUUGUGCUCAGGGUAGUAGUGCAAUAUUGCUUAUAGGGUCUUUUCUUUUGAGGGUAUUCUUCAUGG
MFE -42.90 kcal/mol
first miRBase version 12.0
last miRBase version 21.0
Clusters (10 kb)
(4 precursors)
gga-mir-130b
gga-mir-454
gga-mir-301a
gga-mir-130a
Family mir-454 (MIPF0000174)
Experiments
experiment Pubmed link
Illumina 18469162
cloned 18256158 18463306

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Yao et al. J. Virol. 2008 18256158 MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs.
2 Glazov et al. Genome Res. 2008 18469162 A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach.
3 Murchison et al. Genome Res. 2008 18463306 Conservation of small RNA pathways in platypus.