Precursor miRBase

cfa-mir-542 (MI0008171)

Accession MI0008171
Name cfa-mir-542
similar to following miRCarta precursors cfa-136.1
Organism Canis familiaris
Genome CanFam3.1
Location chrX:105,178,359-105,178,417 (-)
miRNA cfa-miR-542
Sequence (5' -> 3')
(59 nts)
UCGGGGAUCAUCAUGUCACGAGAUACCACUGUGCACUUGUGACAGAUUGAUAACUGAAA
MFE -22.00 kcal/mol
first miRBase version 11.0
last miRBase version 21.0
Clusters (10 kb)
(5 precursors)
cfa-mir-450b
cfa-mir-450a
cfa-mir-542
cfa-mir-503
cfa-mir-424
Family mir-542 (MIPF0000185)
Experiments
experiment Pubmed link
Illumina 18392026
External DBs
Gene symbol MIR542
NCBI Gene 100886144

Predicted Structure

References

Authors Journal Year Pubmed link Title
1 Friedländer et al. Nat. Biotechnol. 2008 18392026 Discovering microRNAs from deep sequencing data using miRDeep.